Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_C04
(859 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical pr... 83 3e-16
Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical pr... 83 3e-16
Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical pr... 83 3e-16
Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical pr... 83 3e-16
AF087133-1|AAD14595.1| 728|Caenorhabditis elegans alternatively... 83 3e-16
AF087132-1|AAD14594.1| 792|Caenorhabditis elegans alternatively... 83 3e-16
AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively... 83 3e-16
U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily ass... 29 3.2
U55365-8|AAA98573.2| 383|Caenorhabditis elegans Hypothetical pr... 29 5.6
U42841-14|AAC48172.3| 469|Caenorhabditis elegans Hypothetical p... 29 5.6
AC006693-6|AAF60383.2| 511|Caenorhabditis elegans Hypothetical ... 28 7.4
AC006693-4|AAF60381.2| 511|Caenorhabditis elegans Hypothetical ... 28 7.4
>Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical
protein ZC504.4d protein.
Length = 1072
Score = 82.6 bits (195), Expect = 3e-16
Identities = 39/57 (68%), Positives = 45/57 (78%), Gaps = 2/57 (3%)
Frame = +2
Query: 695 SHVNVNVTPT--GHDLSSDTPEIRKYKKRFNSEILCAALWGVNLLXGTENGLMLLDR 859
+ V VNVTP G +D PEIRKYKK+F+ EILCAALWGVNLL GT++GLMLLDR
Sbjct: 724 NQVQVNVTPNSNGTPAENDAPEIRKYKKKFSGEILCAALWGVNLLIGTDSGLMLLDR 780
>Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical
protein ZC504.4c protein.
Length = 1096
Score = 82.6 bits (195), Expect = 3e-16
Identities = 39/57 (68%), Positives = 45/57 (78%), Gaps = 2/57 (3%)
Frame = +2
Query: 695 SHVNVNVTPT--GHDLSSDTPEIRKYKKRFNSEILCAALWGVNLLXGTENGLMLLDR 859
+ V VNVTP G +D PEIRKYKK+F+ EILCAALWGVNLL GT++GLMLLDR
Sbjct: 748 NQVQVNVTPNSNGTPAENDAPEIRKYKKKFSGEILCAALWGVNLLIGTDSGLMLLDR 804
>Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical
protein ZC504.4b protein.
Length = 1082
Score = 82.6 bits (195), Expect = 3e-16
Identities = 39/57 (68%), Positives = 45/57 (78%), Gaps = 2/57 (3%)
Frame = +2
Query: 695 SHVNVNVTPT--GHDLSSDTPEIRKYKKRFNSEILCAALWGVNLLXGTENGLMLLDR 859
+ V VNVTP G +D PEIRKYKK+F+ EILCAALWGVNLL GT++GLMLLDR
Sbjct: 734 NQVQVNVTPNSNGTPAENDAPEIRKYKKKFSGEILCAALWGVNLLIGTDSGLMLLDR 790
>Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical
protein ZC504.4a protein.
