Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_B23
(780 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69904-5|CAA93778.1| 250|Caenorhabditis elegans Hypothetical pr... 116 1e-26
AF039046-13|AAB94213.1| 551|Caenorhabditis elegans Hypothetical... 29 3.7
Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z81587-1|CAB04701.1| 340|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z67755-5|CAA91758.2| 966|Caenorhabditis elegans Hypothetical pr... 28 6.5
AF200199-1|AAF13716.1| 966|Caenorhabditis elegans MES-1 protein. 28 6.5
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 28 8.6
AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical ... 28 8.6
>Z69904-5|CAA93778.1| 250|Caenorhabditis elegans Hypothetical
protein ZK20.5 protein.
Length = 250
Score = 116 bits (280), Expect = 1e-26
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 2/222 (0%)
Frame = +1
Query: 88 VATLYQNLKTEWAKKPRKLDKCGELLNKIKIALTQLTFLPSNNVAANQKELILA-RDVLE 264
++ ++NL WAK+P+ L ++ AL +LT + S + N K+ LA +D+ E
Sbjct: 1 MSAAHKNLLAVWAKEPKDLVA-------VEKALNELTKVLSASSDLNDKQSALASKDLYE 53
Query: 265 IGAQWAVAVKDVKAFERYMSQLKCYYFDYKDHLPESAFTNQXXXXXXXXXX-SQNRVAEF 441
I A+ D + F+ Y++Q+ YY PE++ + NR+++F
Sbjct: 54 ISVLLAILKHDFETFDDYINQMHTYY----TMAPENSENKHLMTGLHLMFLLAANRLSDF 109
Query: 442 HTELERLPVDVIRTDLYIRHPLALEQYLMEGSYNKIFLAKGNVPAESYTFFMDTLLETVR 621
H LE++P ++ YI P+ +EQ LMEG+YNK+ L + N+P+ YT F+ +L+T+R
Sbjct: 110 HMLLEQIPQKEQTSNAYISTPVRIEQSLMEGAYNKVVLTEKNIPSPFYTIFIRIMLDTIR 169
Query: 622 GEIAACIEKAYHTIPCAEAARRLNLSSQQAVLEYGKKRNWRL 747
EIA IEK++ + +A L + + + ++G++R W L
Sbjct: 170 REIATSIEKSFKVLTAKDATVMLLFDNDEQMKKFGQERKWHL 211
>AF039046-13|AAB94213.1| 551|Caenorhabditis elegans Hypothetical
protein R09B5.4 protein.
Length = 551
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = -2
Query: 206 GRNVNCVRAIFILFKSSPHLSSFLGFFAHSVFRF*YNVATSFTVAIILK*NFLIVKHSSI 27
G +V + F+S +++ LG F+++ F Y+VATS + ++++ F ++ S+
Sbjct: 318 GSSVGLPEFVIGAFRSYGSVTAILGAFSYAFFEKRYSVATSGLLGLVVQQFFAVLAVISV 377
Query: 26 NL 21
L
Sbjct: 378 FL 379
>Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 82 KDVATLYQNLKTEWAKKPRKLDKCGELLNKIKIAL 186
K+ T+ LK EW K + L C E K KI L
Sbjct: 105 KEHDTVRNALKVEWTKATKSLHDCEESYEKSKITL 139
>Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 82 KDVATLYQNLKTEWAKKPRKLDKCGELLNKIKIAL 186
K+ T+ LK EW K + L C E K KI L
Sbjct: 105 KEHDTVRNALKVEWTKATKSLHDCEESYEKSKITL 139
>Z81587-1|CAB04701.1| 340|Caenorhabditis elegans Hypothetical
protein T06G6.1 protein.
Length = 340
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = -2
Query: 314 LSKALTSFTATAHCAPISNTSLAKINSFWFAATLLLGRNV--NCVRAIFIL 168
L+ ALTS T +CA IS L W A L N+ N R I I+
Sbjct: 19 LASALTSVTLKFNCAFISTIVLISYCFSWLAIQALWNNNIFSNSTRLILIV 69
>Z67755-5|CAA91758.2| 966|Caenorhabditis elegans Hypothetical
protein F54F7.5 protein.
Length = 966
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 154 GELLNKIKIALTQLTFLPSNNVAANQKELI 243
G +LN + I +F+PSNN A + K L+
Sbjct: 107 GTVLNDVFIVCLDTSFMPSNNSAPSAKRLL 136
>AF200199-1|AAF13716.1| 966|Caenorhabditis elegans MES-1 protein.
Length = 966
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 154 GELLNKIKIALTQLTFLPSNNVAANQKELI 243
G +LN + I +F+PSNN A + K L+
Sbjct: 107 GTVLNDVFIVCLDTSFMPSNNSAPSAKRLL 136
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
K10C2.1 protein.
Length = 2314
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 357 PPPGVCIHKPTVRIESIIPAFSKP-SGRVSHRT 452
PPP V PT I +++P S P SG VS T
Sbjct: 2205 PPPSVATAGPTGPILTVVPVSSAPTSGAVSSTT 2237
>AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical
protein T20H9.6 protein.
Length = 758
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/85 (20%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +1
Query: 85 DVATLYQNLKTEWAKKP--RKLDKCGELLNKIKIALTQLTFLPSNNVAANQKELILARDV 258
D+ ++ NLKT+W K + + G+ L +K T T + +N + + E + +++
Sbjct: 334 DIWNIFDNLKTDWINKTVYGQAEHIGKALQTLK---TVQTNVQDSNESIRRGENDMLKEI 390
Query: 259 LEIGAQWAVAVKDVKAFERYMSQLK 333
++ ++ VK + E ++ ++
Sbjct: 391 TDVHSKVIRLVKYAETVEPFIGSIE 415
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,136,248
Number of Sequences: 27780
Number of extensions: 358306
Number of successful extensions: 930
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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