Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_C03
(758 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_9150| Best HMM Match : PspA_IM30 (HMM E-Value=0.98) 42 7e-04
SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_29636| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.027
SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91) 35 0.062
SB_50497| Best HMM Match : CH (HMM E-Value=0.0084) 34 0.14
SB_32406| Best HMM Match : VWA (HMM E-Value=8.8e-32) 34 0.14
SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84) 34 0.14
SB_20305| Best HMM Match : PT (HMM E-Value=1.8) 33 0.19
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_8499| Best HMM Match : DUF229 (HMM E-Value=0) 32 0.58
SB_53221| Best HMM Match : zf-CCHC (HMM E-Value=0.061) 31 0.77
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 31 1.0
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 30 1.8
SB_8334| Best HMM Match : MIB_HERC2 (HMM E-Value=0) 30 1.8
SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032) 30 2.3
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_14171| Best HMM Match : Chitin_synth_2 (HMM E-Value=7.7e-07) 30 2.3
SB_10354| Best HMM Match : AT_hook (HMM E-Value=0.045) 30 2.3
SB_5549| Best HMM Match : PT (HMM E-Value=1.9) 30 2.3
SB_23499| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 29 3.1
SB_45009| Best HMM Match : RCC1 (HMM E-Value=7.6e-21) 29 3.1
SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011) 29 3.1
SB_41173| Best HMM Match : Sas10_Utp3 (HMM E-Value=2.8) 29 5.4
SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35) 29 5.4
SB_8818| Best HMM Match : I-set (HMM E-Value=0) 29 5.4
SB_34673| Best HMM Match : UK (HMM E-Value=0.6) 28 7.2
SB_24403| Best HMM Match : BRF1 (HMM E-Value=1.2) 28 7.2
SB_54710| Best HMM Match : Linker_histone (HMM E-Value=6e-38) 28 9.5
SB_42| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_52883| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_32568| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_17676| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
>SB_9150| Best HMM Match : PspA_IM30 (HMM E-Value=0.98)
Length = 242
Score = 41.5 bits (93), Expect = 7e-04
Identities = 33/111 (29%), Positives = 49/111 (44%)
Frame = +3
Query: 426 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 605
E P EA+S D KVE P + E + EV+ATV E+ + +A E A +P +
Sbjct: 22 ETPIEEAESPDKKVEAPIEEAEAPEEEVEATVEEVEAPMEEAAASVE-----EAEVP--I 74
Query: 606 KKIDLAPNVXSDAAAVPEIKTPEAADAPKLADNPVXEDKPADISPDAPKAE 758
+K + P E EA A + + PV E + + +AP E
Sbjct: 75 EKAETQPVDTEGPVENAETSFEEAEAADEETEEPVKEAEGSFEEAEAPVVE 125
>SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
Frame = +3
Query: 438 AEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKP-SATDAEGSADSAAIIPNMVKKI 614
