Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_B17
(834 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66565-1|CAA91477.1| 324|Caenorhabditis elegans Hypothetical pr... 219 2e-57
Z69902-2|CAA93764.1| 326|Caenorhabditis elegans Hypothetical pr... 208 5e-54
Z81534-3|CAB04347.3| 328|Caenorhabditis elegans Hypothetical pr... 204 6e-53
Z48009-1|CAA88076.1| 329|Caenorhabditis elegans Hypothetical pr... 201 4e-52
AL021175-7|CAE54921.1| 329|Caenorhabditis elegans Hypothetical ... 188 3e-48
AL021175-8|CAA15970.2| 201|Caenorhabditis elegans Hypothetical ... 178 5e-45
U29082-7|AAA68404.3| 319|Caenorhabditis elegans Hypothetical pr... 166 2e-41
Z48045-8|CAI46557.1| 331|Caenorhabditis elegans Hypothetical pr... 106 2e-23
AL713992-1|CAL69742.1| 74|Caenorhabditis elegans Hypothetical ... 41 0.001
AL110477-19|CAJ43447.1| 327|Caenorhabditis elegans Hypothetical... 30 2.3
AL110477-18|CAB54327.1| 312|Caenorhabditis elegans Hypothetical... 30 2.3
U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein. 29 3.1
U21731-1|AAA85852.1| 985|Caenorhabditis elegans UNC-44 protein. 29 3.1
Z69661-5|CAA93495.2| 346|Caenorhabditis elegans Hypothetical pr... 29 5.4
U23516-4|AAG38880.1| 210|Caenorhabditis elegans Hypothetical pr... 29 5.4
AL132876-3|CAD21657.2| 746|Caenorhabditis elegans Hypothetical ... 29 5.4
U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical pr... 28 7.2
AL021571-3|CAC70102.2| 344|Caenorhabditis elegans Hypothetical ... 28 7.2
Z74031-6|CAB54239.1| 227|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z74031-5|CAA98457.1| 225|Caenorhabditis elegans Hypothetical pr... 28 9.5
U29244-16|AAQ23126.1| 172|Caenorhabditis elegans Hypothetical p... 28 9.5
AC025716-1|AAK39606.1| 788|Caenorhabditis elegans Hypothetical ... 28 9.5
>Z66565-1|CAA91477.1| 324|Caenorhabditis elegans Hypothetical
protein T04F8.1 protein.
Length = 324
Score = 219 bits (535), Expect = 2e-57
Identities = 105/204 (51%), Positives = 134/204 (65%)
Frame = +1
Query: 223 DLDKPRYDQSTYSGRAKHFLQLTNPLNVLASDAELDEAQRIVAEFRKTRRMPPGYDEEKL 402
D+ KP++DQST+ GRAKHF +TNPLN+ + +LDE ++IV ++RK + +L
Sbjct: 13 DISKPKWDQSTFEGRAKHFFAITNPLNLFHGEKQLDEFKKIVEDYRKGS-VSNDLTLNQL 71
Query: 403 WSTKYLYDSAFHPDTGEKMFVLGRMAAQAPMNTIITGCMITFYKTTPATVFWQWVNQTFN 582
W K++ DSAFHP TGEKM ++GRM+AQ PMN ITG M+TFYK+ A +FWQW+NQ+FN
Sbjct: 72 WKAKHVVDSAFHPSTGEKMMMVGRMSAQVPMNMAITGGMLTFYKSPMAVIFWQWLNQSFN 131
Query: 583 AVVNYTNRSGDAPISTSRLLASXXXXXXXXXXXXXXXNSKVKNMKPIYARLVPFAAVCGA 762
AVVNYTNRSGD S S+LL S NS VK P+ RLVPF AVC A
Sbjct: 132 AVVNYTNRSGDGG-SVSQLLVSYCAATGGALTAALGLNSLVKKAPPLVGRLVPFVAVCVA 190
Query: 763 NFINIPMMRSNEIXNGTPVFTADG 834
N INIPMMR E+ G + +G
Sbjct: 191 NSINIPMMRRGELTEGIDILDENG 214
>Z69902-2|CAA93764.1| 326|Caenorhabditis elegans Hypothetical
protein C47D12.3 protein.
