Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_C01
(871 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF098505-1|AAC67415.1| 536|Caenorhabditis elegans Hypothetical ... 167 7e-42
U42835-6|AAA83589.2| 816|Caenorhabditis elegans Dehydrogenases,... 37 0.022
L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily ass... 36 0.038
U58761-4|AAB00715.1| 631|Caenorhabditis elegans Hypothetical pr... 33 0.20
L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily ass... 32 0.46
U23511-14|AAC46799.1| 357|Caenorhabditis elegans Hypothetical p... 31 1.1
AL161712-7|CAC70132.1| 235|Caenorhabditis elegans Hypothetical ... 31 1.4
U40800-3|AAA81490.1| 467|Caenorhabditis elegans Squashed vulva ... 30 1.9
AY147933-1|AAN39843.1| 467|Caenorhabditis elegans UDP-glucuroni... 30 1.9
AL132876-4|CAC48118.1| 256|Caenorhabditis elegans Hypothetical ... 30 1.9
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr... 29 3.3
U21321-5|AAL11111.1| 553|Caenorhabditis elegans Hypothetical pr... 29 3.3
U21321-4|AAG00049.1| 587|Caenorhabditis elegans Hypothetical pr... 29 3.3
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical... 29 3.3
U40939-5|AAA81703.3| 343|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical pr... 28 10.0
Z49131-3|CAA88976.1| 1211|Caenorhabditis elegans Hypothetical pr... 28 10.0
>AF098505-1|AAC67415.1| 536|Caenorhabditis elegans Hypothetical
protein Y71H10A.2 protein.
Length = 536
Score = 167 bits (407), Expect = 7e-42
Identities = 88/213 (41%), Positives = 128/213 (60%), Gaps = 1/213 (0%)
Frame = +2
Query: 230 VQKFYKNTNVFITGGTGFIGKQLIEKLLRSCD-INKIYILIRRKKGKNVKERFSEITSEA 406
V+ Y ++V +TGGTGF+GK ++EKLL + D I IY++IR +KGKN +ER S + +
Sbjct: 5 VRDVYAGSSVLLTGGTGFLGKVIVEKLLWTIDDIQNIYLMIRTRKGKNPQERLSGLLHDP 64
Query: 407 VFNRLREKKPKFEEKLVPVEGDIAELDLGLTDHDRTIICEQVNVIFHVAATTRFDEPLKV 586
+FNR+R++KP+ +KL + GD+ +LG+ D +I + VNV+ H AAT +FDE L+
Sbjct: 65 LFNRIRQEKPEAFDKLKAIGGDMMVENLGMDPEDVMLIRDNVNVVIHSAATVKFDEHLRA 124
Query: 587 ATAVNLRGTREALSLGRDCKKLKTFVHVSTAYVHATHQRVNTEVHEEFYPCTWTPEAMLA 766
A +N+ GT+ + L K LK VHVSTAY + E E+ Y P+ ++
Sbjct: 125 AVTMNVIGTKRIIDLCHQIKDLKVLVHVSTAYANCD----RFETTEKIYKSPMAPQKLVD 180
Query: 767 IAEKLXAEQLDAITPSIIKGWPNTYTFEKALAE 865
+ E L ITP I+ PNTYT KALAE
Sbjct: 181 ALSWMDDETLTKITPKILGLRPNTYTLTKALAE 213
>U42835-6|AAA83589.2| 816|Caenorhabditis elegans Dehydrogenases,
short chain protein27 protein.
Length = 816
Score = 36.7 bits (81), Expect = 0.022
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +2
Query: 239 FYKNTNVFITGGTGFIGKQLIEKLLRSCDINKIYILIRR-KKGKNVKERFSEITSEAVFN 415
+ K+T ITGGT IGK IE+L ++ + K Y++ R K N K+ E V
Sbjct: 500 YLKDTWTVITGGTDGIGKAYIEELCKTRGLKKFYLIGRNIDKLNNTKKELVEQHGCEVMC 559
Query: 416 RLREKKPKFEEKLVPVEGDIAELDLGL 496
+ + + ++ L + D+ LD+G+
Sbjct: 560 HVHDFE---KDDLSALPKDLETLDVGI 583
>L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform b protein.
