Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_C05
         (785 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    27   0.22 
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    27   0.22 
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    24   1.2  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    24   1.2  
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    23   2.1  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    23   2.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.7  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   4.8  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   4.8  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    22   4.8  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   8.4  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   8.4  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   8.4  

>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
 Frame = +3

Query: 333 TPRIRGRSASLE---PTGWTVSAASTRGPLTSASSAPRIWSQRNGPTLTFWSPTNSG*EP 503
           TP +R  S+SL    P    V +  T GPL+ A ++ +     +   +  W P      P
Sbjct: 69  TPDVRPPSSSLSYGGPVNDDVRSPGTPGPLSQAPASQQSLDASDPDAMGKWCPRREWSSP 128

Query: 504 DPSNVAS 524
             +  AS
Sbjct: 129 PDARAAS 135


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
 Frame = +3

Query: 333 TPRIRGRSASLE---PTGWTVSAASTRGPLTSASSAPRIWSQRNGPTLTFWSPTNSG*EP 503
           TP +R  S+SL    P    V +  T GPL+ A ++ +     +   +  W P      P
Sbjct: 225 TPDVRPPSSSLSYGGPVNDDVRSPGTPGPLSQAPASQQSLDASDPDAMGKWCPRREWSSP 284

Query: 504 DPSNVAS 524
             +  AS
Sbjct: 285 PDARAAS 291


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/33 (27%), Positives = 19/33 (57%)
 Frame = -2

Query: 574 VHRRGTIRQYFSVHYRHDATFEGSGSHPEFVGD 476
           +HRRG     FS+ ++ D  +   GS+ +++ +
Sbjct: 238 LHRRGHEIAVFSLTHKEDPNYWSQGSYDDWLAE 270


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/33 (27%), Positives = 19/33 (57%)
 Frame = -2

Query: 574 VHRRGTIRQYFSVHYRHDATFEGSGSHPEFVGD 476
           +HRRG     FS+ ++ D  +   GS+ +++ +
Sbjct: 245 LHRRGHEIAVFSLTHKEDPNYWSQGSYDDWLAE 277


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 631 PDVIDPDSRVAQRCIPEH 578
           PD  DPD+ + +RC   H
Sbjct: 105 PDKFDPDNFLPERCQQRH 122


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/45 (24%), Positives = 18/45 (40%)
 Frame = +2

Query: 563 TSVHAVLRNTTLCHPGVGVDDIRPLSDTLSGYLESLVLERSCDPD 697
           T  H V     +    + +DDI      L  Y+  L+ +  C P+
Sbjct: 10  TCAHVVFLEEYVIPDNIDIDDILSNERLLKNYVNCLLDKGRCTPE 54


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +3

Query: 306  GPPSSVPCWTPRIRGRSASLEPTGWTVSAA 395
            GP S    +   ++    + +P GW +SAA
Sbjct: 1957 GPASDKSAFADFVKELHEAFKPKGWLLSAA 1986


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -3

Query: 549 SIFLFTTATTLRSKGLALIRSSLVTRTSTLAHC 451
           ++F       + SKG  L  +S + +  T A+C
Sbjct: 67  TVFFVVLGAAVVSKGTTLFMTSQIKKNVTRAYC 99


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -3

Query: 549 SIFLFTTATTLRSKGLALIRSSLVTRTSTLAHC 451
           ++F       + SKG  L  +S + +  T A+C
Sbjct: 67  TVFFVVLGAAVVSKGTTLFMTSQIKKNVTRAYC 99


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 311 GPVCTSRGLPQHTDAS 264
           GPVC S  +  H DA+
Sbjct: 258 GPVCNSNNIWLHVDAA 273


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -3

Query: 354 SAPESSASSTGQNLGARLYEPRPSTTH 274
           S+P+ S+SS   +  AR+Y P  S  H
Sbjct: 43  SSPQHSSSSASTSPAARMY-PYVSAAH 68


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -3

Query: 354 SAPESSASSTGQNLGARLYEPRPSTTH 274
           S+P+ S+SS   +  AR+Y P  S  H
Sbjct: 43  SSPQHSSSSASTSPAARMY-PYVSAAH 68


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = -3

Query: 474 RTSTLAHCA-ATRSSGLKTPKSTVPLWMRRRQSSLSVPMTHSAPESSASS 328
           R  T +  A + RSS  +  +    +  R R +S+ +   + +PES+ S+
Sbjct: 378 RNGTFSTTANSCRSSTFRNNRDEYNVCFRPRNNSILIKNFNDSPESNRSN 427


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 776 PVATPPPCRPSRSIRTTI 723
           P +T  P  PSR + TT+
Sbjct: 404 PSSTKAPAPPSRDLTTTL 421


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/53 (16%), Positives = 23/53 (43%)
 Frame = -3

Query: 429 LKTPKSTVPLWMRRRQSSLSVPMTHSAPESSASSTGQNLGARLYEPRPSTTHR 271
           +  P+S V +W + R++     +     +S++ +T      +  +  P+   R
Sbjct: 164 INLPESRVQVWFKNRRAKCRQQLQQQQNKSASRTTTSPTKVKASKASPAAAPR 216


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,783
Number of Sequences: 336
Number of extensions: 4062
Number of successful extensions: 19
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)