Length = 1087
Score = 82.6 bits (195), Expect = 3e-16
Identities = 39/57 (68%), Positives = 45/57 (78%), Gaps = 2/57 (3%)
Frame = +2
Query: 695 SHVNVNVTPT--GHDLSSDTPEIRKYKKRFNSEILCAALWGVNLLXGTENGLMLLDR 859
+ V VNVTP G +D PEIRKYKK+F+ EILCAALWGVNLL GT++GLMLLDR
Sbjct: 739 NQVQVNVTPNSNGTPAENDAPEIRKYKKKFSGEILCAALWGVNLLIGTDSGLMLLDR 795
>AF087133-1|AAD14595.1| 728|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 728
Score = 82.6 bits (195), Expect = 3e-16
Identities = 39/57 (68%), Positives = 45/57 (78%), Gaps = 2/57 (3%)
Frame = +2
Query: 695 SHVNVNVTPT--GHDLSSDTPEIRKYKKRFNSEILCAALWGVNLLXGTENGLMLLDR 859
+ V VNVTP G +D PEIRKYKK+F+ EILCAALWGVNLL GT++GLMLLDR
Sbjct: 380 NQVQVNVTPNSNGTPAENDAPEIRKYKKKFSGEILCAALWGVNLLIGTDSGLMLLDR 436
>AF087132-1|AAD14594.1| 792|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 792
Score = 82.6 bits (195), Expect = 3e-16
Identities = 39/57 (68%), Positives = 45/57 (78%), Gaps = 2/57 (3%)
Frame = +2
Query: 695 SHVNVNVTPT--GHDLSSDTPEIRKYKKRFNSEILCAALWGVNLLXGTENGLMLLDR 859
+ V VNVTP G +D PEIRKYKK+F+ EILCAALWGVNLL GT++GLMLLDR
Sbjct: 444 NQVQVNVTPNSNGTPAENDAPEIRKYKKKFSGEILCAALWGVNLLIGTDSGLMLLDR 500
>AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 1087
Score = 82.6 bits (195), Expect = 3e-16
Identities = 39/57 (68%), Positives = 45/57 (78%), Gaps = 2/57 (3%)
Frame = +2
Query: 695 SHVNVNVTPT--GHDLSSDTPEIRKYKKRFNSEILCAALWGVNLLXGTENGLMLLDR 859
+ V VNVTP G +D PEIRKYKK+F+ EILCAALWGVNLL GT++GLMLLDR
Sbjct: 739 NQVQVNVTPNSNGTPAENDAPEIRKYKKKFSGEILCAALWGVNLLIGTDSGLMLLDR 795
>U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily assigned
gene nameprotein 162 protein.
Length = 2643
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -2
Query: 603 FCCNGRNCCWDPTEELEGDCCK 538
F C+G++ C+D T+ELE C K
Sbjct: 986 FICDGKSDCYDGTDELEKICKK 1007
>U55365-8|AAA98573.2| 383|Caenorhabditis elegans Hypothetical
protein C12D5.2 protein.
Length = 383
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +3
Query: 450 YPTTIITRHLPLCNPRLPNLS----YRVRHRRILYNNLLPILLSDPNNSS 587
Y ++ + + +CNP +PNLS Y++ R Y+ +L + NSS
Sbjct: 282 YIEYLLLKMIFICNPAIPNLSSNAQYKLEKGRSFYSEMLLVYCLQSLNSS 331
>U42841-14|AAC48172.3| 469|Caenorhabditis elegans Hypothetical
protein T17H7.7 protein.
Length = 469
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 630 SAPALPEAEVQAAPVGTLPAERAT*TSTSRPQDTTSLPIHPR--YENIRRDLTLR 788
S P + +++ +A+PV T PA A T+RP L H R +E + D R
Sbjct: 381 SEPDVTKSKYEASPVATSPATLAPAQVTTRPVAPPRLNYHERTDFERLASDYRRR 435
>AC006693-6|AAF60383.2| 511|Caenorhabditis elegans Hypothetical
protein W02H5.3 protein.
Length = 511
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -1
Query: 778 KSLLIFSYLGCIGREVVSCGRDVDVHVALSAGSVPTG 668
K L++ S+ GC + D ++H +GS+P+G
Sbjct: 435 KDLILQSFKGCGLTTAIGGSEDYEIHCFKPSGSIPSG 471
>AC006693-4|AAF60381.2| 511|Caenorhabditis elegans Hypothetical
protein W02H5.4 protein.
Length = 511
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -1
Query: 778 KSLLIFSYLGCIGREVVSCGRDVDVHVALSAGSVPTG 668
K L++ S+ GC + D ++H +GS+P+G
Sbjct: 435 KDLILQSFKGCGLTTAIGGSEDYEIHCFKPSGSIPSG 471
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,701,397
Number of Sequences: 27780
Number of extensions: 354812
Number of successful extensions: 966
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 965
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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