Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_C06
(822 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66494-6|CAE48497.1| 423|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z66494-5|CAA91259.1| 473|Caenorhabditis elegans Hypothetical pr... 31 1.3
AL132949-23|CAB70113.2| 152|Caenorhabditis elegans Hypothetical... 31 1.3
AL132949-6|CAB70102.1| 152|Caenorhabditis elegans Hypothetical ... 31 1.3
AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical ... 31 1.3
AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical ... 31 1.3
AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical ... 31 1.3
Z81085-3|CAB03115.1| 769|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z81579-8|CAN86617.1| 930|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z81579-7|CAB61019.1| 927|Caenorhabditis elegans Hypothetical pr... 28 7.0
U13642-4|AAG00043.2| 687|Caenorhabditis elegans Hypothetical pr... 28 7.0
AF016852-1|AAB94551.1| 927|Caenorhabditis elegans HMP-1 protein. 28 7.0
U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical pr... 28 9.3
U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical pr... 28 9.3
U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical pr... 28 9.3
>Z66494-6|CAE48497.1| 423|Caenorhabditis elegans Hypothetical
protein C34C6.5b protein.
Length = 423
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/71 (21%), Positives = 30/71 (42%)
Frame = +3
Query: 519 HRSQFTFHTQCPITCLNTFRVMSTRQRSRTLNKDSPIWKTRTKIGDSQRRTKATTMMDWT 698
++ + T+ P + V S +++ D KT + DS+ T T +WT
Sbjct: 230 YKGRLTYRPYKPKGFHPSSNVFSVYEKTTQQRIDDSKVKTNGSVSDSEEETMETKFQNWT 289
Query: 699 VKDRSHSIRLG 731
+ D ++ +G
Sbjct: 290 LPDSDETLAVG 300
>Z66494-5|CAA91259.1| 473|Caenorhabditis elegans Hypothetical
protein C34C6.5a protein.
Length = 473
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/71 (21%), Positives = 30/71 (42%)
Frame = +3
Query: 519 HRSQFTFHTQCPITCLNTFRVMSTRQRSRTLNKDSPIWKTRTKIGDSQRRTKATTMMDWT 698
++ + T+ P + V S +++ D KT + DS+ T T +WT
Sbjct: 280 YKGRLTYRPYKPKGFHPSSNVFSVYEKTTQQRIDDSKVKTNGSVSDSEEETMETKFQNWT 339
Query: 699 VKDRSHSIRLG 731
+ D ++ +G
Sbjct: 340 LPDSDETLAVG 350
>AL132949-23|CAB70113.2| 152|Caenorhabditis elegans Hypothetical
protein Y53F4B.26 protein.
Length = 152
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 582 MSTRQRSRTLNKDS-PIWKTRTKIGDSQRRTKATTMMDWTVK 704
+S R RSRTL+ +S +WK + ++ + +++ MDW K
Sbjct: 43 VSRRTRSRTLSDNSNAVWKRERRSRETSQESESRLRMDWERK 84
>AL132949-6|CAB70102.1| 152|Caenorhabditis elegans Hypothetical
protein Y53F4B.7 protein.
Length = 152
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 582 MSTRQRSRTLNKDS-PIWKTRTKIGDSQRRTKATTMMDWTVK 704
+S R RSRTL+ +S +WK + ++ + +++ MDW K
Sbjct: 43 VSRRTRSRTLSDNSNAVWKRERRSRETSQESESRLRMDWERK 84
>AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical
protein ZK250.9 protein.
Length = 1466
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 582 MSTRQRSRTLNKDS-PIWKTRTKIGDSQRRTKATTMMDWTVK 704
+S R RSRTL+ +S +WK + ++ + +++ MDW K
Sbjct: 43 VSRRTRSRTLSDNSNAVWKRERRSRETSQESESRLRMDWERK 84
>AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical
protein Y16E11A.2 protein.
Length = 1466
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 582 MSTRQRSRTLNKDS-PIWKTRTKIGDSQRRTKATTMMDWTVK 704
+S R RSRTL+ +S +WK + ++ + +++ MDW K
Sbjct: 43 VSRRTRSRTLSDNSNAVWKRERRSRETSQESESRLRMDWERK 84
>AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical
protein F59H6.5 protein.
Length = 1486
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 582 MSTRQRSRTLNKDS-PIWKTRTKIGDSQRRTKATTMMDWTVK 704
+S R RSRTL+ +S +WK + ++ + +++ MDW K
Sbjct: 43 VSRRTRSRTLSDNSNAVWKRERRSRETSQESESRLRMDWERK 84
>Z81085-3|CAB03115.1| 769|Caenorhabditis elegans Hypothetical
protein F46F3.4 protein.