A + A++ +EE Q ED++ V+ A + K E P T+A D A K +
Sbjct: 1172 ASVEEAEVPIEEAETQAEDTEGPVEDAEASVQKAEAPVEETEAPFEEDEAP-AEKTEKPV 1230
Query: 615 DLAPNVXSDAAAVPEIKTP--EAADAPKLADNPVXEDKPAD 731
+ P+V A V E + P EA + A++P + P +
Sbjct: 1231 EAGPSVQEAEAPVKETERPVEEAEVQAEEAESPAEKGAPVE 1271
Score = 32.3 bits (70), Expect = 0.44
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Frame = +3
Query: 420 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPN 599
++E+P +A ++ + E PAA+PE + E +A V + + EE P A + E + D
Sbjct: 587 TAEVPIEDADTSTEEAESPAAEPEVAVKEAEAPVEDDAFEE-PEALN-EKAEDPKDEDET 644
Query: 600 MVKKIDLAPNVXSDAAAVPEIKTPEAA---DAPKLADNPVXEDKPADI 734
+K ++ P ++A A E+ E A +A L + E+ A I
Sbjct: 645 QEEKAEV-PIDEAEAEAQAEVAGEEKALEEEAETLVEETKVEEDKAPI 691
Score = 30.7 bits (66), Expect = 1.3
Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 5/111 (4%)
Frame = +3
Query: 441 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 620
+ K D EE A P D + E +A AE++ EEK +AE + + + +
Sbjct: 637 DPKDEDETQEEKAEVPID-EAEAEAQ-AEVAGEEKALEEEAETLVEETKVEEDKAPIQEA 694
Query: 621 APNVXSDAAAVPEIKTP-----EAADAPKLADNPVXEDKPADISPDAPKAE 758
+V A V EI+ P E K D PV E + +AP E
Sbjct: 695 EASVKKAEATVEEIEAPIERAKEVEAQSKEVDAPVKEAEAPAGEAEAPVEE 745
>SB_29636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 36.3 bits (80), Expect = 0.027
Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 4/118 (3%)
Frame = +3
Query: 417 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 596
+ +++ E ++ D+ +EP + E +A+ E K T+ A+ P
Sbjct: 165 EENDMGGTEEENPDVPSDEPLTGGTEEDDEKEASEEEEGKPSLEDGTEDTPEANKTPEEP 224
Query: 597 NMVKKIDLAPNVXSDAAAVP----EIKTPEAADAPKLADNPVXEDKPADISPDAPKAE 758
+K+ + V E++ P+ ++PK D P ED P + D PK E
Sbjct: 225 KEDEKVTEEETPKEETPKVEDAPEEVEAPKEEESPKEEDTPKEEDAPKE---DTPKEE 279
>SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91)
Length = 1249
Score = 35.1 bits (77), Expect = 0.062
Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 11/143 (7%)
Frame = +3
Query: 315 IPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKS-ADIKVEEPAAQ-P 488
+P D + P SD+ + ++ KS +D +V P++ P
Sbjct: 591 VPTTSDDQVTPSASDVPTTSDDQVTPSASDVPTTSDDQPSASDVKSTSDDQVTPPSSDVP 650
Query: 489 EDSKTEVQATVAEISKEEK----PSATDAEGSAD-----SAAIIPNMVKKIDLAPNVXSD 641
S +V + +++ PSA+D ++D SA+ +P + P+
Sbjct: 651 TTSDDQVTPSASDVPTTSDDHVTPSASDVPTTSDDQVTPSASDVP-AASDNQVTPSASDV 709
Query: 642 AAAVPEIKTPEAADAPKLADNPV 710
+A + TP A D P +DN V
Sbjct: 710 PSASDDQVTPSAIDVPTTSDNQV 732
Score = 31.9 bits (69), Expect = 0.58
Identities = 33/151 (21%), Positives = 59/151 (39%), Gaps = 10/151 (6%)
Frame = +3
Query: 294 SNDEV--PA--IPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADI 461
S+D+V PA +P A + + P SD+ +S++P
Sbjct: 818 SDDQVTPPASDVPTASDNQVTPSASDVPTTSDDHVT--------PSASDVPTTSDDQVTP 869
