Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_C12
         (891 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   2.4  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   2.4  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    23   4.3  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   9.8  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   9.8  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   9.8  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +2

Query: 659 IVFVDYYRMFHGLC*QIRVLVSANYFFFVIIR 754
           I+ +++Y+ F     Q+ VL   N+ FFV+++
Sbjct: 139 IMGLEFYKQFAIEYFQMYVLFFVNFAFFVVVK 170


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +2

Query: 659 IVFVDYYRMFHGLC*QIRVLVSANYFFFVIIR 754
           I+ +++Y+ F     Q+ VL   N+ FFV+++
Sbjct: 139 IMGLEFYKQFAIEYFQMYVLFFVNFAFFVVVK 170


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 318 GCGKCTLRWRLGNRRL 271
           GC KCT + + G+R++
Sbjct: 74  GCSKCTEKQKEGSRKI 89


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 512 LALSFRRLWAVCE 550
           LA+SF R +A+C+
Sbjct: 162 LAISFERYYAICK 174


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 512 LALSFRRLWAVCE 550
           LA+SF R +A+C+
Sbjct: 162 LAISFERYYAICK 174


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +2

Query: 197 AEPSTPPLLEVQE 235
           A PS PP LEV E
Sbjct: 227 ATPSPPPQLEVNE 239


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,427
Number of Sequences: 336
Number of extensions: 4446
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24720487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)