Length = 769
Score = 29.5 bits (63), Expect = 3.0
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Frame = +3
Query: 513 PH--HRSQFTFHTQCPITCLNTFRVMSTRQR--SRTLNKDSPIWKTRTKIGDSQRRTKAT 680
PH H S T + P L TF S Q+ S T+ +DSP + T GDS ++
Sbjct: 342 PHSNHSSPSTSSQKAPT--LITFSPPSFEQKINSSTMTRDSPFVERPTSFGDSLDESRLR 399
Query: 681 TMMDWTVKDRSHSIRLGQRMS 743
+ V RS S++ +R S
Sbjct: 400 SGKTDLVSLRSDSLKATKRRS 420
>Z81579-8|CAN86617.1| 930|Caenorhabditis elegans Hypothetical
protein R13H4.4b protein.
Length = 930
Score = 28.3 bits (60), Expect = 7.0
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Frame = +3
Query: 525 SQFTFHTQCPITCLNTFRVMSTRQRSRTL-NKDSP---IWKTRTKIGDSQRRTKATTMMD 692
S++T + + L T RV +R+ L N+ W +TK + A T++
Sbjct: 569 SEYTETVKQAVRILKTQRVDQFAERASALANRQEAHGLTWDPKTKEEEMNEFINACTLVH 628
Query: 693 WTVKDRSHSIRLGQRMSLKDPHLQSNMDPV 782
VKD H++ + + M+ D ++ D V
Sbjct: 629 DAVKDIRHALLMNRSMNDVDSDVEYEADGV 658
>Z81579-7|CAB61019.1| 927|Caenorhabditis elegans Hypothetical
protein R13H4.4a protein.
Length = 927
Score = 28.3 bits (60), Expect = 7.0
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Frame = +3
Query: 525 SQFTFHTQCPITCLNTFRVMSTRQRSRTL-NKDSP---IWKTRTKIGDSQRRTKATTMMD 692
S++T + + L T RV +R+ L N+ W +TK + A T++
Sbjct: 569 SEYTETVKQAVRILKTQRVDQFAERASALANRQEAHGLTWDPKTKEEEMNEFINACTLVH 628
Query: 693 WTVKDRSHSIRLGQRMSLKDPHLQSNMDPV 782
VKD H++ + + M+ D ++ D V
Sbjct: 629 DAVKDIRHALLMNRSMNDVDSDVEYEADGV 658
>U13642-4|AAG00043.2| 687|Caenorhabditis elegans Hypothetical
protein ZC395.8 protein.
Length = 687
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 344 NRHRRRRWQLNYGYDYQPPRHYTERRDYYQNQQ 442
NR+ RW N DY PR+Y+ R + +NQ+
Sbjct: 600 NRNYDERWSRN---DYSNPRNYSNRSFHQRNQR 629
>AF016852-1|AAB94551.1| 927|Caenorhabditis elegans HMP-1 protein.
Length = 927
Score = 28.3 bits (60), Expect = 7.0
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Frame = +3
Query: 525 SQFTFHTQCPITCLNTFRVMSTRQRSRTL-NKDSP---IWKTRTKIGDSQRRTKATTMMD 692
S++T + + L T RV +R+ L N+ W +TK + A T++
Sbjct: 569 SEYTETVKQAVRILKTQRVDQFAERASALANRQEAHGLTWDPKTKEEEMNEFINACTLVH 628
Query: 693 WTVKDRSHSIRLGQRMSLKDPHLQSNMDPV 782
VKD H++ + + M+ D ++ D V
Sbjct: 629 DAVKDIRHALLMNRSMNDVDSDVEYEADGV 658
>U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical protein
F13B9.1c protein.
Length = 1609
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +2
Query: 644 QNWGFATSNESDYDDG--LDGKRPISFDKIRPKDVIKRPAPPVEHGSSQNEXSTKAP 808
Q GF T DY DG P + ++ V +PAPP +QN S + P
Sbjct: 1397 QEDGFMTP--PDYSDGPLTMASSPPTLPPVQSVPVSSKPAPPSAENQAQNSTSPQQP 1451
>U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical protein
F13B9.1b protein.
Length = 1614
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +2
Query: 644 QNWGFATSNESDYDDG--LDGKRPISFDKIRPKDVIKRPAPPVEHGSSQNEXSTKAP 808
Q GF T DY DG P + ++ V +PAPP +QN S + P
Sbjct: 1397 QEDGFMTP--PDYSDGPLTMASSPPTLPPVQSVPVSSKPAPPSAENQAQNSTSPQQP 1451
>U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical protein
F13B9.1a protein.
Length = 1632
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +2
Query: 644 QNWGFATSNESDYDDG--LDGKRPISFDKIRPKDVIKRPAPPVEHGSSQNEXSTKAP 808
Q GF T DY DG P + ++ V +PAPP +QN S + P
Sbjct: 1419 QEDGFMTP--PDYSDGPLTMASSPPTLPPVQSVPVSSKPAPPSAENQAQNSTSPQQP 1473
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,668,483
Number of Sequences: 27780
Number of extensions: 321805
Number of successful extensions: 805
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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