Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_C13
(790 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0724 - 35757228-35757323,35757837-35757893,35757983-357580... 72 5e-13
06_01_0082 + 656362-657798 31 1.4
01_01_0272 - 2249662-2249721,2250110-2250335,2250419-2250615,225... 31 1.4
08_01_0618 - 5394841-5395036,5395179-5395244,5395727-5395769,539... 30 1.8
07_01_1104 - 10160493-10160599,10160632-10160637,10160930-101609... 30 2.4
02_01_0625 + 4690607-4690696,4692673-4692734,4692867-4693230 30 2.4
08_01_0626 - 5445676-5446687,5447099-5447430 29 3.2
08_01_0175 - 1497700-1498459,1498546-1499939 29 3.2
05_02_0135 - 6965294-6965875 29 3.2
03_05_0261 - 22470565-22470714,22472101-22474270,22474368-224745... 29 3.2
03_04_0130 + 17543991-17545758,17545889-17545971,17546396-17546467 29 3.2
03_02_0619 + 9904405-9904586,9905315-9906764,9907320-9907509,990... 29 3.2
02_05_0958 + 33073302-33073442,33073839-33073913,33074382-330744... 29 3.2
11_06_0289 - 21969248-21973516 29 4.2
04_04_1475 + 33856351-33856582,33857614-33857781,33858156-338582... 29 4.2
04_04_0877 + 29018168-29018279,29019013-29019230,29019333-29019713 29 4.2
11_06_0284 + 21909758-21913645 29 5.6
08_01_0166 - 1365203-1365571,1365602-1365695,1365794-1367220 29 5.6
04_04_1098 + 30876785-30876835,30876846-30877171,30877396-308774... 29 5.6
11_01_0678 - 5534879-5534883,5535430-5535529,5535638-5535799,553... 28 7.4
06_01_0395 - 2844566-2844811 28 7.4
01_01_0420 + 3175544-3176696,3177035-3178581,3179623-3179688,317... 28 7.4
07_03_1762 - 29299328-29299437,29299782-29299871,29300487-293012... 28 9.7
03_06_0146 - 31976538-31978643,31978653-31978751 28 9.7
>03_06_0724 -
35757228-35757323,35757837-35757893,35757983-35758075,
35758271-35758336,35758444-35758653,35758750-35759022,
35759112-35759251,35759330-35759471
Length = 358
Score = 72.1 bits (169), Expect = 5e-13
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 6/198 (3%)
Frame = +2
Query: 104 PNKKXKEIDTNSESEK--EQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDCDFHGIK 277
P K+ K + +S+ E+ D DSD DSD +QADF +P+ DFHG+K
Sbjct: 58 PPKRAKRAEPSSDEERYSSDDESYSSDSD-DSDDASEELDTVQADFAFYDPKPGDFHGVK 116
Query: 278 QLLRQLFLKSNVDLGGLAQIIISQNYIGSVVK----QCLXXXXXXXXXXXXXXXXVFGVT 445
LL+ DL G +I+ Q +G+VVK + +FG+
Sbjct: 117 LLLKTYLDSKPWDLTGFVDLILEQTTVGTVVKIADDEEDGEGNGADGSSTGGNDDLFGLI 176
Query: 446 TVVNITKRKNEPSVAQIRELLTKLSQDHADPRTKELIKYILADDSQHTGLVINERILNIP 625
+V+N+ + + +++ L + D TK+ +K +L D + GL++ R +N P
Sbjct: 177 SVLNLGRYSEHRCMKDLKDYLLAVC---GDKDTKKKLKQMLGDKAPDVGLLVCRRFVNFP 233
Query: 626 AAISVPLFASLQTELEKA 679
+ ++ SL E+ A
Sbjct: 234 YELVPKMYESLFDEVSWA 251
>06_01_0082 + 656362-657798
Length = 478
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +2
Query: 95 AKMPNKKXKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDCDFH 268
A+M + K+ TN+ S ++D + D D D D E++ D E + ED DF+
Sbjct: 214 AEMQLQLSKKRATNNSSRLDEDDDDDNDDDDDDDEGE--EQQQNNDSEMMDVEDSDFY 269
>01_01_0272 -
2249662-2249721,2250110-2250335,2250419-2250615,
