Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_C01
         (871 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    25   0.77 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    24   1.4  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    24   1.4  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   2.4  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   4.1  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   9.5  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   9.5  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   9.5  

>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = +2

Query: 284 IGKQLIEKLLRSCDINKIYILIRRKKGKNVKERFSEITSEAVFNRLREKKPKFEEK 451
           I  QL +    +  I +   L  R+K +N  ++ SEI +E  ++ L    P  E K
Sbjct: 208 IQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPSEEAK 263


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 14/65 (21%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
 Frame = -1

Query: 367 LPFFSPY*YINLVYVT*SEQF--LYQLLPNESSPSGYKHVCVFVELLHVREAASDGLIDR 194
           LPF+S + Y++ +Y T S +   +++ +   +  +G+  +   + + + R      L+  
Sbjct: 82  LPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMAGYTGFLAMLTSMVMFYKRSNDLKTLLSN 141

Query: 193 LLPIQ 179
           L  IQ
Sbjct: 142 LESIQ 146


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 14/65 (21%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
 Frame = -1

Query: 367 LPFFSPY*YINLVYVT*SEQF--LYQLLPNESSPSGYKHVCVFVELLHVREAASDGLIDR 194
           LPF+S + Y++ +Y T S +   +++ +   +  +G+  +   + + + R      L+  
Sbjct: 38  LPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMAGYTGFLAMLTSMVMFYKRSNDLKTLLSN 97

Query: 193 LLPIQ 179
           L  IQ
Sbjct: 98  LESIQ 102


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 681 YAVETWTKVLSFLQSLPKLK 622
           Y   TWT++L  L+S  K+K
Sbjct: 89  YKRRTWTRLLKNLESCAKIK 108


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 91  SKLYYISKLNKFKWRFNHHG 150
           S L Y  + N F W  N HG
Sbjct: 273 SPLAYQHEYNSFNWTANGHG 292


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/24 (29%), Positives = 16/24 (66%)
 Frame = -1

Query: 613 SPAKVDRRRHLQRLIKPSRRSHVE 542
           +P K+  +  L R+ KP+++ H++
Sbjct: 488 APVKISVQEVLNRVRKPTKKLHLK 511


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 17  HYTVSNRNVAIVFFIFIL 70
           H T   RNV++ FF++++
Sbjct: 127 HETNLLRNVSVQFFVYVI 144


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 17  HYTVSNRNVAIVFFIFIL 70
           H T   RNV++ FF++++
Sbjct: 127 HETNLLRNVSVQFFVYVI 144


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,649
Number of Sequences: 336
Number of extensions: 4500
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23996456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)