Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_C13
(790 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58758-10|AAB93435.1| 349|Caenorhabditis elegans Hypothetical p... 64 8e-11
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 32 0.54
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 32 0.54
U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical p... 31 0.94
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 31 0.94
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 31 0.94
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 31 0.94
Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical pr... 30 1.6
AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical ... 30 1.6
AC006644-3|AAF39838.2| 491|Caenorhabditis elegans Hypothetical ... 30 2.2
AF099920-3|AAK29845.1| 216|Caenorhabditis elegans Hypothetical ... 29 2.9
Z81118-10|CAB61029.1| 657|Caenorhabditis elegans Hypothetical p... 29 3.8
Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical p... 29 3.8
Z77668-2|CAB61021.1| 657|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z46937-4|CAA87059.2| 221|Caenorhabditis elegans Hypothetical pr... 29 3.8
AJ000538-1|CAA04171.1| 657|Caenorhabditis elegans GluClalpha2A ... 29 3.8
Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical pr... 29 5.0
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p... 29 5.0
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 29 5.0
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ... 29 5.0
AC006644-4|AAF39835.1| 1030|Caenorhabditis elegans Hypothetical ... 29 5.0
AF022981-4|AAG24205.1| 602|Caenorhabditis elegans Hypothetical ... 28 6.6
AF000195-3|AAC24268.1| 689|Caenorhabditis elegans Hmg protein 3... 28 6.6
Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical pr... 28 8.8
U20861-11|AAA62291.2| 1714|Caenorhabditis elegans Hypothetical p... 28 8.8
U10401-6|AAA19061.1| 697|Caenorhabditis elegans Hmg protein 4 p... 28 8.8
AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical ... 28 8.8
AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical ... 28 8.8
AF039040-2|AAO91670.1| 615|Caenorhabditis elegans Hypothetical ... 28 8.8
AF039040-1|AAB94184.1| 553|Caenorhabditis elegans Hypothetical ... 28 8.8
>U58758-10|AAB93435.1| 349|Caenorhabditis elegans Hypothetical
protein ZK1127.4 protein.
Length = 349
Score = 64.5 bits (150), Expect = 8e-11
Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 4/211 (1%)
Frame = +2
Query: 110 KKXKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQA-DFEGRNPEDCDFHGIKQLL 286
+K +E + + E+++D E D D D + E+ + DFE P + D GI +L
Sbjct: 30 RKEEEPEPVEDVEEDEDVSDEDDEDIDDEEEDEDEQNIMDFDFEAYPPSEDDRDGIVNML 89
Query: 287 RQLFLKSNVDLGGLAQIIISQNYIGSVVKQCLXXXXXXXXXXXXXXXXVFGVTTVVNITK 466
Q FL++++DL +++ II++ G V+ Q +G+ T V +
Sbjct: 90 TQTFLRTDIDLKAMSEGIIAKAPHGVVLTQA------YDDEETEEDYMAYGLCTTVPLND 143
Query: 467 RKNEPSVAQIRELLTKL---SQDHADPRTKELIKYILADDSQHTGLVINERILNIPAAIS 637
K++ + I++L T + ++ A + I+ I + L +NER+LN P +
Sbjct: 144 NKDD-APKFIKDLFTYVLNRAKKGAPTEIYKKIEEIQVSGDGKSALFVNERLLNFPTIVV 202
Query: 638 VPLFASLQTELEKAHRKNMLYNFKYLIWISK 730
+F S++ +L K +K +I+I K
Sbjct: 203 PQIFGSIREDLSGFETK-----YKTIIYIQK 228
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 31.9 bits (69), Expect = 0.54
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 98 KMPNKKXKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFE 238
K+P +D E KE+D ++D D D D V +KE +A E
Sbjct: 1072 KIPKMLKPVVDDRREDRKERDRDRDRDRDRDEDREKVRDKEDKAQRE 1118
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 31.9 bits (69), Expect = 0.54
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 98 KMPNKKXKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFE 238
K+P +D E KE+D ++D D D D V +KE +A E
Sbjct: 1072 KIPKMLKPVVDDRREDRKERDRDRDRDRDRDEDREKVRDKEDKAQRE 1118
>U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical
protein C52B9.8 protein.
