Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_C15
         (754 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              23   2.3  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    23   3.1  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    22   5.4  
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              22   7.1  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    21   9.4  
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              21   9.4  

>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 675 MRHLIIMFLLCVCRGGCAXE 734
           M+  +I+F +CVC G    E
Sbjct: 1   MKTFVIIFAICVCVGAMTHE 20


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = +1

Query: 427 KNQPYLVSQYRLKAYLSLIR 486
           KN P+ V Q+R K +++++R
Sbjct: 64  KNYPFDVDQWRDKTFVTILR 83


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 174 EGYVPQEEVPLYESKGKQFRARQNDGLPVG 263
           E +   EE  L  SK K+  +  ND LP+G
Sbjct: 440 EAHWELEEESLQGSKIKESNSCSNDQLPMG 469


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 675 MRHLIIMFLLCVCRGGCAXEMF 740
           M+  +I+  +CVC G    E F
Sbjct: 1   MKTFVIISAICVCVGALTLEEF 22


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = +2

Query: 65  YYNVNTNG 88
           YYNVN+NG
Sbjct: 455 YYNVNSNG 462


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 675 MRHLIIMFLLCVCRGGCAXE 734
           M+ ++++F  CVC G    E
Sbjct: 1   MKTIVLIFGFCVCVGALTIE 20


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,038
Number of Sequences: 438
Number of extensions: 3361
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)