Length = 837
Score = 35.9 bits (79), Expect = 0.038
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Frame = +2
Query: 173 EILNRQKPIDEAIASGLSDVQKFYKNTNVFITGGTGFIGKQLIEKLLRSCDINK-----I 337
++ N QK ++ IA LS+++ K TN +T I +L E + + + + +
Sbjct: 553 QVENLQKEVNRQIADKLSELETLRK-TNEMLTNDEECISDEL-EAIGTAVEEEQERNAQL 610
Query: 338 YILIRRKKGKNVKERFSEITSEAVFNRLREKKPKFEEKLVPVEGDIAEL 484
YI R ++ +N+K + FNRLREK E K + IA++
Sbjct: 611 YIEKREQEDRNLKMMNDRMIQNQTFNRLREKLSCLESK-AQTDAQIAKM 658
>U58761-4|AAB00715.1| 631|Caenorhabditis elegans Hypothetical
protein C01F1.3a protein.
Length = 631
Score = 33.5 bits (73), Expect = 0.20
Identities = 41/155 (26%), Positives = 66/155 (42%), Gaps = 6/155 (3%)
Frame = +2
Query: 242 YKNTNVFITGGTGFIGKQLIEKL---LRSCDINKIYILIRRKKGKNVKERFSEITSEAVF 412
Y NV ITGG GFIG + + +C+ I LI +NV +E+V
Sbjct: 3 YTPKNVVITGGCGFIGSNFVNYIHDAWPTCNFVNIDKLILNSDTQNV--------AESVR 54
Query: 413 NRLREKKPKFEEKLVPVEGDIAELDLGLTDHDRTIICEQVNVIFHVAA---TTRFDEPLK 583
N P+++ L ++ + A L++ +++ + H AA +TR
Sbjct: 55 N-----SPRYKLVLTDIKNEAAILNV--------FEQNEIDTVIHFAADCTSTRCYNETA 101
Query: 584 VATAVNLRGTREALSLGRDCKKLKTFVHVSTAYVH 688
A N+ + L R K+K FVH+ST V+
Sbjct: 102 EAVQNNVLSFIQFLETVRTYGKIKRFVHISTDEVY 136
>L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform a protein.
Length = 834
Score = 32.3 bits (70), Expect = 0.46
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Frame = +2
Query: 188 QKPIDEAIASGLSDVQKFYKNTNVFITGGTGFIGKQLIEKLLRSCDINK-----IYILIR 352
+K ++ IA LS+++ K TN +T I +L E + + + + +YI R
Sbjct: 555 EKEVNRQIADKLSELETLRK-TNEMLTNDEECISDEL-EAIGTAVEEEQERNAQLYIEKR 612
Query: 353 RKKGKNVKERFSEITSEAVFNRLREKKPKFEEKLVPVEGDIAEL 484
++ +N+K + FNRLREK E K + IA++
Sbjct: 613 EQEDRNLKMMNDRMIQNQTFNRLREKLSCLESK-AQTDAQIAKM 655
>U23511-14|AAC46799.1| 357|Caenorhabditis elegans Hypothetical
protein C32D5.12 protein.
Length = 357
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +2
Query: 257 VFITGGTGFIGKQLIEKLLRSCDINKIYILIRRKKGKN 370
V +TGG G +G+ ++++LL + I +I I+ R+ ++
Sbjct: 4 VAVTGGAGLVGRYVVQRLLENEQIAEIRIIDRQSTSRD 41
>AL161712-7|CAC70132.1| 235|Caenorhabditis elegans Hypothetical
protein Y66D12A.10 protein.
Length = 235
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +2
Query: 593 AVNLRGTREALSLGRDCKKLKTFVHVSTAYVHATHQRVN 709
A N G A G+ C VHV AY+ A HQ VN
Sbjct: 89 AANSTGHSYARIFGKCCDDRLRMVHVQDAYISAHHQLVN 127
>U40800-3|AAA81490.1| 467|Caenorhabditis elegans Squashed vulva
protein 1 protein.
