Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_B21
(784 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK222808-1|BAD96528.1| 338|Homo sapiens transitional epithelia ... 208 2e-53
BT006832-1|AAP35478.1| 338|Homo sapiens transitional epithelia ... 207 3e-53
BC004468-1|AAH04468.1| 338|Homo sapiens UbiA prenyltransferase ... 207 3e-53
AL031291-1|CAI22837.1| 338|Homo sapiens transitional epithelia ... 207 3e-53
AF117064-1|AAD27581.1| 338|Homo sapiens transitional epithelia ... 207 3e-53
AL031291-2|CAI22838.1| 179|Homo sapiens transitional epithelia ... 154 4e-37
X54162-1|CAA38101.1| 572|Homo sapiens 64 Kd autoantigen protein. 30 8.2
BC080187-1|AAH80187.1| 600|Homo sapiens leiomodin 1 (smooth mus... 30 8.2
AL513217-2|CAH72278.1| 631|Homo sapiens leiomodin 1 (smooth mus... 30 8.2
>AK222808-1|BAD96528.1| 338|Homo sapiens transitional epithelia
response protein variant protein.
Length = 338
Score = 208 bits (507), Expect = 2e-53
Identities = 105/195 (53%), Positives = 130/195 (66%)
Frame = +2
Query: 200 PKEDTIAPRNPFMKVRTYVLALRPWSLSASLLPTLLGAALSYRLPGDNGFSWWXXXXXXX 379
P++D + R+ K +YVLALRPWS SASL P LG+AL+YR G
Sbjct: 32 PEQDRLPQRSWRQKCASYVLALRPWSFSASLTPVALGSALAYRSHGV--LDPRLLVGCAV 89
Query: 380 XXXPVHGAGNVVNTYFDFVKGIDNRKSDDRTLVDHILSIDEVVSLGAILYLAGCAFFVPL 559
VHGAGN+VNTY+DF KGID++KSDDRTLVD IL +VV G LY GC L
Sbjct: 90 AVLAVHGAGNLVNTYYDFSKGIDHKKSDDRTLVDRILEPQDVVRFGVFLYTLGCVCAACL 149
Query: 560 VISSPARMEHLALVYFGGLSSSFLYTGGIGLKYIALGDILVLVTFGPVSVVFAXLAXTGR 739
SP ++EHLALVYFGGLS SFLYTGGIG KY+ALGD+++L+TFGP++V+FA G
Sbjct: 150 YYLSPLKLEHLALVYFGGLSGSFLYTGGIGFKYVALGDLIILITFGPLAVMFAYAIQVGS 209
Query: 740 VDWPIMAYAIPLALN 784
+ + YAIPLAL+
Sbjct: 210 LAIFPLVYAIPLALS 224
>BT006832-1|AAP35478.1| 338|Homo sapiens transitional epithelia
response protein protein.
Length = 338
Score = 207 bits (506), Expect = 3e-53
Identities = 104/195 (53%), Positives = 130/195 (66%)
Frame = +2
Query: 200 PKEDTIAPRNPFMKVRTYVLALRPWSLSASLLPTLLGAALSYRLPGDNGFSWWXXXXXXX 379
P++D + R+ K +YVLALRPWS SASL P LG+AL+YR G
Sbjct: 32 PEQDRLPQRSWRQKCASYVLALRPWSFSASLTPVALGSALAYRSHGV--LDPRLLVGCAV 89
Query: 380 XXXPVHGAGNVVNTYFDFVKGIDNRKSDDRTLVDHILSIDEVVSLGAILYLAGCAFFVPL 559
VHGAGN+VNTY+DF KGID++KSDDRTLVD IL +VV G LY GC L
Sbjct: 90 AVLAVHGAGNLVNTYYDFSKGIDHKKSDDRTLVDRILEPQDVVRFGVFLYTLGCVCAACL 149
Query: 560 VISSPARMEHLALVYFGGLSSSFLYTGGIGLKYIALGDILVLVTFGPVSVVFAXLAXTGR 739
SP ++EHLAL+YFGGLS SFLYTGGIG KY+ALGD+++L+TFGP++V+FA G
Sbjct: 150 YYLSPLKLEHLALIYFGGLSGSFLYTGGIGFKYVALGDLIILITFGPLAVMFAYAIQVGS 209
Query: 740 VDWPIMAYAIPLALN 784
+ + YAIPLAL+
Sbjct: 210 LAIFPLVYAIPLALS 224
>BC004468-1|AAH04468.1| 338|Homo sapiens UbiA prenyltransferase
domain containing 1 protein.