Length = 1336
Score = 31.1 bits (67), Expect = 0.94
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 119 KEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQAD 232
KE + + E EKE+D G EK+ D D + +K+ + D
Sbjct: 1235 KEKEKDKEKEKEEDKGKEKEKHKDKDKDKEHKKKSRED 1272
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 31.1 bits (67), Expect = 0.94
Identities = 17/75 (22%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +2
Query: 98 KMPNKKXKEIDTNS-ESEKEQDSGSEKDSDFDSDGNYVGEKE-LQADFEGRNPEDCDFHG 271
K+ +K K+ +T S E +KEQ+ +++ S + D EK+ L+++ + + E+
Sbjct: 9920 KLEEQKKKDAETASIEKQKEQEKLAQEQSKLEVDAKKSAEKQKLESETKSKKTEEAPKES 9979
Query: 272 IKQLLRQLFLKSNVD 316
+ + ++ LK +
Sbjct: 9980 VDEKPKKKVLKKKTE 9994
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 31.1 bits (67), Expect = 0.94
Identities = 17/75 (22%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +2
Query: 98 KMPNKKXKEIDTNS-ESEKEQDSGSEKDSDFDSDGNYVGEKE-LQADFEGRNPEDCDFHG 271
K+ +K K+ +T S E +KEQ+ +++ S + D EK+ L+++ + + E+
Sbjct: 9940 KLEEQKKKDAETASIEKQKEQEKLAQEQSKLEVDAKKSAEKQKLESETKSKKTEEAPKES 9999
Query: 272 IKQLLRQLFLKSNVD 316
+ + ++ LK +
Sbjct: 10000 VDEKPKKKVLKKKTE 10014
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 31.1 bits (67), Expect = 0.94
Identities = 17/75 (22%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +2
Query: 98 KMPNKKXKEIDTNS-ESEKEQDSGSEKDSDFDSDGNYVGEKE-LQADFEGRNPEDCDFHG 271
K+ +K K+ +T S E +KEQ+ +++ S + D EK+ L+++ + + E+
Sbjct: 9940 KLEEQKKKDAETASIEKQKEQEKLAQEQSKLEVDAKKSAEKQKLESETKSKKTEEAPKES 9999
Query: 272 IKQLLRQLFLKSNVD 316
+ + ++ LK +
Sbjct: 10000 VDEKPKKKVLKKKTE 10014
>Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical
protein K07C5.6 protein.
Length = 647
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 95 AKMPNKKXKEIDTNSESEKEQDSGSEKDSD 184
AK+ +K + D++ ES+ SGSE DSD
Sbjct: 546 AKLGKRKRRHRDSDDESDPSSGSGSESDSD 575
>Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical
protein F29C12.3 protein.
Length = 1631
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 599 INERILNIPAAISVPLFASLQTELEKAHRKNMLYNFKYLIWISKTYTTGESSXVLFANQE 778
INER L + V +F +L+ ++ L FK +IW+ K Y ++ ++
Sbjct: 125 INERNLVVILTTHVDIFIVRAIDLQMENQTERLEAFKLIIWMLKIYEKSNLKKLIDSSAA 184
Query: 779 EKS 787
+K+
Sbjct: 185 QKN 187
>AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical
protein F29C12.3 protein.
Length = 1631
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 599 INERILNIPAAISVPLFASLQTELEKAHRKNMLYNFKYLIWISKTYTTGESSXVLFANQE 778
INER L + V +F +L+ ++ L FK +IW+ K Y ++ ++
Sbjct: 125 INERNLVVILTTHVDIFIVRAIDLQMENQTERLEAFKLIIWMLKIYEKSNLKKLIDSSAA 184
Query: 779 EKS 787
+K+
Sbjct: 185 QKN 187
>AC006644-3|AAF39838.2| 491|Caenorhabditis elegans Hypothetical
protein F55A3.7 protein.
Length = 491
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +2
Query: 104 PNKKXKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADF 235
P ++ + SES++++ G E +SD D +G+ ++ +Q F
Sbjct: 446 PEEEDASAGSGSESDEDESEGEETESDDDDEGSLDSDEFVQPIF 489
>AF099920-3|AAK29845.1| 216|Caenorhabditis elegans Hypothetical
protein H06H21.3 protein.
Length = 216
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 128 DTNSESEKEQDSGSEKDSDFDS-DGNYVGEKELQA 229
+ S+ E+E D SE++SD DS D + + E++L A
Sbjct: 158 EAGSDKEEESDDDSEEESDEDSDDSDNIREEDLAA 192
>Z81118-10|CAB61029.1| 657|Caenorhabditis elegans Hypothetical
protein R11G10.1a protein.
