Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_B21
         (784 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061093-1|AAL28641.1|  359|Drosophila melanogaster LD08295p pro...   267   1e-71
AF440356-1|AAL34085.1|  359|Drosophila melanogaster HEIX protein.     267   1e-71
AE014134-2690|AAF53515.1|  359|Drosophila melanogaster CG5876-PA...   267   1e-71
Y08821-1|CAA70056.1|  479|Drosophila melanogaster ladybird early...    36   0.082
AE014297-3010|AAF55896.1|  479|Drosophila melanogaster CG6545-PA...    36   0.082
AL132792-1|CAB65848.1| 2224|Drosophila melanogaster EG:BACR19J1....    30   4.1  
AE014298-97|AAN09029.4| 2224|Drosophila melanogaster CG5227-PD, ...    30   4.1  
AE014298-96|AAF45541.5| 2224|Drosophila melanogaster CG5227-PB, ...    30   4.1  
AE014298-95|AAN09027.4| 2224|Drosophila melanogaster CG5227-PA, ...    30   4.1  
AE014298-94|AAN09028.5| 2232|Drosophila melanogaster CG5227-PC, ...    30   4.1  
U88578-1|AAD09632.1| 2222|Drosophila melanogaster sdk protein.         29   5.4  

>AY061093-1|AAL28641.1|  359|Drosophila melanogaster LD08295p
           protein.
          Length = 359

 Score =  267 bits (654), Expect = 1e-71
 Identities = 126/184 (68%), Positives = 149/184 (80%)
 Frame = +2

Query: 233 FMKVRTYVLALRPWSLSASLLPTLLGAALSYRLPGDNGFSWWXXXXXXXXXXPVHGAGNV 412
           FMK++TY+LALRPWSLSASL+PTLLG+AL+YR      FS             VH AGNV
Sbjct: 58  FMKLKTYLLALRPWSLSASLVPTLLGSALAYRSQWAEEFSLATFFLTAFTVVTVHCAGNV 117

Query: 413 VNTYFDFVKGIDNRKSDDRTLVDHILSIDEVVSLGAILYLAGCAFFVPLVISSPARMEHL 592
           VNTYFDF+KGID +K+DDRTLVDHIL+ DEVVSLGAILY+AGC  FV L + SPA+MEHL
Sbjct: 118 VNTYFDFIKGIDKQKADDRTLVDHILTKDEVVSLGAILYMAGCGGFVLLAVLSPAKMEHL 177

Query: 593 ALVYFGGLSSSFLYTGGIGLKYIALGDILVLVTFGPVSVVFAXLAXTGRVDWPIMAYAIP 772
           AL+YFGGLSSSFLYTGGIG KYIALGD+++L+ FGP+SV+FA ++ TG +DW  M YAIP
Sbjct: 178 ALIYFGGLSSSFLYTGGIGFKYIALGDLVILILFGPISVLFAFMSQTGHLDWTTMGYAIP 237

Query: 773 LALN 784
           LALN
Sbjct: 238 LALN 241


>AF440356-1|AAL34085.1|  359|Drosophila melanogaster HEIX protein.
          Length = 359

 Score =  267 bits (654), Expect = 1e-71
 Identities = 126/184 (68%), Positives = 149/184 (80%)
 Frame = +2

Query: 233 FMKVRTYVLALRPWSLSASLLPTLLGAALSYRLPGDNGFSWWXXXXXXXXXXPVHGAGNV 412
           FMK++TY+LALRPWSLSASL+PTLLG+AL+YR      FS             VH AGNV
Sbjct: 58  FMKLKTYLLALRPWSLSASLVPTLLGSALAYRSQWAEEFSLATFFLTAFTVVTVHCAGNV 117

Query: 413 VNTYFDFVKGIDNRKSDDRTLVDHILSIDEVVSLGAILYLAGCAFFVPLVISSPARMEHL 592
           VNTYFDF+KGID +K+DDRTLVDHIL+ DEVVSLGAILY+AGC  FV L + SPA+MEHL
Sbjct: 118 VNTYFDFIKGIDKQKADDRTLVDHILTKDEVVSLGAILYMAGCGGFVLLAVLSPAKMEHL 177