Query: 462 KVEEPAAQPEDSKTEVQATVAEISKEE-KPSATDAEGSAD-----SAAIIPNMVKKIDLA 623
+ +D T + V S ++ PSA+D ++D SA+ +P +
Sbjct: 870 SASDVTPTSDDQVTPSSSDVTPTSDDQVTPSASDVPTASDDQVTQSASNVPTASDN-QVT 928
Query: 624 PNVXSDAAAVPEIKTPEAADAPKLADNPVXE 716
P+ A + TP A+D P +D+ V +
Sbjct: 929 PSASDVLTAKDDHVTPSASDVPTTSDDQVTQ 959
Score = 29.5 bits (63), Expect = 3.1
Identities = 27/137 (19%), Positives = 46/137 (33%), Gaps = 5/137 (3%)
Frame = +3
Query: 315 IPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEEPAAQPED 494
+P A D + P D+ +S++P A + +D
Sbjct: 709 VPSASDDQVTPSAIDVPTTSDNQVT--------PSASDVPTASDDQVTPSASDVPTTSDD 760
Query: 495 SKTEVQATVAEISKEE-KPSATDAEGSADSAAIIPNMVKKIDLAPNVXSDAAAVPEIK-- 665
T + V S ++ P A+D ++D P + ++ VP
Sbjct: 761 QVTPSASDVMSTSDDQVTPPASDVMSTSDDQVTPPASDVPTTSDDQITPSSSDVPATSDD 820
Query: 666 --TPEAADAPKLADNPV 710
TP A+D P +DN V
Sbjct: 821 QVTPPASDVPTASDNQV 837
>SB_50497| Best HMM Match : CH (HMM E-Value=0.0084)
Length = 2086
Score = 33.9 bits (74), Expect = 0.14
Identities = 47/212 (22%), Positives = 76/212 (35%), Gaps = 14/212 (6%)
Frame = +3
Query: 156 AMPVAEEKDVVPAQPILEVAPKIDDSXXXXXXXXXXXXXXXXXXXXSN------DEVPA- 314
++P E +V A+P E P +S SN +EVP
Sbjct: 1321 SVPQGEAPEVDIAEPTSEETPVEGESLEAQAVGHVEAAGEETSPVQSNQIESTVEEVPTD 1380
Query: 315 IP-EAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEEPAAQPE 491
+P E+ ++ P SDI + EI ++ + +++ AAQ +
Sbjct: 1381 VPTESPSAEVKPVQSDIVESTSDEAPAEDLVE--SHKEEIMPVQSDAIQSTLDKEAAQSK 1438
Query: 492 ---DSKTEVQATVAEIS--KEEKPS-ATDAEGSADSAAIIPNMVKKIDLAPNVXSDAAAV 653
S EVQA V+ S KE P + + + + + ++D S A
Sbjct: 1439 VIASSPEEVQADVSVESPNKETLPGQSVHIDSTQEEVPVEAQPESRVDQNQTPESLLPAE 1498
Query: 654 PEIKTPEAADAPKLADNPVXEDKPADISPDAP 749
+ PE AP P P+D+SP P
Sbjct: 1499 YLVAPPEEQPAPAAEPEPSPGGSPSDLSPTDP 1530
>SB_32406| Best HMM Match : VWA (HMM E-Value=8.8e-32)
Length = 1074
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 4/92 (4%)
Frame = +3
Query: 468 EEPA--AQPEDSKTEVQATVAEISKEEK--PSATDAEGSADSAAIIPNMVKKIDLAPNVX 635
E+P+ +P + K +++A E + + K P A G D+ P V
Sbjct: 85 EKPSLDTKPAEDKPKIEAAKQEATADNKAEPKKEQASGIKDAPEATPKKGADKATPKEVE 144
Query: 636 SDAAAVPEIKTPEAADAPKLADNPVXEDKPAD 731
+ V + +A K NP EDKPA+
Sbjct: 145 ASGDEVASEAEAKPVEAAKTESNPAKEDKPAE 176
>SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84)
Length = 944
Score = 33.9 bits (74), Expect = 0.14
Identities = 47/212 (22%), Positives = 76/212 (35%), Gaps = 14/212 (6%)
Frame = +3
Query: 156 AMPVAEEKDVVPAQPILEVAPKIDDSXXXXXXXXXXXXXXXXXXXXSN------DEVPA- 314
++P E +V A+P E P +S SN +EVP
Sbjct: 216 SVPQGEAPEVDIAEPTSEETPVEGESLEAQAVGHVEAAGEETSPVQSNQIESTVEEVPTD 275
Query: 315 IP-EAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEEPAAQPE 491
+P E+ ++ P SDI + EI ++ + +++ AAQ +
Sbjct: 276 VPTESPSAEVKPVQSDIVESTSDEAPAEDLVE--SHKEEIMPVQSDAIQSTLDKEAAQSK 333