Length = 326
Score = 208 bits (507), Expect = 5e-54
Identities = 102/207 (49%), Positives = 131/207 (63%), Gaps = 3/207 (1%)
Frame = +1
Query: 223 DLDKPRYDQSTYSGRAKHFLQLTNPLNVLASDAELDEAQRIVAEFRKTRRMPPGYDEEKL 402
D+ +PR+DQ+T+ GR +F N LN+ S+A+L++A+ IV E+ K + P ++L
Sbjct: 13 DISRPRWDQNTFQGRVNYFFSTANCLNLFVSNAKLEKARNIVLEY-KQGKYDPNMTVDEL 71
Query: 403 WSTKYLYDSAFHPDTGEKMFVLGRMAAQAPMNTIITGCMITFYKTTPATVFWQWVNQTFN 582
W K LYDSAFHPDTGEKMF+LGRM+AQ P N +ITG M+TFY+ P +F+ WVNQ+FN
Sbjct: 72 WKAKTLYDSAFHPDTGEKMFILGRMSAQVPCNMLITGGMLTFYQKLPHVIFFHWVNQSFN 131
Query: 583 AVVNYTNRSGDAPISTSRLLASXXXXXXXXXXXXXXXN---SKVKNMKPIYARLVPFAAV 753
A+VNYTNRSG L+ S N K KN PI ARLVPFAA+
Sbjct: 132 AIVNYTNRSGTHKQDDRTLILSYCGATTGALSCALSFNYMLKKWKNAPPILARLVPFAAI 191
Query: 754 CGANFINIPMMRSNEIXNGTPVFTADG 834
AN INIPMMR+ E NG PV +G
Sbjct: 192 AFANAINIPMMRNKEFTNGIPVEDGEG 218
>Z81534-3|CAB04347.3| 328|Caenorhabditis elegans Hypothetical
protein F37H8.4 protein.
Length = 328
Score = 204 bits (498), Expect = 6e-53
Identities = 98/204 (48%), Positives = 130/204 (63%)
Frame = +1
Query: 223 DLDKPRYDQSTYSGRAKHFLQLTNPLNVLASDAELDEAQRIVAEFRKTRRMPPGYDEEKL 402
D+ KP++ Q TY GR +HF LTNPL + +S A ++ ++IV ++ K ++ P +L
Sbjct: 13 DISKPQWSQRTYYGRVRHFFTLTNPLTLTSSVARQEQCRQIVLDY-KNGKVSPTLTVSEL 71
Query: 403 WSTKYLYDSAFHPDTGEKMFVLGRMAAQAPMNTIITGCMITFYKTTPATVFWQWVNQTFN 582
W K LYDS +HPDTGEKMF LGRM+AQ P N +I G +++ Y+T P VF W+NQ+FN
Sbjct: 72 WKAKTLYDSTYHPDTGEKMFFLGRMSAQMPANMLINGMLLSLYRTFPGVVFSHWINQSFN 131
Query: 583 AVVNYTNRSGDAPISTSRLLASXXXXXXXXXXXXXXXNSKVKNMKPIYARLVPFAAVCGA 762
AVVNYTNRSG++ S RL+ S N+ VKN I ARLVPFAAV A
Sbjct: 132 AVVNYTNRSGNSKTSNERLILSYSCATGGAMAAALSLNAMVKNKNSIAARLVPFAAVALA 191
Query: 763 NFINIPMMRSNEIXNGTPVFTADG 834
N INIPM+RSNE+ G + +G
Sbjct: 192 NTINIPMIRSNEVTEGLELRDENG 215
>Z48009-1|CAA88076.1| 329|Caenorhabditis elegans Hypothetical
protein AH6.2 protein.
