Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_C08
(690 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8 prot... 272 8e-73
BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8 pr... 272 8e-73
AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8 pr... 272 8e-73
AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8 pr... 272 8e-73
AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8 pr... 225 9e-59
BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal pr... 115 1e-25
CR457284-1|CAG33565.1| 201|Homo sapiens FLJ11749 protein. 30 6.8
BC010108-1|AAH10108.1| 201|Homo sapiens chromatin modifying pro... 30 6.8
AY329087-1|AAQ91196.1| 201|Homo sapiens VPS20 protein. 30 6.8
AK021811-1|BAB13901.1| 201|Homo sapiens protein ( Homo sapiens ... 30 6.8
BC037399-1|AAH37399.1| 446|Homo sapiens KIAA0415 protein protein. 30 8.9
BC008841-1|AAH08841.2| 391|Homo sapiens KIAA0415 protein protein. 30 8.9
AB007875-1|BAA24845.1| 634|Homo sapiens KIAA0415 protein. 30 8.9
>X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 272 bits (667), Expect = 8e-73
Identities = 124/162 (76%), Positives = 140/162 (86%)
Frame = +2
Query: 173 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 352
R RGGN KYRALRLD GNFSWGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+
Sbjct: 47 RVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDS 106
Query: 353 TPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALXEQF 532
TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ L EQF
Sbjct: 107 TPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQF 166
Query: 533 HTGRLLACVASRPGQCGRADGYILXGKELEFYLRKIKSKRAK 658
G+LLAC+ASRPGQCGRADGY+L GKELEFYLRKIK+++ K
Sbjct: 167 QQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
Score = 41.9 bits (94), Expect = 0.002
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1
Query: 79 GNVRPYASXRXSALGRPAANTRLGPQRIHS 168
G +PY R LGRPAANT++GP+RIH+
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
Score = 32.3 bits (70), Expect = 1.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 33 LGLXRAHWHQXRATGGQRAPIRK 101
+G+ R +WH+ R TGG+R P K
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHK 23
>BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 272 bits (667), Expect = 8e-73
Identities = 124/162 (76%), Positives = 140/162 (86%)
Frame = +2
Query: 173 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 352
R RGGN KYRALRLD GNFSWGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+
Sbjct: 47 RVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDS 106
Query: 353 TPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALXEQF 532
TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ L EQF
Sbjct: 107 TPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQF 166
Query: 533 HTGRLLACVASRPGQCGRADGYILXGKELEFYLRKIKSKRAK 658
G+LLAC+ASRPGQCGRADGY+L GKELEFYLRKIK+++ K
Sbjct: 167 QQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
Score = 41.9 bits (94), Expect = 0.002
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1
Query: 79 GNVRPYASXRXSALGRPAANTRLGPQRIHS 168
G +PY R LGRPAANT++GP+RIH+
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
Score = 32.3 bits (70), Expect = 1.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 33 LGLXRAHWHQXRATGGQRAPIRK 101
+G+ R +WH+ R TGG+R P K
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHK 23
>AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 272 bits (667), Expect = 8e-73
Identities = 124/162 (76%), Positives = 140/162 (86%)
Frame = +2
Query: 173 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 352
R RGGN KYRALRLD GNFSWGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+
Sbjct: 47 RVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDS 106
Query: 353 TPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALXEQF 532
TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ L EQF
Sbjct: 107 TPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQF 166
Query: 533 HTGRLLACVASRPGQCGRADGYILXGKELEFYLRKIKSKRAK 658
G+LLAC+ASRPGQCGRADGY+L GKELEFYLRKIK+++ K
Sbjct: 167 QQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
Score = 41.9 bits (94), Expect = 0.002
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1
Query: 79 GNVRPYASXRXSALGRPAANTRLGPQRIHS 168
G +PY R LGRPAANT++GP+RIH+
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
Score = 32.3 bits (70), Expect = 1.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 33 LGLXRAHWHQXRATGGQRAPIRK 101
+G+ R +WH+ R TGG+R P K
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHK 23
>AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 272 bits (667), Expect = 8e-73
Identities = 124/162 (76%), Positives = 140/162 (86%)
Frame = +2
Query: 173 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 352
R RGGN KYRALRLD GNFSWGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+
Sbjct: 47 RVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDS 106
Query: 353 TPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALXEQF 532
TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ L EQF
Sbjct: 107 TPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQF 166
Query: 533 HTGRLLACVASRPGQCGRADGYILXGKELEFYLRKIKSKRAK 658
G+LLAC+ASRPGQCGRADGY+L GKELEFYLRKIK+++ K
Sbjct: 167 QQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
Score = 41.9 bits (94), Expect = 0.002
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1
Query: 79 GNVRPYASXRXSALGRPAANTRLGPQRIHS 168
G +PY R LGRPAANT++GP+RIH+
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
Score = 32.3 bits (70), Expect = 1.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 33 LGLXRAHWHQXRATGGQRAPIRK 101
+G+ R +WH+ R TGG+R P K
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHK 23
>AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8
protein.