Length = 338
Score = 207 bits (506), Expect = 3e-53
Identities = 104/195 (53%), Positives = 130/195 (66%)
Frame = +2
Query: 200 PKEDTIAPRNPFMKVRTYVLALRPWSLSASLLPTLLGAALSYRLPGDNGFSWWXXXXXXX 379
P++D + R+ K +YVLALRPWS SASL P LG+AL+YR G
Sbjct: 32 PEQDRLPQRSWRQKCASYVLALRPWSFSASLTPVALGSALAYRSHGV--LDPRLLVGCAV 89
Query: 380 XXXPVHGAGNVVNTYFDFVKGIDNRKSDDRTLVDHILSIDEVVSLGAILYLAGCAFFVPL 559
VHGAGN+VNTY+DF KGID++KSDDRTLVD IL +VV G LY GC L
Sbjct: 90 AVLAVHGAGNLVNTYYDFSKGIDHKKSDDRTLVDRILEPQDVVRFGVFLYTLGCVCAACL 149
Query: 560 VISSPARMEHLALVYFGGLSSSFLYTGGIGLKYIALGDILVLVTFGPVSVVFAXLAXTGR 739
SP ++EHLAL+YFGGLS SFLYTGGIG KY+ALGD+++L+TFGP++V+FA G
Sbjct: 150 YYLSPLKLEHLALIYFGGLSGSFLYTGGIGFKYVALGDLIILITFGPLAVMFAYAIQVGS 209
Query: 740 VDWPIMAYAIPLALN 784
+ + YAIPLAL+
Sbjct: 210 LAIFPLVYAIPLALS 224
>AL031291-1|CAI22837.1| 338|Homo sapiens transitional epithelia
response protein (TERE1) protein.
Length = 338
Score = 207 bits (506), Expect = 3e-53
Identities = 104/195 (53%), Positives = 130/195 (66%)
Frame = +2
Query: 200 PKEDTIAPRNPFMKVRTYVLALRPWSLSASLLPTLLGAALSYRLPGDNGFSWWXXXXXXX 379
P++D + R+ K +YVLALRPWS SASL P LG+AL+YR G
Sbjct: 32 PEQDRLPQRSWRQKCASYVLALRPWSFSASLTPVALGSALAYRSHGV--LDPRLLVGCAV 89
Query: 380 XXXPVHGAGNVVNTYFDFVKGIDNRKSDDRTLVDHILSIDEVVSLGAILYLAGCAFFVPL 559
VHGAGN+VNTY+DF KGID++KSDDRTLVD IL +VV G LY GC L
Sbjct: 90 AVLAVHGAGNLVNTYYDFSKGIDHKKSDDRTLVDRILEPQDVVRFGVFLYTLGCVCAACL 149
Query: 560 VISSPARMEHLALVYFGGLSSSFLYTGGIGLKYIALGDILVLVTFGPVSVVFAXLAXTGR 739
SP ++EHLAL+YFGGLS SFLYTGGIG KY+ALGD+++L+TFGP++V+FA G
Sbjct: 150 YYLSPLKLEHLALIYFGGLSGSFLYTGGIGFKYVALGDLIILITFGPLAVMFAYAIQVGS 209
Query: 740 VDWPIMAYAIPLALN 784
+ + YAIPLAL+
Sbjct: 210 LAIFPLVYAIPLALS 224
>AF117064-1|AAD27581.1| 338|Homo sapiens transitional epithelia
response protein protein.