2250707-2250955,2251047-2251176,2251473-2251564,
2251735-2251855,2251940-2252028,2252149-2252271,
2252379-2252506,2253039-2253147,2253701-2254000
Length = 607
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 110 KKXKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQA 229
+K KE S S K+ + E SD DSDG+ G+K+ +A
Sbjct: 533 EKAKEFVYGSGSRKKSNGKHENSSDDDSDGSCDGKKKKKA 572
>08_01_0618 -
5394841-5395036,5395179-5395244,5395727-5395769,
5396119-5396238,5396653-5396731,5396910-5397177,
5397262-5397305,5397431-5397502,5397756-5397825,
5397929-5397999
Length = 342
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 119 KEIDTNSESEKEQDSGSEKDSDFDSD 196
KE + + E+EQD+G E DSDF D
Sbjct: 46 KEDEEDDNYEEEQDAGDEFDSDFGED 71
>07_01_1104 -
10160493-10160599,10160632-10160637,10160930-10160975,
10161053-10161190,10161275-10161679,10163193-10163330,
10163401-10163482,10163596-10163943,10164294-10164655,
10165154-10165209,10166428-10166558,10166564-10166628,
10169191-10169631
Length = 774
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 122 EIDTNSESEKEQDSGSEKDSDFDSDG-NYVGEKELQADFE 238
+ D +S+ E E++ E SDFD+D +GEK+ + D E
Sbjct: 484 DYDVDSDEEWEEEEPGENLSDFDNDDEEAMGEKDSKHDAE 523
>02_01_0625 + 4690607-4690696,4692673-4692734,4692867-4693230
Length = 171
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 128 DTNSESEKEQDSGSEKDSDFDSDG-NYVGEKELQADFEGRNPED 256
+ N E + D G E D D D DG + GE E + D E E+
Sbjct: 111 EANGEGGSDDDDGGEDDDDEDEDGDDDEGEGEGEDDDEDEEEEE 154
>08_01_0626 - 5445676-5446687,5447099-5447430
Length = 447
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 128 DTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADF-EGRNPED 256
D N++ + E++ E+D D D D N V E+E D EG + E+
Sbjct: 239 DENNDDDDEEEE-MEEDEDLDEDKNDVVEEEEDEDMDEGEDDEN 281
>08_01_0175 - 1497700-1498459,1498546-1499939
Length = 717
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/95 (22%), Positives = 39/95 (41%)
Frame = +2
Query: 53 LYNISLITSSFVYFAKMPNKKXKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQAD 232
L+ + L V + +KK +E + E+E+ + G D D D DG + E E+
Sbjct: 294 LFVVLLFAMIVVLVRRRRSKKRREAE---EAEEARHVGLAGDDDDDDDGEPIVEIEM--- 347
Query: 233 FEGRNPEDCDFHGIKQLLRQLFLKSNVDLGGLAQI 337
G P +H + + + + + GG +
Sbjct: 348 --GMGPRQIPYHELVEATKSFAAEEKLGQGGFGAV 380
>05_02_0135 - 6965294-6965875
Length = 193
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +2
Query: 119 KEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDCD 262
K++D + + + DS + DSD DSD ++ + + D + D D
Sbjct: 93 KKLDNDDDDGSDWDSVDDSDSDHDSDSDHDHDSDSDHDSDFDRGSDSD 140
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 128 DTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPED 256
D +S+S+ + D DSD DSD N+ + + D + N +D
Sbjct: 122 DHDSDSDHDSDFDRGSDSDHDSDSNHDIDGDDNDDDDDDNNDD 164
>03_05_0261 -
22470565-22470714,22472101-22474270,22474368-22474540,
22474763-22474924,22476420-22476560
Length = 931
Score = 29.5 bits (63), Expect = 3.2
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +2
Query: 107 NKKXKEIDTNSESEKEQ-DSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDCDFHGIKQL 283