Query: 492 ---DSKTEVQATVAEIS--KEEKPS-ATDAEGSADSAAIIPNMVKKIDLAPNVXSDAAAV 653
S EVQA V+ S KE P + + + + + ++D S A
Sbjct: 334 VIASSPEEVQADVSVESPNKETLPGQSVHIDSTQEEVPVEAQPESRVDQNQTPESLLPAE 393
Query: 654 PEIKTPEAADAPKLADNPVXEDKPADISPDAP 749
+ PE AP P P+D+SP P
Sbjct: 394 YLVAPPEEQPAPAAEPEPSPGGSPSDLSPTDP 425
>SB_20305| Best HMM Match : PT (HMM E-Value=1.8)
Length = 127
Score = 33.5 bits (73), Expect = 0.19
Identities = 32/107 (29%), Positives = 42/107 (39%), Gaps = 2/107 (1%)
Frame = +3
Query: 438 AEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKID 617
+E KS D ++P +PED + E E+KP + D P K++
Sbjct: 25 SEDKSGDKPQDKPENKPEDQPEDKPGDKPEDKTEDKPEDKPEDKPEDKPEDKPE--DKLE 82
Query: 618 LAPNVXSDAAAV--PEIKTPEAADAPKLADNPVXEDKPADISPDAPK 752
P S+ PE K PE K D P EDKP D PK
Sbjct: 83 DKPEDSSEEKPEDNPEDK-PEYKPEDKPEDKP--EDKPECKPEDKPK 126
>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2388
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/73 (23%), Positives = 36/73 (49%)
Frame = +3
Query: 444 AKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLA 623
AKS D+K E A++ ++ T+ ++ K+ KP++ + A +A + N K +++
Sbjct: 1912 AKSKDVKNAEEASRNDEDDTKTGNVSEDLIKQAKPTSKTRKKRASLSAKVTNFEKTVNVD 1971
Query: 624 PNVXSDAAAVPEI 662
S +P +
Sbjct: 1972 VESQSSERELPRV 1984
>SB_8499| Best HMM Match : DUF229 (HMM E-Value=0)
Length = 926
Score = 31.9 bits (69), Expect = 0.58
Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 2/110 (1%)
Frame = +3
Query: 432 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKE-EKPSATDAEGSADSAAIIPNMVK 608
P+A +A + + AQPE Q E + + E P AT A A A P +
Sbjct: 353 PEAPGATAQPEAPDATAQPEAPDATAQPEATETTAQPEAPKAT-ALPEAPKATAQPEAPE 411
Query: 609 KIDLAPNVXSDAAAVPEIKTPEAADAPKLADNPVX-EDKPADISPDAPKA 755
A A A+PE PEA P+ + + + A P+AP+A
Sbjct: 412 A--TAQPEAPKATALPE--APEATAQPEATETTAQPKAQKATAQPEAPEA 457
Score = 31.5 bits (68), Expect = 0.77
Identities = 32/109 (29%), Positives = 45/109 (41%), Gaps = 2/109 (1%)
Frame = +3
Query: 432 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISK-EEKPSATDAEGSADSAAIIPNMVK 608
P+A +A + + AQPE ++T Q + + E P AT A+ A A P K
Sbjct: 362 PEAPDATAQPEAPDATAQPEATETTAQPEAPKATALPEAPKAT-AQPEAPEATAQPEAPK 420
Query: 609 KIDLAPNVXSDAAAVPE-IKTPEAADAPKLADNPVXEDKPADISPDAPK 752
L +A A PE +T A K P E A P+AP+
Sbjct: 421 ATALPE--APEATAQPEATETTAQPKAQKATAQP--EAPEATAQPEAPE 465
Score = 31.1 bits (67), Expect = 1.0
Identities = 23/95 (24%), Positives = 34/95 (35%)
Frame = +3
Query: 312 AIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEEPAAQPE 491
A PEA PE D K++ +P+A +A + E AQPE
Sbjct: 360 AQPEAPDATAQPEAPD--ATAQPEATETTAQPEAPKATALPEAPKATAQPEAPEATAQPE 417
Query: 492 DSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 596
K E + + + + T A+ A A P
Sbjct: 418 APKATALPEAPEATAQPEATETTAQPKAQKATAQP 452
>SB_53221| Best HMM Match : zf-CCHC (HMM E-Value=0.061)