Length = 467
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 257 VFITGGTGFIGKQLIEKLL 313
+ ITGG GF+G L++KL+
Sbjct: 139 ILITGGAGFVGSHLVDKLM 157
>AY147933-1|AAN39843.1| 467|Caenorhabditis elegans UDP-glucuronic
acid decarboxylase protein.
Length = 467
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 257 VFITGGTGFIGKQLIEKLL 313
+ ITGG GF+G L++KL+
Sbjct: 139 ILITGGAGFVGSHLVDKLM 157
>AL132876-4|CAC48118.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8A.4 protein.
Length = 256
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -1
Query: 298 QLLPNESSPSGYKHVCVFVELLHVREAASDGLIDRLLPIQNL 173
Q P S S +C+ + L +EA DGL+ ++ P+Q L
Sbjct: 143 QRWPRYVSKSVAMEICLSGDRLGAQEAKEDGLVSKVFPVQQL 184
>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical protein
F15D4.7 protein.
Length = 2268
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = +1
Query: 244 QKHKRVYNRRDWIHWEAIDRETAQIM*HKQDLYTNKAKKREE---CQGEIFRDYVRGCI 411
+ H+ + + E I RET +I H +LYT KA + C G + +R C+
Sbjct: 1713 EAHEPIVIHNKHVLAELIMRETHEINGHLPELYTQKAASLKYWILCAGTVAAKVIRSCV 1771
>U21321-5|AAL11111.1| 553|Caenorhabditis elegans Hypothetical
protein ZK177.8b protein.
Length = 553
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 323 DINKIYILIRRKKGKNVKERFSEITSEAVFNRLR 424
D++K+ L+R K V FSE T E +FN +R
Sbjct: 221 DVDKMDYLLRDSKASGVGITFSESTLERLFNHVR 254
>U21321-4|AAG00049.1| 587|Caenorhabditis elegans Hypothetical
protein ZK177.8a protein.
Length = 587
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 323 DINKIYILIRRKKGKNVKERFSEITSEAVFNRLR 424
D++K+ L+R K V FSE T E +FN +R
Sbjct: 255 DVDKMDYLLRDSKASGVGITFSESTLERLFNHVR 288
>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = +1
Query: 244 QKHKRVYNRRDWIHWEAIDRETAQIM*HKQDLYTNKAKKREE---CQGEIFRDYVRGCI 411
+ H+ + + E I RET +I H +LYT KA + C G + +R C+
Sbjct: 1713 EAHEPIVIHNKHVLAELIMRETHEINGHLPELYTQKAASLKYWILCAGTVAAKVIRSCV 1771
>U40939-5|AAA81703.3| 343|Caenorhabditis elegans Hypothetical
protein F13D11.4 protein.
Length = 343
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 251 TNVFITGGTGFIGKQLIEKLLRS 319
T V +TG +GFIG +E LL++
Sbjct: 6 TKVLVTGASGFIGTHCVEILLKN 28
>Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical protein
C25F9.2 protein.
Length = 1469
Score = 27.9 bits (59), Expect = 10.0
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 634 QRLQEA*NLRPCFHRVCPRYAPEGKHRGPRR 726
++ E + CFH CPR PE + P R
Sbjct: 958 EKTNEVFEVYGCFHHGCPRCFPESDQKHPLR 988
>Z49131-3|CAA88976.1| 1211|Caenorhabditis elegans Hypothetical
protein ZC373.4 protein.
Length = 1211
Score = 27.9 bits (59), Expect = 10.0
Identities = 19/70 (27%), Positives = 28/70 (40%)
Frame = +2
Query: 197 IDEAIASGLSDVQKFYKNTNVFITGGTGFIGKQLIEKLLRSCDINKIYILIRRKKGKNVK 376
+DE S L + F I F + KLL K+Y +I ++ GK
Sbjct: 13 VDEHYPSELDEPPVFDVKKIENIRANVKFDTLYQVTKLLGDGKFGKVYCVIEKETGKEFA 72
Query: 377 ERFSEITSEA 406
+F +I EA
Sbjct: 73 AKFIKIRKEA 82
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,653,249
Number of Sequences: 27780
Number of extensions: 428608
Number of successful extensions: 1325
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1322
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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