Length = 329
Score = 201 bits (491), Expect = 4e-52
Identities = 97/196 (49%), Positives = 123/196 (62%)
Frame = +1
Query: 223 DLDKPRYDQSTYSGRAKHFLQLTNPLNVLASDAELDEAQRIVAEFRKTRRMPPGYDEEKL 402
D+ KP++DQ TY+GRAKHF TNPL + +S + ++ + IV + KT + P ++L
Sbjct: 13 DISKPKWDQGTYAGRAKHFFSSTNPLTLFSSRIQQEKCKEIVTNY-KTGVISPTLTVDEL 71
Query: 403 WSTKYLYDSAFHPDTGEKMFVLGRMAAQAPMNTIITGCMITFYKTTPATVFWQWVNQTFN 582
W K LYDS +HPDTGEKMF LGRM+AQ P N + TG ++ Y+T P VF W NQ+FN
Sbjct: 72 WKAKTLYDSTYHPDTGEKMFFLGRMSAQMPGNMVTTGMLLGLYRTLPGVVFSHWFNQSFN 131
Query: 583 AVVNYTNRSGDAPISTSRLLASXXXXXXXXXXXXXXXNSKVKNMKPIYARLVPFAAVCGA 762
AVVNYTNRSG++ + RL S N VKN + ARLVPFAA+ A
Sbjct: 132 AVVNYTNRSGNSKATNERLFVSYCCATSGAMTVALGLNKMVKNSHGLAARLVPFAAIALA 191
Query: 763 NFINIPMMRSNEIXNG 810
N INIPMMRSNE G
Sbjct: 192 NAINIPMMRSNEASEG 207
>AL021175-7|CAE54921.1| 329|Caenorhabditis elegans Hypothetical
protein Y6E2A.9a protein.
Length = 329
Score = 188 bits (459), Expect = 3e-48
Identities = 89/203 (43%), Positives = 123/203 (60%)
Frame = +1
Query: 223 DLDKPRYDQSTYSGRAKHFLQLTNPLNVLASDAELDEAQRIVAEFRKTRRMPPGYDEEKL 402
D+ K ++D TYSGR KH+ NP+ + S + ++IV +++K + P ++L
Sbjct: 13 DISKSKWDLDTYSGRVKHYFASANPMTLFTSSNTQEMCRKIVVDYKKGI-INPELTMDEL 71
Query: 403 WSTKYLYDSAFHPDTGEKMFVLGRMAAQAPMNTIITGCMITFYKTTPATVFWQWVNQTFN 582
WS K LYDS +HPDTGEKMF LGRM+AQ P N +ITG +++ Y+T P +F W+NQ+FN
Sbjct: 72 WSAKILYDSVYHPDTGEKMFCLGRMSAQTPANMVITGMLLSCYRTCPGIIFSHWINQSFN 131
Query: 583 AVVNYTNRSGDAPISTSRLLASXXXXXXXXXXXXXXXNSKVKNMKPIYARLVPFAAVCGA 762
A+VNYTNRSG+ + +LL S N VKN + RLVPF AV A
Sbjct: 132 AIVNYTNRSGNCRTTNQQLLYSYFCATGAATTAALGLNMMVKNSHGLAGRLVPFVAVAVA 191
Query: 763 NFINIPMMRSNEIXNGTPVFTAD 831
N INIPM+R+NE+ G + D
Sbjct: 192 NAINIPMVRANELSEGIELCDED 214
>AL021175-8|CAA15970.2| 201|Caenorhabditis elegans Hypothetical
protein Y6E2A.9b protein.