Length = 338
Score = 207 bits (506), Expect = 3e-53
Identities = 104/195 (53%), Positives = 130/195 (66%)
Frame = +2
Query: 200 PKEDTIAPRNPFMKVRTYVLALRPWSLSASLLPTLLGAALSYRLPGDNGFSWWXXXXXXX 379
P++D + R+ K +YVLALRPWS SASL P LG+AL+YR G
Sbjct: 32 PEQDRLPQRSWRQKCASYVLALRPWSFSASLTPVALGSALAYRSHGV--LDPRLLVGCAV 89
Query: 380 XXXPVHGAGNVVNTYFDFVKGIDNRKSDDRTLVDHILSIDEVVSLGAILYLAGCAFFVPL 559
VHGAGN+VNTY+DF KGID++KSDDRTLVD IL +VV G LY GC L
Sbjct: 90 AVLAVHGAGNLVNTYYDFSKGIDHKKSDDRTLVDRILEPQDVVRFGVFLYTLGCVCAACL 149
Query: 560 VISSPARMEHLALVYFGGLSSSFLYTGGIGLKYIALGDILVLVTFGPVSVVFAXLAXTGR 739
SP ++EHLAL+YFGGLS SFLYTGGIG KY+ALGD+++L+TFGP++V+FA G
Sbjct: 150 YYLSPLKLEHLALIYFGGLSGSFLYTGGIGFKYVALGDLIILITFGPLAVMFAYAIQVGS 209
Query: 740 VDWPIMAYAIPLALN 784
+ + YAIPLAL+
Sbjct: 210 LAIFPLVYAIPLALS 224
>AL031291-2|CAI22838.1| 179|Homo sapiens transitional epithelia
response protein (TERE1) protein.
Length = 179
Score = 154 bits (373), Expect = 4e-37
Identities = 79/147 (53%), Positives = 94/147 (63%)
Frame = +2
Query: 200 PKEDTIAPRNPFMKVRTYVLALRPWSLSASLLPTLLGAALSYRLPGDNGFSWWXXXXXXX 379
P++D + R+ K +YVLALRPWS SASL P LG+AL+YR G
Sbjct: 32 PEQDRLPQRSWRQKCASYVLALRPWSFSASLTPVALGSALAYRSHGV--LDPRLLVGCAV 89
Query: 380 XXXPVHGAGNVVNTYFDFVKGIDNRKSDDRTLVDHILSIDEVVSLGAILYLAGCAFFVPL 559
VHGAGN+VNTY+DF KGID++KSDDRTLVD IL +VV G LY GC L
Sbjct: 90 AVLAVHGAGNLVNTYYDFSKGIDHKKSDDRTLVDRILEPQDVVRFGVFLYTLGCVCAACL 149
Query: 560 VISSPARMEHLALVYFGGLSSSFLYTG 640
SP ++EHLAL+YFGGLS SFLYTG
Sbjct: 150 YYLSPLKLEHLALIYFGGLSGSFLYTG 176
>X54162-1|CAA38101.1| 572|Homo sapiens 64 Kd autoantigen protein.
Length = 572
Score = 30.3 bits (65), Expect = 8.2
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = +2
Query: 134 KKMEQKRKEEDIPGEEGNLLEQPKEDTIAPRNP 232
K+++++R+ ++ GE+ +LLE PK +A +P
Sbjct: 449 KRLQEQRQAQEAKGEKKDLLEVPKAGAVAKGSP 481
>BC080187-1|AAH80187.1| 600|Homo sapiens leiomodin 1 (smooth
muscle) protein.
Length = 600
Score = 30.3 bits (65), Expect = 8.2
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = +2
Query: 134 KKMEQKRKEEDIPGEEGNLLEQPKEDTIAPRNP 232
K+++++R+ ++ GE+ +LLE PK +A +P
Sbjct: 477 KRLQEQRQAQEAKGEKKDLLEVPKAGAVAKGSP 509
>AL513217-2|CAH72278.1| 631|Homo sapiens leiomodin 1 (smooth
muscle) protein.
Length = 631
Score = 30.3 bits (65), Expect = 8.2
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = +2
Query: 134 KKMEQKRKEEDIPGEEGNLLEQPKEDTIAPRNP 232
K+++++R+ ++ GE+ +LLE PK +A +P
Sbjct: 477 KRLQEQRQAQEAKGEKKDLLEVPKAGAVAKGSP 509
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,409,169
Number of Sequences: 237096
Number of extensions: 2556064
Number of successful extensions: 5400
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5389
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9534535578
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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