Query: 593 ALVYFGGLSSSFLYTGGIGLKYIALGDILVLVTFGPVSVVFAXLAXTGRVDWPIMAYAIP 772
           AL+YFGGLSSSFLYTGGIG KYIALGD+++L+ FGP+SV+FA ++ TG +DW  M YAIP
Sbjct: 178 ALIYFGGLSSSFLYTGGIGFKYIALGDLVILILFGPISVLFAFMSQTGHLDWTTMGYAIP 237

Query: 773 LALN 784
           LALN
Sbjct: 238 LALN 241


>AE014134-2690|AAF53515.1|  359|Drosophila melanogaster CG5876-PA
           protein.
          Length = 359

 Score =  267 bits (654), Expect = 1e-71
 Identities = 126/184 (68%), Positives = 149/184 (80%)
 Frame = +2

Query: 233 FMKVRTYVLALRPWSLSASLLPTLLGAALSYRLPGDNGFSWWXXXXXXXXXXPVHGAGNV 412
           FMK++TY+LALRPWSLSASL+PTLLG+AL+YR      FS             VH AGNV
Sbjct: 58  FMKLKTYLLALRPWSLSASLVPTLLGSALAYRSQWAEEFSLATFFLTAFTVVTVHCAGNV 117

Query: 413 VNTYFDFVKGIDNRKSDDRTLVDHILSIDEVVSLGAILYLAGCAFFVPLVISSPARMEHL 592
           VNTYFDF+KGID +K+DDRTLVDHIL+ DEVVSLGAILY+AGC  FV L + SPA+MEHL
Sbjct: 118 VNTYFDFIKGIDKQKADDRTLVDHILTKDEVVSLGAILYMAGCGGFVLLAVLSPAKMEHL 177

Query: 593 ALVYFGGLSSSFLYTGGIGLKYIALGDILVLVTFGPVSVVFAXLAXTGRVDWPIMAYAIP 772
           AL+YFGGLSSSFLYTGGIG KYIALGD+++L+ FGP+SV+FA ++ TG +DW  M YAIP
Sbjct: 178 ALIYFGGLSSSFLYTGGIGFKYIALGDLVILILFGPISVLFAFMSQTGHLDWTTMGYAIP 237

Query: 773 LALN 784
           LALN
Sbjct: 238 LALN 241


>Y08821-1|CAA70056.1|  479|Drosophila melanogaster ladybird early
           homeodomain transcriptionfactor protein.
          Length = 479

 Score = 35.5 bits (78), Expect = 0.082
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = +2

Query: 143 EQKRKEEDIPGEEGNLLEQPKEDTIAPRNPFMKVRTYVLALRPWSLSASLLPT 301
           E++R+E   P    NLL  P    IAP    ++ RT  L + P + +A LLP+
Sbjct: 144 EKQREESVSPPPNANLLAPPASRPIAPSGGLLQPRTEPLDVHPAAAAAMLLPS 196


>AE014297-3010|AAF55896.1|  479|Drosophila melanogaster CG6545-PA
           protein.
          Length = 479

 Score = 35.5 bits (78), Expect = 0.082
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = +2

Query: 143 EQKRKEEDIPGEEGNLLEQPKEDTIAPRNPFMKVRTYVLALRPWSLSASLLPT 301
           E++R+E   P    NLL  P    IAP    ++ RT  L + P + +A LLP+
Sbjct: 144 EKQREESVSPPPNANLLAPPASRPIAPSGGLLQPRTEPLDVHPAAAAAMLLPS 196


>AL132792-1|CAB65848.1| 2224|Drosophila melanogaster
           EG:BACR19J1.1,FBgn0021764;sdk protein.
          Length = 2224

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
 Frame = +2

Query: 131 FKKMEQKRKEEDIPGEEGNLLEQPKEDTIAPRNPFM-KVRTYVLALRPWS--LSASLLPT 301
           F+     R  E  P E  N++E P+E    P   F+   R+    +  W   L       
Sbjct: 728 FRVSAVNRVGEGSPSEPSNVVELPQEAPSGPPVGFVGSARSMSEIITQWQPPLEEHRNGQ 787

