Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_C10
         (636 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    25   0.40 
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    25   0.40 
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   1.6  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   3.7  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   3.7  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   3.7  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   8.6  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   8.6  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   8.6  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   8.6  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 25.4 bits (53), Expect = 0.40
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 207 EWEYVKRLLPFTTIPKIIPKD 269
           +W  VKR +P  T+PKI P +
Sbjct: 198 KWMQVKRNVPKPTVPKIPPAE 218


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 25.4 bits (53), Expect = 0.40
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 207 EWEYVKRLLPFTTIPKIIPKD 269
           +W  VKR +P  T+PKI P +
Sbjct: 198 KWMQVKRNVPKPTVPKIPPAE 218


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = +3

Query: 414 EGDIWLLNDEIKQYLKQKNKRYVETRVHEVARLI 515
           +G++ +L  EI+ ++  KNK   +TR H+ A+ +
Sbjct: 394 KGEVTVL--EIEDWVLLKNKVTSDTRTHQFAKFM 425


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -3

Query: 103 DSGNNFAPKSSELFKMRPFFPTKRR 29
           D G N     +EL KMRP   + RR
Sbjct: 238 DDGKNQQRTGTELTKMRPKRQSSRR 262


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
 Frame = +1

Query: 73  LIWVQNYCRNHNWHYLQNITLV---TENHRLCVKSKS 174
           L WV     NHN  Y   +T V    +N R   +SK+
Sbjct: 440 LYWVDEILANHNDVYFVTMTQVIQWIQNPRTITESKN 476


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 11/44 (25%), Positives = 21/44 (47%)
 Frame = +3

Query: 429 LLNDEIKQYLKQKNKRYVETRVHEVARLIETKGDYVNDLREWAL 560
           L+N+++   +  KN       V +++RL+       ND+  W L
Sbjct: 197 LINEQMAVRINPKNCASFVIEVRKLSRLLGEMVGLFNDIFGWPL 240


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -3

Query: 163 LRTNGDFP*LE*CFEDSANCDSGNNFA 83
           L  N D    E C+++  NC  G  FA
Sbjct: 571 LGINSDALEPEWCWQNEENCPIGGKFA 597


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 217 TSNVCCRLLLYLR*FPK 267
           T N+C +LL  L  FPK
Sbjct: 320 TPNICYKLLSNLGIFPK 336


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 444 FHRSKAICR 418
           FHRSK +CR
Sbjct: 104 FHRSKYLCR 112


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 444 FHRSKAICR 418
           FHRSK +CR
Sbjct: 124 FHRSKYLCR 132


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,396
Number of Sequences: 336
Number of extensions: 3336
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)