Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_B22
         (696 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   4.8  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   4.8  
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    22   6.4  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    22   6.4  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   6.4  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   6.4  
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    22   6.4  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 14/60 (23%), Positives = 30/60 (50%)
 Frame = -1

Query: 471 NASKYSADNGDDTTFFFLSSSLQNFAENLVIAEDKAFESILRTGFFISNSVNSINKTLAN 292
           N   +S +  D+ + +    ++ NF+    I + KAF ++ +      N+ NS  K+++N
Sbjct: 488 NVFAFSRETEDNGSLY----AILNFSNEEQIVDLKAFNNVPKKLNMFYNNFNSDIKSISN 543


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 14/60 (23%), Positives = 30/60 (50%)
 Frame = -1

Query: 471 NASKYSADNGDDTTFFFLSSSLQNFAENLVIAEDKAFESILRTGFFISNSVNSINKTLAN 292
           N   +S +  D+ + +    ++ NF+    I + KAF ++ +      N+ NS  K+++N
Sbjct: 488 NVFAFSRETEDNGSLY----AILNFSNEEQIVDLKAFNNVPKKLNMFYNNFNSDIKSISN 543


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -3

Query: 688 IEYLDSVLLKCWVELIVTLLDVYFVGYIKR 599
           ++ +D  L  C+V +  +LL+   VGY+ +
Sbjct: 280 VKSIDVYLGTCFVMVFASLLEYATVGYMAK 309


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -3

Query: 688 IEYLDSVLLKCWVELIVTLLDVYFVGYIKR 599
           ++ +D  L  C+V +  +LL+   VGY+ +
Sbjct: 280 VKSIDVYLGTCFVMVFASLLEYATVGYMAK 309


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +3

Query: 45  LFNKGIFTINCKKRCYIEKTIFKSPVLWVF 134
           LF+  +FT N      + K ++  P+L +F
Sbjct: 204 LFDATVFTYNITNSTPLLKKLYGGPLLRIF 233


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +3

Query: 45  LFNKGIFTINCKKRCYIEKTIFKSPVLWVF 134
           LF+  +FT N      + K ++  P+L +F
Sbjct: 219 LFDATVFTYNITNSTPLLKKLYGGPLLRIF 248


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -3

Query: 688 IEYLDSVLLKCWVELIVTLLDVYFVGYIKR 599
           ++ +D  L  C+V +  +LL+   VGY+ +
Sbjct: 219 VKSIDVYLGTCFVMVFASLLEYATVGYMAK 248


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,842
Number of Sequences: 438
Number of extensions: 3725
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)