Query: 302 LLGAALSYRLPGDNGFSW 355
           +LG  L YRL G N   W
Sbjct: 788 ILGYILRYRLFGYNNVPW 805


>AE014298-97|AAN09029.4| 2224|Drosophila melanogaster CG5227-PD,
           isoform D protein.
          Length = 2224

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
 Frame = +2

Query: 131 FKKMEQKRKEEDIPGEEGNLLEQPKEDTIAPRNPFM-KVRTYVLALRPWS--LSASLLPT 301
           F+     R  E  P E  N++E P+E    P   F+   R+    +  W   L       
Sbjct: 728 FRVSAVNRVGEGSPSEPSNVVELPQEAPSGPPVGFVGSARSMSEIITQWQPPLEEHRNGQ 787

Query: 302 LLGAALSYRLPGDNGFSW 355
           +LG  L YRL G N   W
Sbjct: 788 ILGYILRYRLFGYNNVPW 805


>AE014298-96|AAF45541.5| 2224|Drosophila melanogaster CG5227-PB,
           isoform B protein.
          Length = 2224

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
 Frame = +2

Query: 131 FKKMEQKRKEEDIPGEEGNLLEQPKEDTIAPRNPFM-KVRTYVLALRPWS--LSASLLPT 301
           F+     R  E  P E  N++E P+E    P   F+   R+    +  W   L       
Sbjct: 728 FRVSAVNRVGEGSPSEPSNVVELPQEAPSGPPVGFVGSARSMSEIITQWQPPLEEHRNGQ 787

Query: 302 LLGAALSYRLPGDNGFSW 355
           +LG  L YRL G N   W
Sbjct: 788 ILGYILRYRLFGYNNVPW 805


>AE014298-95|AAN09027.4| 2224|Drosophila melanogaster CG5227-PA,
           isoform A protein.
          Length = 2224

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
 Frame = +2

Query: 131 FKKMEQKRKEEDIPGEEGNLLEQPKEDTIAPRNPFM-KVRTYVLALRPWS--LSASLLPT 301
           F+     R  E  P E  N++E P+E    P   F+   R+    +  W   L       
Sbjct: 728 FRVSAVNRVGEGSPSEPSNVVELPQEAPSGPPVGFVGSARSMSEIITQWQPPLEEHRNGQ 787

Query: 302 LLGAALSYRLPGDNGFSW 355
           +LG  L YRL G N   W
Sbjct: 788 ILGYILRYRLFGYNNVPW 805


>AE014298-94|AAN09028.5| 2232|Drosophila melanogaster CG5227-PC,
           isoform C protein.
          Length = 2232

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
 Frame = +2

Query: 131 FKKMEQKRKEEDIPGEEGNLLEQPKEDTIAPRNPFM-KVRTYVLALRPWS--LSASLLPT 301
           F+     R  E  P E  N++E P+E    P   F+   R+    +  W   L       
Sbjct: 728 FRVSAVNRVGEGSPSEPSNVVELPQEAPSGPPVGFVGSARSMSEIITQWQPPLEEHRNGQ 787

Query: 302 LLGAALSYRLPGDNGFSW 355
           +LG  L YRL G N   W
Sbjct: 788 ILGYILRYRLFGYNNVPW 805


>U88578-1|AAD09632.1| 2222|Drosophila melanogaster sdk protein.
          Length = 2222

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
 Frame = +2

Query: 131 FKKMEQKRKEEDIPGEEGNLLEQPKEDTIAPRNPFM-KVRTYVLALRPWS--LSASLLPT 301
           F+     R  E  P E  N++E P+E    P   F+   R+    +  W   L       
Sbjct: 728 FRVSAVNRVGEGSPSEPSNVVELPQEAHSGPPVGFVGSARSMSEIITQWQPPLEEHRNGQ 787

Query: 302 LLGAALSYRLPGDNGFSW 355
           +LG  L YRL G N   W
Sbjct: 788 ILGYILRYRLFGYNNVPW 805


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,212,587
Number of Sequences: 53049
Number of extensions: 732128
Number of successful extensions: 2289
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2278
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3613676352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)