Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_C11
         (789 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.   419   e-119
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.   360   e-102
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   4.3  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   4.3  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   7.5  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    22   7.5  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   9.9  

>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score =  419 bits (1033), Expect = e-119
 Identities = 187/209 (89%), Positives = 201/209 (96%)
 Frame = +2

Query: 161 VFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFK 340
           VFD LK KKTSF STLLDCIQSG+ENLDSGVGIYAPDAE+Y++FA+LFDPIIEDYH GFK
Sbjct: 34  VFDQLKTKKTSFDSTLLDCIQSGIENLDSGVGIYAPDAEAYTLFADLFDPIIEDYHGGFK 93

Query: 341 KTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSG 520
           KTDKHPPK++GDVD+LGNLDPA EF+VSTRVRCGRSLEGYPFNPCLTE+QYKEME+KVS 
Sbjct: 94  KTDKHPPKDFGDVDSLGNLDPANEFIVSTRVRCGRSLEGYPFNPCLTEAQYKEMEEKVSS 153

Query: 521 TLSSLEGELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNE 700
           TLS LEGELKGTFYPLTGMSKETQQ+LIDDHFLFKEGDRFLQAANACRFWPTGRGIYHN+
Sbjct: 154 TLSGLEGELKGTFYPLTGMSKETQQKLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHND 213

Query: 701 NKTFLVWCNEEDHLRIISMQMGGDLXQVY 787
           +KTFLVWCNEEDHLRIISMQMGGDL QVY
Sbjct: 214 DKTFLVWCNEEDHLRIISMQMGGDLGQVY 242



 Score = 29.5 bits (63), Expect = 0.037
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = +3

Query: 60  MVDAATLEKLEAGFSKL 110
           MVD A L+KLE GFSKL
Sbjct: 1   MVDQAVLDKLETGFSKL 17


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score =  360 bits (886), Expect = e-102
 Identities = 161/183 (87%), Positives = 175/183 (95%)
 Frame = +2

Query: 161 VFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFK 340
           VFD LK KKTSF STLLDCIQSG+ENLDSGVGIYAPDAE+Y++FA+LFDPIIEDYH GFK
Sbjct: 18  VFDQLKTKKTSFDSTLLDCIQSGIENLDSGVGIYAPDAEAYTLFADLFDPIIEDYHGGFK 77

Query: 341 KTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSG 520
           KTDKHPPK++GDVD+LGNLDPA EF+VSTRVRCGRSLEGYPFNPCLTE+QYKEME+KVS 
Sbjct: 78  KTDKHPPKDFGDVDSLGNLDPANEFIVSTRVRCGRSLEGYPFNPCLTEAQYKEMEEKVSS 137

Query: 521 TLSSLEGELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNE 700
           TLS LEGELKGTFYPLTGMSKETQQ+LIDDHFLFKEGDRFLQAANA RFWPTGRGIYHN+
Sbjct: 138 TLSGLEGELKGTFYPLTGMSKETQQKLIDDHFLFKEGDRFLQAANAXRFWPTGRGIYHND 197

Query: 701 NKT 709
           +KT
Sbjct: 198 DKT 200


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = -1

Query: 672 GQKRQALAACRKR-SPSLNRKWSSMSCCWV 586
           G K   ++AC     P + +K    +CCWV
Sbjct: 440 GTKDIPISACSLPCEPGMIKKQQGDTCCWV 469


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = -1

Query: 672 GQKRQALAACRKR-SPSLNRKWSSMSCCWV 586
           G K   ++AC     P + +K    +CCWV
Sbjct: 530 GTKDIPISACSLPCEPGMIKKQQGDTCCWV 559


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 37 QVPEKPQQWSTPQPSR 84
          Q P+ PQ+ S P PS+
Sbjct: 29 QSPQAPQRGSPPNPSQ 44


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 665 FWPTGRGIYHNENKTFLVWCNEEDHLRIISMQM 763
           F+  GRGI + + K   V  +++ H++I    M
Sbjct: 99  FFLHGRGIVYRDLKLDNVLLDQDGHIKIADFGM 131


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +1

Query: 313 HRGLPQWLQEDRQAPAQEL 369
           H G   W QED  A  + L
Sbjct: 405 HHGSKSWTQEDMDAALEAL 423


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,579
Number of Sequences: 438
Number of extensions: 3806
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)