Length = 188
Score = 225 bits (551), Expect = 9e-59
Identities = 109/157 (69%), Positives = 126/157 (80%)
Frame = +2
Query: 188 NTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQ 367
NTK R+ T G C TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQ
Sbjct: 35 NTKIGPRRIHTVRVRGG--C-TRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQ 91
Query: 368 WYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALXEQFHTGRL 547
WYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ L EQF G+L
Sbjct: 92 WYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKL 151
Query: 548 LACVASRPGQCGRADGYILXGKELEFYLRKIKSKRAK 658
LAC+ASRPGQCGRADGY+L GKELEFYLRKIK+++ K
Sbjct: 152 LACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 188
Score = 41.9 bits (94), Expect = 0.002
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1
Query: 79 GNVRPYASXRXSALGRPAANTRLGPQRIHS 168
G +PY R LGRPAANT++GP+RIH+
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
Score = 32.3 bits (70), Expect = 1.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 33 LGLXRAHWHQXRATGGQRAPIRK 101
+G+ R +WH+ R TGG+R P K
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHK 23
>BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal
protein S8 protein.
Length = 80
Score = 115 bits (277), Expect = 1e-25
Identities = 52/80 (65%), Positives = 64/80 (80%)
Frame = +2
Query: 419 LTEAEEAIINKKRSQKTARKYLARQRLAKVEGALXEQFHTGRLLACVASRPGQCGRADGY 598
LT EE I+NKKRS+K +KY R++ AK+ L EQF G+LLAC+ASRPGQCGRADGY
Sbjct: 1 LTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGY 60
Query: 599 ILXGKELEFYLRKIKSKRAK 658
+L GKELEFYLRKIK+++ K
Sbjct: 61 VLEGKELEFYLRKIKARKGK 80
>CR457284-1|CAG33565.1| 201|Homo sapiens FLJ11749 protein.
Length = 201
Score = 30.3 bits (65), Expect = 6.8
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = +2
Query: 398 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALXEQ 529
GRKK +++TE ++AI+ K+ + R+Y R Q+L + E AL Q
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLER-ERALARQ 50
>BC010108-1|AAH10108.1| 201|Homo sapiens chromatin modifying
protein 6 protein.
Length = 201
Score = 30.3 bits (65), Expect = 6.8
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = +2
Query: 398 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALXEQ 529
GRKK +++TE ++AI+ K+ + R+Y R Q+L + E AL Q
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLER-ERALARQ 50
>AY329087-1|AAQ91196.1| 201|Homo sapiens VPS20 protein.
Length = 201
Score = 30.3 bits (65), Expect = 6.8
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = +2
Query: 398 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALXEQ 529
GRKK +++TE ++AI+ K+ + R+Y R Q+L + E AL Q
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLER-ERALARQ 50
>AK021811-1|BAB13901.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ11749 fis, clone HEMBA1005558, weakly similar to
NUCLEAR PROTEIN SNF7. ).
Length = 201
Score = 30.3 bits (65), Expect = 6.8
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = +2
Query: 398 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALXEQ 529
GRKK +++TE ++AI+ K+ + R+Y R Q+L + E AL Q
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLER-ERALARQ 50
>BC037399-1|AAH37399.1| 446|Homo sapiens KIAA0415 protein protein.
Length = 446
Score = 29.9 bits (64), Expect = 8.9
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1
Query: 567 RLATQASKRPVWNCSXRAPSTL 502
R A AS+RP+W+ S RAPS L
Sbjct: 329 RSAPAASERPLWDTSLRAPSCL 350
>BC008841-1|AAH08841.2| 391|Homo sapiens KIAA0415 protein protein.
Length = 391
Score = 29.9 bits (64), Expect = 8.9
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1
Query: 567 RLATQASKRPVWNCSXRAPSTL 502
R A AS+RP+W+ S RAPS L
Sbjct: 69 RSAPAASERPLWDTSLRAPSCL 90
>AB007875-1|BAA24845.1| 634|Homo sapiens KIAA0415 protein.
Length = 634
Score = 29.9 bits (64), Expect = 8.9
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1
Query: 567 RLATQASKRPVWNCSXRAPSTL 502
R A AS+RP+W+ S RAPS L
Sbjct: 506 RSAPAASERPLWDTSLRAPSCL 527
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,309,879
Number of Sequences: 237096
Number of extensions: 1951203
Number of successful extensions: 4516
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4516
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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