Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_B22
(696 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 48 6e-06
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 48 6e-06
Z77136-5|CAB00882.1| 1152|Caenorhabditis elegans Hypothetical pr... 30 1.4
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 29 4.2
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 29 4.2
AC024859-4|AAK29983.4| 472|Caenorhabditis elegans Hypothetical ... 29 4.2
AC024772-1|AAF60536.2| 242|Caenorhabditis elegans Hypothetical ... 29 4.2
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 28 5.5
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 28 5.5
U41271-4|AAA82445.3| 262|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z48045-9|CAA88099.4| 309|Caenorhabditis elegans Hypothetical pr... 27 9.7
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 48.0 bits (109), Expect = 6e-06
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Frame = +2
Query: 386 KFSAKFCNELD-KKKNVVSSPLSAEYLLALITLGTTDPAHEELLTSL--GIPDDDTIRXX 556
+F+ F N L +++V SPLS +L+L+ G + +++ +L G D+ +
Sbjct: 8 RFALNFLNTLPVHNESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHF 67
Query: 557 XXXXXXXXXXIKGVTFNVANKIYIKEGDYELDPTLKKDAVEVFDAD 694
KGV +ANK+Y+K+G + ++PT A++ + AD
Sbjct: 68 SFVSKEVKNGTKGVEVYLANKVYLKKG-FTVNPTFLSTALKNYGAD 112
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 48.0 bits (109), Expect = 6e-06
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Frame = +2
Query: 386 KFSAKFCNELD-KKKNVVSSPLSAEYLLALITLGTTDPAHEELLTSL--GIPDDDTIRXX 556
+F+ F N L +++V SPLS +L+L+ G + +++ +L G D+ +
Sbjct: 8 RFALNFLNTLPVHNESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHF 67
Query: 557 XXXXXXXXXXIKGVTFNVANKIYIKEGDYELDPTLKKDAVEVFDAD 694
KGV +ANK+Y+K+G + ++PT A++ + AD
Sbjct: 68 SFVSKEVKNGTKGVEVYLANKVYLKKG-FTVNPTFLSTALKNYGAD 112
>Z77136-5|CAB00882.1| 1152|Caenorhabditis elegans Hypothetical protein
ZC376.6 protein.
Length = 1152
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +2
Query: 293 FARVLLILFTLLEIKNPVLSMD--SKALSSAITKFSAKFCNELDKKK 427
F R L ++ I+N + +M+ KA++SAI + +C ELD+K+
Sbjct: 883 FVRALNFFSKMVRIENRLKTMEIQHKAMASAIAHKNTLYCLELDRKE 929
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/48 (39%), Positives = 22/48 (45%)
Frame = +2
Query: 383 TKFSAKFCNELDKKKNVVSSPLSAEYLLALITLGTTDPAHEELLTSLG 526
T F+ K L +VV SPLS LALI G +EL LG
Sbjct: 9 TDFALKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLG 56
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/48 (39%), Positives = 22/48 (45%)
Frame = +2
Query: 383 TKFSAKFCNELDKKKNVVSSPLSAEYLLALITLGTTDPAHEELLTSLG 526
T F+ K L +VV SPLS LALI G +EL LG
Sbjct: 9 TDFALKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLG 56
>AC024859-4|AAK29983.4| 472|Caenorhabditis elegans Hypothetical
protein Y71H2AM.11 protein.
Length = 472
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +1
Query: 283 IDDICQSFVNTIYTIGNKEPCSQYGFKGFILCNHQVLC 396
I D+ S ++ Y +G +PC YG +G ++ C
Sbjct: 184 ISDVTFSCISDNYWLGRNKPCLTYGLRGICYYFVEISC 221
>AC024772-1|AAF60536.2| 242|Caenorhabditis elegans Hypothetical
protein Y40C5A.1 protein.
