Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_C04
         (859 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   2.3  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   4.1  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   4.1  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   4.1  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    21   9.4  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    21   9.4  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
 Frame = -2

Query: 609 RCFCCNGRNCCWDPT--EELE--GDCCKGCGDDAPDTKDLEGV 493
           R  C + +N C +PT  E +   G CCK C  D  D+  ++ +
Sbjct: 79  RVQCRSIKNECPEPTCDEPVHRPGRCCKTCPGDLYDSDIIQDI 121



 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 606 CFCCNGRNCCW 574
           CFC NG N C+
Sbjct: 696 CFCENGNNKCF 706


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 558 ILLSDPNNSSFRCNRN 605
           I+LSDPN +  + N N
Sbjct: 142 IILSDPNTNKLKLNTN 157


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = -3

Query: 584 TVVGIRQKNWKEIVVKD 534
           +V+  RQ+N+KEIVV +
Sbjct: 254 SVIAERQENFKEIVVPE 270


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = -3

Query: 584 TVVGIRQKNWKEIVVKD 534
           +V+  RQ+N+KEIVV +
Sbjct: 254 SVIAERQENFKEIVVPE 270


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +2

Query: 791 LCAALWGVN 817
           LCAAL+GVN
Sbjct: 99  LCAALYGVN 107


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +2

Query: 791 LCAALWGVN 817
           LCAAL+GVN
Sbjct: 99  LCAALYGVN 107


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,485
Number of Sequences: 336
Number of extensions: 3694
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23763101
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)