Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_B17
         (834 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   3.0  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   3.9  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   9.1  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   9.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.1  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +1

Query: 253 TYSGRAKHFLQLTNPLNVLASDAELDEAQRIVAEFRKTRRM 375
           T+ GRAK    L    N+     +LD+    V   R+ RRM
Sbjct: 96  TFIGRAKFLAILKQMRNLEPEFLKLDQLGATVRNNRQIRRM 136


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 102 SGNETNLIEIHSECVRIFGTIFFHSIIN 185
           SG+ET L ++ S C  +   I+  ++IN
Sbjct: 90  SGDETALADMISRCNAVGVRIYVDTVIN 117


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 488 ACAAMRPSTNIFSPVSGWK 432
           A   +RPST+  + V GW+
Sbjct: 50  AILQVRPSTSAAADVDGWQ 68


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -2

Query: 470 PSTNIFSPVSGWKALSYKY 414
           P   I   + GW   SYKY
Sbjct: 91  PDLKIILSMGGWNEGSYKY 109


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 10/42 (23%), Positives = 19/42 (45%)
 Frame = +1

Query: 457 MFVLGRMAAQAPMNTIITGCMITFYKTTPATVFWQWVNQTFN 582
           +FVL  +  +   + +I    +  + +T A V   W+N   N
Sbjct: 420 IFVLCELLIEGTTSILINVPSLIIHVSTSAYVATVWINSVIN 461


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,571
Number of Sequences: 336
Number of extensions: 4502
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22932949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)