Length = 657
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 86 VYFAKMPNKKXKEIDTNSESEKEQDSGSEKDSDFDS-DGNYVGEKELQADFEGRNPE 253
V ++ P +K KE+ +E E E++ G E D ++ +G Y E A+ E +PE
Sbjct: 111 VITSETPVEKHKEVHFKNEPE-EEEIGKEDDGGGEAEEGEYEEENGSDAEEEEESPE 166
>Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical
protein R10D12.10 protein.
Length = 497
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 119 KEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFE 238
K + N E E+E++ EK+ + D + EKE + D E
Sbjct: 357 KVVKKNKEKEREKEKDKEKEKEKDKEKEKEKEKEKEKDKE 396
>Z77668-2|CAB61021.1| 657|Caenorhabditis elegans Hypothetical
protein R11G10.1a protein.
Length = 657
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 86 VYFAKMPNKKXKEIDTNSESEKEQDSGSEKDSDFDS-DGNYVGEKELQADFEGRNPE 253
V ++ P +K KE+ +E E E++ G E D ++ +G Y E A+ E +PE
Sbjct: 111 VITSETPVEKHKEVHFKNEPE-EEEIGKEDDGGGEAEEGEYEEENGSDAEEEEESPE 166
>Z46937-4|CAA87059.2| 221|Caenorhabditis elegans Hypothetical
protein F43C1.5 protein.
Length = 221
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 98 KMPNKKXKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQAD 232
K+P K K + K+ + D D DG Y+GE E++++
Sbjct: 152 KIPGKNSKNSKISVNKAKKLEPRRRSDEDRVPDGPYIGEGEVKSE 196
>AJ000538-1|CAA04171.1| 657|Caenorhabditis elegans GluClalpha2A
protein protein.
Length = 657
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 86 VYFAKMPNKKXKEIDTNSESEKEQDSGSEKDSDFDS-DGNYVGEKELQADFEGRNPE 253
V ++ P +K KE+ +E E E++ G E D ++ +G Y E A+ E +PE
Sbjct: 111 VITSETPVEKHKEVHFKNEPE-EEEIGKEDDGGGEAEEGEYEEENGSDAEEEEESPE 166
>Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical
protein K08E4.1 protein.
Length = 1208
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +2
Query: 107 NKKXKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDCDF 265
+KK ++ SESEK S + D D D D N +K + + + P DF
Sbjct: 31 SKKDRKRKLASESEKS-GSDDDDDDDDDEDENVTSKKSKKQKRKNKAPSGRDF 82
>Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical
protein K08E4.1 protein.
Length = 1208
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +2
Query: 107 NKKXKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDCDF 265
+KK ++ SESEK S + D D D D N +K + + + P DF
Sbjct: 31 SKKDRKRKLASESEKS-GSDDDDDDDDDEDENVTSKKSKKQKRKNKAPSGRDF 82
>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
protein 2, isoform b protein.
Length = 2027
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +2
Query: 107 NKKXKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGE-KELQADFEGRNPEDCDFHGIKQL 283
NKK K+ +E E+D E+D D + + YV E ++ +F R C H + +
Sbjct: 453 NKKLKQASKQQSTETEEDF--EEDED-EMEEEYVDEGGTVEDEFAERKKRGC-CHSVGKF 508
Query: 284 LRQLFLKSNV 313
++QL ++ +
Sbjct: 509 IKQLRIQIRI 518
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +2
Query: 98 KMPNKKXKEIDTNSESEKEQD---SGSEKDSDFDSDGN 202
K +KK K+ D N E EKE+D +KD D D D N
Sbjct: 179 KKKDKKKKK-DDNDEEEKEKDKKKKDKKKDDDDDEDEN 215
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +2
Query: 98 KMPNKKXKEIDTNSE-SEKEQD---SGSEKDSDFDSDGNYVGEKELQADFEGRNPEDCD 262
K +KK K+ D + E EKE+D +KD D D D +K+ + D + ED D
Sbjct: 294 KKKDKKKKKDDKDDEDEEKEKDKKKKDKKKDDDDDDDEKEKKDKKKKDDKDDDEDEDKD 352
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 98 KMPNKKXKEIDTNSESEKEQDSGSEKDSDFDSD-GNYVGEKELQADFEGRNPED 256
K KK K+ + + E +K++D +KD D D D N +K+ + D + E+
Sbjct: 258 KDKKKKDKKKNDDDEEDKKKDKKKKKDDDDDEDEDNKKKDKKKKKDDKDDEDEE 311
>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
activated calciumchannel alpha-1 subunit protein.