Length = 410
Score = 31.5 bits (68), Expect = 0.77
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +3
Query: 435 DAEAKSADIKVEEPAAQPEDSKT----EVQATVAEISKEEKPSATDAEGSADSAAIIP 596
DAE S+ I V P+AQ E +T V + +A ++ E D+ D AIIP
Sbjct: 285 DAEPASSSISVSVPSAQAEQGRTTEGRPVSSDIATVAMEVPEVQGDSLADVDIDAIIP 342
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Frame = +3
Query: 465 VEEPAAQPEDSKTEVQATV--AEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 626
+E PA ED KT+ +AT AE+ +E KP+A D + SA S ++ I+++P
Sbjct: 1129 LESPA---EDVKTDFEATSLEAEVFEEYKPTAKDVKESASSTV---HLAADIEISP 1178
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 30.3 bits (65), Expect = 1.8
Identities = 27/111 (24%), Positives = 44/111 (39%)
Frame = +3
Query: 414 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 593
AK + +A K A + + V ATVA S + T + S D+A +I
Sbjct: 1732 AKITPKASTDAAKVTPKASTEATEMTQKFSNVPATVALKSSNVEAKITP-KSSTDAARLI 1790
Query: 594 PNMVKKIDLAPNVXSDAAAVPEIKTPEAADAPKLADNPVXEDKPADISPDA 746
P K + NV S ++ TP+A+ + + D ++P A
Sbjct: 1791 PKASKSSTGSVNVKSRSSTNATQITPKASTGTQKVRHKSSTDAVKKVTPKA 1841
>SB_8334| Best HMM Match : MIB_HERC2 (HMM E-Value=0)
Length = 636
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +3
Query: 417 KSSEIPDAEAKSADIKVEEPAA-QPEDSKT-EV---QATVAEISKEEKPSATDAEGSADS 581
K + D + S+D +E A +P S T EV T A + EE+PS TD EGS +
Sbjct: 359 KQTTAHDPTSSSSDQLIEHSVAGRPSPSVTPEVAREDCTQASLQLEERPSNTDGEGSGQT 418
>SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032)
Length = 521
Score = 29.9 bits (64), Expect = 2.3
Identities = 31/102 (30%), Positives = 39/102 (38%)
Frame = +3
Query: 447 KSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 626
KS D +P +PED + Q E E+KP + D K P
Sbjct: 418 KSKDKLEVKPEDRPEDKPEDKQQNKPEDKPEDKPEDKPEDKPEDKPE------DKQQNKP 471
Query: 627 NVXSDAAAVPEIKTPEAADAPKLADNPVXEDKPADISPDAPK 752
+ PE K PE KL D P EDKP + S D P+
Sbjct: 472 KYKPEDK--PEDK-PEDKPKDKLEDRP--EDKPEEKSKDNPE 508
Score = 28.7 bits (61), Expect = 5.4
Identities = 28/95 (29%), Positives = 38/95 (40%)
Frame = +3
Query: 468 EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVXSDAA 647
++P +PED+ + E E KP + S D P K D + D
Sbjct: 3 DKPEDKPEDTPEDKPEDKPEGKPEGKPEGKPKDKSGDKPEDKPEN-KPEDQPEDKPGDK- 60
Query: 648 AVPEIKTPEAADAPKLADNPVXEDKPADISPDAPK 752
PE KT + + K D P EDKP D D P+
Sbjct: 61 --PEDKTEDKPE-DKPEDKP--EDKPEDKPGDKPE 90
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 29.9 bits (64), Expect = 2.3
Identities = 22/115 (19%), Positives = 43/115 (37%), Gaps = 5/115 (4%)
Frame = +3
Query: 414 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 593
++++E P E +PE + AE + + + + A +
Sbjct: 5112 SETTEAPGTTVAPETTMAPETTVEPETTMALETTVAAETTMAPETTVSPETTEAPGTTVA 5171
Query: 594 PN--MVKKIDLAPNVX-SDAAAVPEIKT--PEAADAPKLADNPVXEDKPADISPD 743
P M + +AP + VP+ T PE+ +AP+ P + P +P+