N EID NSE E+ Q D SE + + +G +DF+ N + + + +
Sbjct: 264 NPDVTEIDANSEDEQHQGDCNSEDKRNLKFNKETLGTGIFPSDFDNTNVQQSN-DLVNIM 322
Query: 284 LRQLFLKSNVDLGGLAQIIISQNYIGSVVK 373
L +L +L LA +I++ + + +V++
Sbjct: 323 LERLKALHEDELASLA-VIVATSGLNAVLQ 351
>03_04_0130 + 17543991-17545758,17545889-17545971,17546396-17546467
Length = 640
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 98 KMPNKKXKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEG 241
K NKK K TN + +K + +D+D D D + +L+A G
Sbjct: 120 KKKNKKKKSKKTNLKQKKAAEPKPPRDTDDDEDDEEEADDDLEALLAG 167
>03_02_0619 +
9904405-9904586,9905315-9906764,9907320-9907509,
9909578-9910164
Length = 802
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -2
Query: 372 FTTLPM*FCDIIIWASPPRST-FDFRNSCLSSCLIPWKS 259
F L + I W P R FD N+ LS L PWKS
Sbjct: 685 FDRLERKYNKISAWPRPERRLLFDLANTVLSEILAPWKS 723
>02_05_0958 +
33073302-33073442,33073839-33073913,33074382-33074497,
33076863-33076977,33077100-33077228,33078907-33078954,
33079343-33079469,33079634-33079789,33080031-33080287,
33080431-33080580,33080660-33080714,33080793-33081088,
33081252-33081335,33081869-33081941,33082164-33082291,
33082905-33083090,33083179-33083316,33083394-33083519,
33083705-33083965
Length = 886
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +2
Query: 452 VNITKRKNEPSVAQIRELLTKLSQDHADPRTKELIKYILADDSQHTGLVINERILNIPA 628
+NI + + SV+ I + L LS+ K+L++ ADD+ G NE PA
Sbjct: 689 ININDQSKQASVSLILDSLKDLSEAELSTIRKQLLEEFSADDACPLGSHSNESTSQSPA 747
>11_06_0289 - 21969248-21973516
Length = 1422
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Frame = +2
Query: 110 KKXKEIDTNSESEKEQDSGSEK-----DSDFDSDGNYVGEKELQADFEGRNPEDCDFH-- 268
++ E+ +E KEQ +G E+ D+D D D N + E + + + + E+ H
Sbjct: 488 EEQNEVRKETEGRKEQVAGEEEEKEDHDADNDEDSNDDDDDEEEEEEDDDDDEEEPIHLH 547
Query: 269 --GIKQLLRQLFLKS 307
+Q+LR++F K+
Sbjct: 548 EDQYEQILREVFTKN 562
>04_04_1475 +
33856351-33856582,33857614-33857781,33858156-33858261,
33858391-33858442,33858525-33858642,33858736-33858766,
33858962-33858985,33859075-33859199,33860087-33860168,
33860319-33860441,33860539-33860592,33860669-33860738,
33861276-33861309,33861824-33862170
Length = 521
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 110 KKXKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEK 217
+ K T SE E+D E DSD D +G G K
Sbjct: 426 RSNKRKKTKDVSESEEDDDEEDDSDDDENGEIKGGK 461
>04_04_0877 + 29018168-29018279,29019013-29019230,29019333-29019713
Length = 236
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 104 PNKKXKEIDTNSESEKEQDSGSEKDSDFDSDGN 202
PN ++ +S KE+D G D D+DS+GN
Sbjct: 80 PNTNETKVLRLLKSLKERDGGVYLDEDYDSEGN 112
>11_06_0284 + 21909758-21913645
Length = 1295
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Frame = +2
Query: 140 ESEKEQDSGS-EKDSDFDSDGNYVGEKELQADFEGRNPEDCD----FHGIK--QLLRQLF 298
E EKE D + D D+D D E+E + D + + +D D H + Q+L+++F
Sbjct: 507 EEEKEDDDDDYDDDDDYDDDDYDDNEEEKKYDDDDDDDDDDDDPIHLHTAQYMQILQEVF 566
Query: 299 LKS 307
LK+
Sbjct: 567 LKT 569