Length = 2027
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +2
Query: 107 NKKXKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGE-KELQADFEGRNPEDCDFHGIKQL 283
NKK K+ +E E+D E+D D + + YV E ++ +F R C H + +
Sbjct: 453 NKKLKQASKQQSTETEEDF--EEDED-EMEEEYVDEGGTVEDEFAERKKRGC-CHSVGKF 508
Query: 284 LRQLFLKSNV 313
++QL ++ +
Sbjct: 509 IKQLRIQIRI 518
>AC006644-4|AAF39835.1| 1030|Caenorhabditis elegans Hypothetical
protein F55A3.3 protein.
Length = 1030
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/50 (24%), Positives = 25/50 (50%)
Frame = +2
Query: 104 PNKKXKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPE 253
P ++ + SES++++ G E +SD D +G+ ++ D+ E
Sbjct: 946 PEEEDASAGSGSESDEDESEGEETESDDDDEGSLDSDESEGKDWSDLEEE 995
>AF022981-4|AAG24205.1| 602|Caenorhabditis elegans Hypothetical
protein W03F9.10 protein.
Length = 602
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 113 KXKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEK-ELQAD 232
K EI+T E +KE+++G D D + +Y+GE E++ D
Sbjct: 46 KQAEIETREEPKKEEENGD----DLDVEIDYIGETIEIEPD 82
>AF000195-3|AAC24268.1| 689|Caenorhabditis elegans Hmg protein 3
protein.
Length = 689
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 98 KMPNKKXKEIDTNSESEKEQDSGSEKDS 181
K N K + SE + E DSGSEKD+
Sbjct: 483 KQKNDKDSSEGSGSEPDDEYDSGSEKDA 510
>Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = +2
Query: 104 PNKKXKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDCD 262
P K+ ++D + + E + D + D D DGN + + D + + D D
Sbjct: 249 PVKEEPDLDDDDDDEDDDDDDGDDDDDEKDDGNDAEKDDGDDDDDDDDGNDDD 301
>Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = +2
Query: 104 PNKKXKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDCD 262
P K+ ++D + + E + D + D D DGN + + D + + D D
Sbjct: 249 PVKEEPDLDDDDDDEDDDDDDGDDDDDEKDDGNDAEKDDGDDDDDDDDGNDDD 301
>U20861-11|AAA62291.2| 1714|Caenorhabditis elegans Hypothetical
protein C28H8.3 protein.
Length = 1714
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 98 KMPNKKXKEIDTNSESEKEQDSGSEKDSD 184
K+ +K + + + +K++D+G EKD D
Sbjct: 1194 KLAKRKRDDAEKKKKGDKDEDAGPEKDDD 1222
>U10401-6|AAA19061.1| 697|Caenorhabditis elegans Hmg protein 4
protein.
Length = 697
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +2
Query: 98 KMPNKKXKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPED 256
K +K+ E T SE + E DSGSE+DS + E+++ + P++
Sbjct: 480 KKEDKESSE-GTGSEPDDEYDSGSEQDSSGTGESEPDSEQDVPSKRRKGEPKE 531
>AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical
protein C35E7.5b protein.
Length = 954
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 122 EIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDCDFHG 271
E + ESE+++D ++DS+ D D ++E + + E + E+ + G
Sbjct: 889 EDEDEEESEEDEDEEEDEDSEEDEDEEEYEDEESEYEDEEEDEEEEEEEG 938
>AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical
protein C35E7.5a protein.
Length = 1262
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 122 EIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDCDFHG 271
E + ESE+++D ++DS+ D D ++E + + E + E+ + G
Sbjct: 889 EDEDEEESEEDEDEEEDEDSEEDEDEEEYEDEESEYEDEEEDEEEEEEEG 938
>AF039040-2|AAO91670.1| 615|Caenorhabditis elegans Hypothetical
protein T22B11.4b protein.
Length = 615
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 119 KEIDTNSESEKEQDSGSEKDSDFDS 193
+E T SE ++E+DS S++D D +S
Sbjct: 436 EETTTTSEDDEEKDSNSDEDEDEES 460
>AF039040-1|AAB94184.1| 553|Caenorhabditis elegans Hypothetical
protein T22B11.4a protein.
Length = 553
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 119 KEIDTNSESEKEQDSGSEKDSDFDS 193
+E T SE ++E+DS S++D D +S
Sbjct: 436 EETTTTSEDDEEKDSNSDEDEDEES 460
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,787,744
Number of Sequences: 27780
Number of extensions: 272828
Number of successful extensions: 1366
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1323
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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