Sbjct: 5172 PETTMAPETTVAPETTMAPETTVPQETTIAPESTEAPETTRAPESTEAPETTAPE 5226
>SB_14171| Best HMM Match : Chitin_synth_2 (HMM E-Value=7.7e-07)
Length = 1188
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +3
Query: 432 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAA 587
PD +A + + + + P +Q EDS + T +S EE+P ++ S SAA
Sbjct: 915 PDPQAPATNNQTDNPPSQYEDSSS--SETNGVLSDEEQPPLPLSDSSIQSAA 964
>SB_10354| Best HMM Match : AT_hook (HMM E-Value=0.045)
Length = 191
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 423 SEIPDAE-AKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSA 575
S++P + AK+A+ + E+ A PE+ E A E K ++ D EG+A
Sbjct: 50 SKMPSKKGAKAAEAQPEKKAEAPEEKPAEDSKDQAVEESETKDASKDGEGNA 101
>SB_5549| Best HMM Match : PT (HMM E-Value=1.9)
Length = 282
Score = 29.9 bits (64), Expect = 2.3
Identities = 30/106 (28%), Positives = 42/106 (39%)
Frame = +3
Query: 441 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 620
+AKS D + P PED K E + E E+KP + D + P K D
Sbjct: 177 KAKSEDKPEDMPEDMPED-KPEYR---PEYKPEDKPEKKPEKKPEDKSEDKPEDKHK-DK 231
Query: 621 APNVXSDAAAVPEIKTPEAADAPKLADNPVXEDKPADISPDAPKAE 758
+ D + + PE D P+ EDKP D D P+ +
Sbjct: 232 PEDKLEDKPEDKKEEKPE--DNPEEKPEDKQEDKPEDKQEDKPECK 275
Score = 29.5 bits (63), Expect = 3.1
Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 2/97 (2%)
Frame = +3
Query: 468 EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVXSDAA 647
++P +PED + E E+KP A + D +P K + P +
Sbjct: 150 DKPEDKPEDKPEDKLEGKPENKPEKKPKAKSEDKPEDMPEDMPE--DKPEYRPEYKPEDK 207
Query: 648 AVPEIKTPEAADAPKLADNP--VXEDKPADISPDAPK 752
PE K PE K D P +DKP D D P+
Sbjct: 208 --PE-KKPEKKPEDKSEDKPEDKHKDKPEDKLEDKPE 241
>SB_23499| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/84 (22%), Positives = 32/84 (38%)
Frame = +3
Query: 471 EPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVXSDAAA 650
+PA+QP A+ +P++ A A A P A S A+
Sbjct: 46 QPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPAS 105
Query: 651 VPEIKTPEAADAPKLADNPVXEDK 722
P ++ A + P++ + V E K
Sbjct: 106 QPASQSASAQNKPRIVEKEVLEKK 129
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 29.5 bits (63), Expect = 3.1
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +3
Query: 417 KSSEIPDAEAKSADIKVEEPAA-QPEDSK-TEVQATVAEISKEEKPSA-TDAEGSADSAA 587
K + D E K + + E+ + E +K TEVQ V E +KEE PS DAE A
Sbjct: 1025 KKRKDSDKERKVKEKEEEQKVKIEKEPNKVTEVQLMVEETNKEESPSTDRDAESELPKAG 1084
Query: 588 IIPNMVKKIDLAPN 629
+ ++ P+
Sbjct: 1085 SVSALLSVFATEPS 1098
>SB_45009| Best HMM Match : RCC1 (HMM E-Value=7.6e-21)
Length = 595
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -2
Query: 547 GFSSFEISATVACTSVFESSG*AAGSSTLISADFASASGISDDF 416
G SS ++ +C+SVFE + A SS L AD + + IS ++
Sbjct: 498 GGSSSQMDVMGSCSSVFEQAMLAGESSNLSDADKSESKDISKNY 541
>SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011)
Length = 812
Score = 29.5 bits (63), Expect = 3.1
Identities = 25/108 (23%), Positives = 41/108 (37%), Gaps = 5/108 (4%)
Frame = +3
Query: 420 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP- 596
S + P E K D+K +D T ++ + +E KP + A A P
Sbjct: 255 SGDAPHHEEKKEDLKEVVIKQSKQDEATAIKDSKSESKPASKPKLKAVQNDAPKKANKPA 314
Query: 597 -NMVKKIDLAPNVXSDAA--AVPE-IKTPEAADAPKLADNPVXEDKPA 728
K + A V + +P P +A+A + NP + +PA
Sbjct: 315 KKAKKPVKRAKKVLNKKKMDTLPRGAHRPASANAQRRPQNPYAQQRPA 362
>SB_41173| Best HMM Match : Sas10_Utp3 (HMM E-Value=2.8)
Length = 405
Score = 28.7 bits (61), Expect = 5.4
Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 6/103 (5%)
Frame = +3
Query: 435 DAEAKSADIKVEEPAAQPEDSKTEVQATV--AEISKEEKPSATDAEGSADSAAIIPNMVK 608
D E S E + +P+DS + +AT E + +E D +G A S N
Sbjct: 77 DTEKPSESTGEAEQSEEPKDSTVDSKATPDSEENATKETSDQVDPQGDAGSDVKGENTES 136
Query: 609 K--IDLAPNVX-SDAAAVPEIKTPEAADAPKLADNPVXE-DKP 725
+ + P ++ +A E+K E + D PV E +KP
Sbjct: 137 EGAKEAEPVAEKTETSATEEVKASEQVSEKEKPDKPVLEAEKP 179
>SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35)
Length = 1078
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 12 WQSQRSHIKLIFYLNNLCQCFKKRRRVTGSIFKMKVLLL 128
W+S R+ I + N +C+KKR +V GS + V +L
Sbjct: 792 WKSYRNTILIQNQSNETVRCYKKRLKVKGSEDNVNVSVL 830
>SB_8818| Best HMM Match : I-set (HMM E-Value=0)
Length = 2787
Score = 28.7 bits (61), Expect = 5.4
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Frame = +3
Query: 423 SEIPDAEAKSADI-KVEEPAAQ-PEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 596
+E P E K + KVE+P + PE K EV+ V+ KP G + P
Sbjct: 1013 NEKPVEEEKQPEKPKVEKPEVEEPEVEKPEVEEPVSG-----KPEVETPVGEVPQEVLAP 1067
Query: 597 NMVKKIDLAPNVXSDAAAVPEIKTPEAADA 686
V+ ++ AP D P + P+ DA
Sbjct: 1068 VTVEVVETAPITLEDMK--PTGEAPKVVDA 1095
>SB_34673| Best HMM Match : UK (HMM E-Value=0.6)
Length = 641
Score = 28.3 bits (60), Expect = 7.2
Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 2/116 (1%)
Frame = +3
Query: 417 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 596
++++ PD ++ D+ P E + + A + TD + P
Sbjct: 207 EATDEPDRPQETTDV----PGRSQEVTNAPDRQQEANDVSDRPQETTDVPDRSQEVTNTP 262
Query: 597 NMVKKIDLAPNVXSDAAAVPEI--KTPEAADAPKLADNPVXEDKPADISPDAPKAE 758
+ ++ + AP+ P+ KT + D P A + + AD +PD P+ E
Sbjct: 263 DRPQEANDAPDRPEKTIDAPDRSQKTTDTPDRPHEATDEPDRSQEADDTPDRPQKE 318
>SB_24403| Best HMM Match : BRF1 (HMM E-Value=1.2)
Length = 623
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/108 (19%), Positives = 47/108 (43%), Gaps = 2/108 (1%)
Frame = +3
Query: 441 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK--I 614
+ + D K++ E + ++ + + E S ++E S +++A K
Sbjct: 98 QTRIQDAKMDSEIVSKESERKKLSPEIGD-GIREVASEENSEKSIETSAASETATKSPST 156
Query: 615 DLAPNVXSDAAAVPEIKTPEAADAPKLADNPVXEDKPADISPDAPKAE 758
