Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_B24
         (616 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    26   0.29 
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    26   0.29 
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   2.0  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   6.2  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -3

Query: 416 YWFYFCRVLIDYE*KYFSESCLFLRQLIFVAFR*LISSTY 297
           Y  Y C+ + ++E  YF    L + QL ++ F  ++ ST+
Sbjct: 195 YNIYVCQTVSNFE--YFQRKILLMIQLYYLYFDVIVISTF 232


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -3

Query: 416 YWFYFCRVLIDYE*KYFSESCLFLRQLIFVAFR*LISSTY 297
           Y  Y C+ + ++E  YF    L + QL ++ F  ++ ST+
Sbjct: 121 YNIYVCQTVSNFE--YFQRKILLMIQLYYLYFDVIVISTF 158


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 204 NVTWKNICKWNTEYSADSVEWCPVEPH 284
           N T  NIC+   +     V+W  + PH
Sbjct: 208 NTTVNNICQATHKQLFQLVQWAKLVPH 234


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 461 IAPLQVQDP*CIYSLYWFYFCRVL 390
           +APL       IY L+  +FCR L
Sbjct: 295 LAPLNSAANPIIYCLFSTHFCRTL 318


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,761
Number of Sequences: 336
Number of extensions: 3295
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)