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 113 KXKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPE 253
K KE+ + EK++ G E+ + + EKE + EG+N E
Sbjct: 452 KEKELKGRKDKEKKEKGGREERKEEEHHEKQEKEKEEERKEEGQNEE 498
>08_01_0166 - 1365203-1365571,1365602-1365695,1365794-1367220
Length = 629
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/95 (21%), Positives = 39/95 (41%)
Frame = +2
Query: 53 LYNISLITSSFVYFAKMPNKKXKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQAD 232
L+ + L V + +KK +E++ E+E+ + G +D D D DG + E E+
Sbjct: 305 LFVVLLFAMVVVLVRRRRSKKRREVE---EAEEARHVGLARDDDDDDDGEPIVEIEM--- 358
Query: 233 FEGRNPEDCDFHGIKQLLRQLFLKSNVDLGGLAQI 337
G P + + + + + GG +
Sbjct: 359 --GMGPRQIPYQDLIEATNSFAAEEKLGQGGFGAV 391
>04_04_1098 +
30876785-30876835,30876846-30877171,30877396-30877418,
30877687-30879392
Length = 701
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Frame = +2
Query: 110 KKXKEIDTNSESEKE-----QDSGSEKDSDFDSDGNYVGEKELQADFEGRNPED 256
KK D+ S+SE + ++ S DS+ DSDG+Y G+K + G+N D
Sbjct: 306 KKSSRHDSESDSESDHKNARREKSSRHDSESDSDGDY-GKKTTK---HGKNDRD 355
>11_01_0678 -
5534879-5534883,5535430-5535529,5535638-5535799,
5536000-5536966,5537444-5537561,5538682-5538871,
5538952-5539107,5539296-5540315
Length = 905
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 110 KKXKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDCD 262
+K ++ + + E E + D G E +SD DSDG+ E + + + ED D
Sbjct: 93 EKDEKGEDSDEDESDDDRG-EDESDEDSDGDESDEHSDDGESDDDSDEDED 142
>06_01_0395 - 2844566-2844811
Length = 81
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = +2
Query: 143 SEKEQDSGSEKDSDFDSDGNYVG---EKELQADFEGRNPEDCDFHGIK 277
SE +D GSE S + D N G ++ L + EG N E G K
Sbjct: 24 SEGRRDGGSEDGSPVEIDANQAGIEVDRRLGKELEGDNSESVWHEGSK 71
>01_01_0420 + 3175544-3176696,3177035-3178581,3179623-3179688,
3179892-3179999
Length = 957
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +3
Query: 657 YRLNLRKLIGKICYTTLNTLFGSVKLTLLESHXKCFLQIK 776
+ +NLR+ +G + T F + +++ E CF +IK
Sbjct: 901 FDINLRRQLGALSSKTFEVFFKLINISISEDETVCFNRIK 940
>07_03_1762 -
29299328-29299437,29299782-29299871,29300487-29301291,
29301956-29303278
Length = 775
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/52 (28%), Positives = 30/52 (57%)
Frame = +2
Query: 107 NKKXKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDCD 262
+++ ++ D + + E+E+ E+D+DFD D + E+E+ D E +D D
Sbjct: 110 SRRRRQKDDDDDYEEEE----EEDADFDPDVDEDDEEEVDEDEEEFEQDDDD 157
>03_06_0146 - 31976538-31978643,31978653-31978751
Length = 734
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 128 DTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDCD 262
D ES+ E+D D + DSD Y + ++D+E + D +
Sbjct: 183 DDEEESDPEEDDTGSSDLETDSD-EYTESTDEESDYEEEDTTDLE 226
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,845,945
Number of Sequences: 37544
Number of extensions: 274837
Number of successful extensions: 1169
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1138
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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