+ + SD V EI + + D+ K++ NP +P D++ P ++
Sbjct: 157 ENTGSTKSDKDDVVEISSDD--DSDKISANPTDVQEPMDLTAPKPDSD 202
>SB_54710| Best HMM Match : Linker_histone (HMM E-Value=6e-38)
Length = 234
Score = 27.9 bits (59), Expect = 9.5
Identities = 34/117 (29%), Positives = 49/117 (41%), Gaps = 6/117 (5%)
Frame = +3
Query: 420 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDA--EGSADSAAII 593
S E+ DAE + K E+PA P+ S V A A KE S+ A + + +
Sbjct: 45 SIEMSDAEKPAKAKKPEKPAEHPKYSDMVVAAIGA--LKERNGSSRQAIEKYIKGNYKVG 102
Query: 594 PNMVKKIDLAPNVXSDAAAVPEIKTPEAADAPKL----ADNPVXEDKPADISPDAPK 752
N+ ++ LA SD + K A+ + KL + P KPA P A K
Sbjct: 103 DNVGVQLKLALKRMSDKGKLAHTKGVGASGSFKLNKAAVEKPKKAKKPASKKPKAAK 159
>SB_42| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1207
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +3
Query: 597 NMVKKIDLAPNVXSDAAAVPEIKTPEAADAPKLADNPVXEDKPADISPDA 746
N V DL N ++ + +P E D P +D P P D+SP++
Sbjct: 909 NKVTNSDLTIN--TNQSTLPREPVNEGYDNPTFSDYPDGSPSPKDVSPES 956
>SB_52883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1434
Score = 27.9 bits (59), Expect = 9.5
Identities = 23/96 (23%), Positives = 38/96 (39%)
Frame = +3
Query: 465 VEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVXSDA 644
++E QP K Q + KE+ +DA G S A + + +K D+ ++
Sbjct: 1195 LQETPKQPRKQKDHKQTKQQQAGKEQSLLFSDALGDIGSIAQLGAVQRKSDIMQSL---- 1250
Query: 645 AAVPEIKTPEAADAPKLADNPVXEDKPADISPDAPK 752
P++ D L +NP K P+ PK
Sbjct: 1251 --------PKSQDDILLEENPTVATKDRTPQPEEPK 1278
>SB_32568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1918
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/57 (24%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +3
Query: 450 SADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII--PNMVKKI 614
SA + A++ D ++++ + A+ K+E+ SAT + ++S+ ++ P+ ++KI
Sbjct: 196 SATHRTLSAASRDLDKRSDISLSSAKPEKQEQESATVEQPESESSTMVLYPHQIQKI 252
>SB_17676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1271
Score = 27.9 bits (59), Expect = 9.5
Identities = 35/119 (29%), Positives = 50/119 (42%), Gaps = 8/119 (6%)
Frame = +3
Query: 414 AKSSEIPDAEAKSADIKV-EEPAAQPEDSKTEVQ----ATVAEISKE-EKPSAT--DAEG 569
A S A+A S V EE A+ E K EV + ++ IS + + AT DA G
Sbjct: 254 AASGYASGADAASGSNAVPEEVASGFEGRKDEVTLESGSGMSFISGDNDSAEATLEDATG 313
Query: 570 SADSAAIIPNMVKKIDLAPNVXSDAAAVPEIKTPEAADAPKLADNPVXEDKPADISPDA 746
+ +P I A N+ D A I + + APKL DN E + ++ A
Sbjct: 314 ESGDEDFLPG---SIGGATNLQQDEAKAQTISSGSGSAAPKLTDNAAKEVQQTPVAQAA 369
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,225,157
Number of Sequences: 59808
Number of extensions: 290105
Number of successful extensions: 1431
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1379
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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