Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_B24
         (616 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CU457740-10|CAM36340.1|  351|Caenorhabditis elegans Hypothetical...    29   3.5  
L23645-9|AAK26134.1| 1226|Caenorhabditis elegans Hypothetical pr...    28   6.1  
U97003-1|AAB52270.2|  527|Caenorhabditis elegans Udp-glucuronosy...    27   8.1  
AC024214-10|AAF36080.1|  778|Caenorhabditis elegans Calpain fami...    27   8.1  

>CU457740-10|CAM36340.1|  351|Caenorhabditis elegans Hypothetical
           protein C50E10.10 protein.
          Length = 351

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +2

Query: 26  LWSCLLFTAKSLNNLFLLLQEINLFNYDLSAFQSIVTCSL 145
           +W  +     SLNN +L+L    L +Y L+A   + TC +
Sbjct: 12  IWLPIYSLNGSLNNFYLILALFELISYFLTAILVLKTCKI 51


>L23645-9|AAK26134.1| 1226|Caenorhabditis elegans Hypothetical protein
            F54F2.1 protein.
          Length = 1226

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
 Frame = +3

Query: 432  SGILDLKWCNHKLEGHAVLAAVT-------SIGELRIYRLFNDETLNLKLWREHV 575
            S  LD+ W +   EG  +L  +T       + G  R+ +L N   LNL++  EHV
Sbjct: 851  SATLDIFWPSFSTEGGHLLYIITEPVVNPPNKGRCRVKQLQNVNPLNLRITNEHV 905


>U97003-1|AAB52270.2|  527|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein32 protein.
          Length = 527

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +2

Query: 20  GDLWSCLLFTAKSLNNLFLLLQEINLFNYDLSAFQSIVTCSLCFY 154
           G L    +FT +++     L+ E+   NYD+   + ++TC L  +
Sbjct: 112 GTLHKQAIFTCENVFKHQELIDELRSRNYDIGLAEPLMTCGLALF 156


>AC024214-10|AAF36080.1|  778|Caenorhabditis elegans Calpain family
           protein 7 protein.
          Length = 778

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 213 WKNICKWNTEYSADSVEWCPVEPHK 287
           W N  +WN  +S  S EW  V+P +
Sbjct: 548 WGNSKEWNGAWSDGSSEWSQVDPQQ 572


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,233,784
Number of Sequences: 27780
Number of extensions: 296042
Number of successful extensions: 775
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)