Length = 242
Score = 28.7 bits (61), Expect = 4.2
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 223 IKFYHHRYHRSRSTYLSQ 170
+ FYH+ YHRS+ YL++
Sbjct: 31 VSFYHNNYHRSKILYLNK 48
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 28.3 bits (60), Expect = 5.5
Identities = 24/75 (32%), Positives = 34/75 (45%)
Frame = -1
Query: 612 ATLNVTPFIDFNFDDTAENDERIVSSSGIPRLVNSSSCAGSVVPKVINASKYSADNGDDT 433
A TP I T E+ + SSS I ++SSS GS V + ++D+ D T
Sbjct: 386 AVSTTTPMISL----TTESMQSTTSSSEISTTLDSSSTTGS----VSSTESVTSDSSDST 437
Query: 432 TFFFLSSSLQNFAEN 388
T +SSS E+
Sbjct: 438 TPLDVSSSPSESTES 452
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 28.3 bits (60), Expect = 5.5
Identities = 24/75 (32%), Positives = 34/75 (45%)
Frame = -1
Query: 612 ATLNVTPFIDFNFDDTAENDERIVSSSGIPRLVNSSSCAGSVVPKVINASKYSADNGDDT 433
A TP I T E+ + SSS I ++SSS GS V + ++D+ D T
Sbjct: 386 AVSTTTPMISL----TTESMQSTTSSSEISTTLDSSSTTGS----VSSTESVTSDSSDST 437
Query: 432 TFFFLSSSLQNFAEN 388
T +SSS E+
Sbjct: 438 TPLDVSSSPSESTES 452
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 28.3 bits (60), Expect = 5.5
Identities = 24/75 (32%), Positives = 34/75 (45%)
Frame = -1
Query: 612 ATLNVTPFIDFNFDDTAENDERIVSSSGIPRLVNSSSCAGSVVPKVINASKYSADNGDDT 433
A TP I T E+ + SSS I ++SSS GS V + ++D+ D T
Sbjct: 386 AVSTTTPMISL----TTESMQSTTSSSEISTTLDSSSTTGS----VSSTESVTSDSSDST 437
Query: 432 TFFFLSSSLQNFAEN 388
T +SSS E+
Sbjct: 438 TPLDVSSSPSESTES 452
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 28.3 bits (60), Expect = 5.5
Identities = 24/75 (32%), Positives = 34/75 (45%)
Frame = -1
Query: 612 ATLNVTPFIDFNFDDTAENDERIVSSSGIPRLVNSSSCAGSVVPKVINASKYSADNGDDT 433
A TP I T E+ + SSS I ++SSS GS V + ++D+ D T
Sbjct: 386 AVSTTTPMISL----TTESMQSTTSSSEISTTLDSSSTTGS----VSSTESVTSDSSDST 437
Query: 432 TFFFLSSSLQNFAEN 388
T +SSS E+
Sbjct: 438 TPLDVSSSPSESTES 452
>U41271-4|AAA82445.3| 262|Caenorhabditis elegans Hypothetical
protein C46H3.3 protein.
Length = 262
Score = 27.9 bits (59), Expect = 7.3
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = -3
Query: 259 MIHQLFSLQLRKIKF-YHHRYHRSRSTYL---SQQIIILSMIV 143
M+ +LFS LRKI F Y H + + +L S Q+ ILSM++
Sbjct: 145 MLERLFSCGLRKINFQYMDHLHTASAFHLAAGSGQVQILSMLL 187
>Z48045-9|CAA88099.4| 309|Caenorhabditis elegans Hypothetical
protein C41C4.2 protein.
Length = 309
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 260 NRLKD*LLSMIFARVLLILFTLLEIKNPVLSM 355
NR++ LLSMIF ++L++F L E + +M
Sbjct: 14 NRIQ--LLSMIFCEIILLIFELFEFAAIIFNM 43
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,918,378
Number of Sequences: 27780
Number of extensions: 298889
Number of successful extensions: 713
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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