Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_C12
(891 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr... 31 1.5
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ... 31 1.5
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein. 31 1.5
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical pr... 28 7.8
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 28 7.8
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 28 7.8
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 28 7.8
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 28 7.8
AC006696-2|ABQ13058.1| 129|Caenorhabditis elegans Hypothetical ... 28 7.8
AC006696-1|AAF39991.1| 151|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +1
Query: 172 PDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAALLKNPSSVPNA 351
P+ + PG T GT V ++ M QS S PP+ + + P+ VP
Sbjct: 361 PETRGAEPGCTAGEWL-NGTNAVPQKVSMAP-SQSSSSPPPPEPVPTPKVAQTPAPVPVP 418
Query: 352 QPASTQKPRSNSIS 393
PA+ +P SN+ S
Sbjct: 419 TPAAAPRPMSNNNS 432
>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +1
Query: 172 PDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAALLKNPSSVPNA 351
P+ + PG T GT V ++ M QS S PP+ + + P+ VP
Sbjct: 361 PETRGAEPGCTAGEWL-NGTNAVPQKVSMAP-SQSSSSPPPPEPVPTPKVAQTPAPVPVP 418
Query: 352 QPASTQKPRSNSIS 393
PA+ +P SN+ S
Sbjct: 419 TPAAAPRPMSNNNS 432
>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
Length = 1057
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +1
Query: 172 PDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAALLKNPSSVPNA 351
P+ + PG T GT V ++ M QS S PP+ + + P+ VP
Sbjct: 361 PETRGAEPGCTAGEWL-NGTNAVPQKVSMAP-SQSSSSPPPPEPVPTPKVAQTPAPVPVP 418
Query: 352 QPASTQKPRSNSIS 393
PA+ +P SN+ S
Sbjct: 419 TPAAAPRPMSNNNS 432
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = +1
Query: 160 PAQMPDVYSSTPGGTIYSTTPGGTRI-VYERSFMLSLRQSPISQTPPQCALPAALLKN-- 330
P+Q P P T + P +I V ++ S + SP Q PQ + P A
Sbjct: 197 PSQSPQGSPQLPTQTTTTNAPIKIKIQVQQQQPQQSPQNSPQQQAQPQASQPIAQTTQTI 256
Query: 331 PSSVPNAQP 357
P+S+P A P
Sbjct: 257 PASIPQAAP 265
>Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical
protein F58G6.1 protein.
Length = 461
Score = 28.3 bits (60), Expect = 7.8
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +1
Query: 262 SLRQSPISQTPPQCALPAALLK---NPSSVPNAQPASTQKPRSNSISFDESQETFSMD 426
SL S TP Q + L+ +PS +P+ PA KPR + +S S F D
Sbjct: 255 SLASSDAPATPDQNKSDNSSLRQTPSPSVLPSPVPAPMAKPRESVVSMANSTNPFDDD 312
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 28.3 bits (60), Expect = 7.8
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Frame = +1
Query: 115 THSQSIPSRRVLITDPAQ---MPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPIS 285
T S + P+ V T P +P V ++TP T +TT T ++ +P+
Sbjct: 657 TSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQT----TPTTPVV 712
Query: 286 QTPPQCALPAALLKNPSSVPNAQPAST 366
TP + P+S P QPA+T
Sbjct: 713 TTPSTITPTTRPVTQPASQPATQPATT 739
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 28.3 bits (60), Expect = 7.8
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Frame = +1
Query: 115 THSQSIPSRRVLITDPAQ---MPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPIS 285
T S + P+ V T P +P V ++TP T +TT T ++ +P+
Sbjct: 713 TSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQT----TPTTPVV 768
Query: 286 QTPPQCALPAALLKNPSSVPNAQPAST 366
TP + P+S P QPA+T
Sbjct: 769 TTPSTITPTTRPVTQPASQPATQPATT 795
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 28.3 bits (60), Expect = 7.8
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Frame = +1
Query: 115 THSQSIPSRRVLITDPAQ---MPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPIS 285
T S + P+ V T P +P V ++TP T +TT T ++ +P+
Sbjct: 536 TSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQT----TPTTPVV 591
Query: 286 QTPPQCALPAALLKNPSSVPNAQPAST 366
TP + P+S P QPA+T
Sbjct: 592 TTPSTITPTTRPVTQPASQPATQPATT 618
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 61 LTPRKFLIMSASPIARQATHSQSIPS-RRVLITDPAQMPDVYSSTPGGTIYSTTPGGTRI 237
LTP + I+S P +RQ+T + S+P+ + P+Q + S+ P I+ T +
Sbjct: 832 LTPSELPIISNLPASRQSTSAPSVPNVSNNSPSPPSQSIPIESTVP---IFGTPSSIPSM 888
Query: 238 VYERSFMLSLRQSPIS 285
RS S + P+S
Sbjct: 889 EPTRSTANSSKNHPVS 904
>AC006696-2|ABQ13058.1| 129|Caenorhabditis elegans Hypothetical
protein W08E12.8b protein.
Length = 129
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/65 (33%), Positives = 30/65 (46%)
Frame = +1
Query: 139 RRVLITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAA 318
RRVL + + P + S + +STTP + + +LS S SQ PP LP
Sbjct: 11 RRVLDEEENECPPIESRGSSTSSFSTTPSSSASPLSINQLLS---SSFSQ-PPAPQLPVP 66
Query: 319 LLKNP 333
L NP
Sbjct: 67 LAFNP 71
>AC006696-1|AAF39991.1| 151|Caenorhabditis elegans Hypothetical
protein W08E12.8a protein.
Length = 151
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/65 (33%), Positives = 30/65 (46%)
Frame = +1
Query: 139 RRVLITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAA 318
RRVL + + P + S + +STTP + + +LS S SQ PP LP
Sbjct: 33 RRVLDEEENECPPIESRGSSTSSFSTTPSSSASPLSINQLLS---SSFSQ-PPAPQLPVP 88
Query: 319 LLKNP 333
L NP
Sbjct: 89 LAFNP 93
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,728,841
Number of Sequences: 27780
Number of extensions: 418217
Number of successful extensions: 1162
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1162
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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