Length = 201
Score = 178 bits (433), Expect = 5e-45
Identities = 84/187 (44%), Positives = 114/187 (60%)
Frame = +1
Query: 223 DLDKPRYDQSTYSGRAKHFLQLTNPLNVLASDAELDEAQRIVAEFRKTRRMPPGYDEEKL 402
D+ K ++D TYSGR KH+ NP+ + S + ++IV +++K + P ++L
Sbjct: 13 DISKSKWDLDTYSGRVKHYFASANPMTLFTSSNTQEMCRKIVVDYKKGI-INPELTMDEL 71
Query: 403 WSTKYLYDSAFHPDTGEKMFVLGRMAAQAPMNTIITGCMITFYKTTPATVFWQWVNQTFN 582
WS K LYDS +HPDTGEKMF LGRM+AQ P N +ITG +++ Y+T P +F W+NQ+FN
Sbjct: 72 WSAKILYDSVYHPDTGEKMFCLGRMSAQTPANMVITGMLLSCYRTCPGIIFSHWINQSFN 131
Query: 583 AVVNYTNRSGDAPISTSRLLASXXXXXXXXXXXXXXXNSKVKNMKPIYARLVPFAAVCGA 762
A+VNYTNRSG+ + +LL S N VKN + RLVPF AV A
Sbjct: 132 AIVNYTNRSGNCRTTNQQLLYSYFCATGAATTAALGLNMMVKNSHGLAGRLVPFVAVAVA 191
Query: 763 NFINIPM 783
N INIPM
Sbjct: 192 NAINIPM 198
>U29082-7|AAA68404.3| 319|Caenorhabditis elegans Hypothetical
protein C14F5.4 protein.
Length = 319
Score = 166 bits (403), Expect = 2e-41
Identities = 87/206 (42%), Positives = 118/206 (57%), Gaps = 2/206 (0%)
Frame = +1
Query: 223 DLDKPRYDQSTYSGRAKHFLQLTNPLNVLASDAELDEAQRIVAEFRKTRRMPPGYDEEKL 402
D D+PRYDQST+ GR +HF +T+PL +S EL A ++ + R+ + +P +E L
Sbjct: 4 DPDQPRYDQSTFYGRLRHFAGMTDPLIAFSSTTELITASELMQKCREKKPVPATLEE--L 61
Query: 403 WSTKYLYDSAFHPDTGEKMFVLGRMAAQAPMNTIITGCMITFYKTTPATVFWQWVNQTFN 582
++ L SAFHPDTGE GRM T++ G M+ +YK+TPA +FWQW NQ+FN
Sbjct: 62 HRSQRLCQSAFHPDTGELQNFAGRMCFNVWGGTMLCGAMMIWYKSTPAVIFWQWANQSFN 121
Query: 583 AVVNYTNRSGDAPISTSRLLASXXXXXXXXXXXXXXXNS--KVKNMKPIYARLVPFAAVC 756
A+VNYTNR+ + ++T L+ S + K P+ RLVP AV
Sbjct: 122 ALVNYTNRNAKSTLTTKDLVVSYSTAVSGALAMAIGLKTYFAKKQSSPLAQRLVPLGAVA 181
Query: 757 GANFINIPMMRSNEIXNGTPVFTADG 834
AN INIPMMR NE+ G V ADG
Sbjct: 182 VANAINIPMMRQNELKEGMTVTDADG 207
>Z48045-8|CAI46557.1| 331|Caenorhabditis elegans Hypothetical
protein C41C4.10 protein.
Length = 331
Score = 106 bits (255), Expect = 2e-23
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 7/213 (3%)
Frame = +1
Query: 214 PQIDLDKPRYDQSTYSGRAKHFLQLTNPLNVLASDAELDEAQRIVAEFRKTRRMPPGYDE 393
P+ L +PR+ Q T+ GR H L + +P + AS+ +L+E+ ++ F+ +
Sbjct: 14 PKFKLGEPRFPQDTFLGRYLHCLDVIDPRTLFASNKKLEESLELLNSFKAGTAT--NVPD 71
Query: 394 EKLWSTKYLYDSAFHPDTGEKMFVLGRMAAQAPMNTIITGCMITFYKTTPATVFWQWVNQ 573
+ LW + L + HPDTGEK+ RM+ P I M+ + P +FWQW+NQ
Sbjct: 72 KSLWEAQKLKSAILHPDTGEKVLPPFRMSGFVPFGWITVTGMLLPNPSWPTLLFWQWMNQ 131
Query: 574 TFNAVVNYTNRSGDAPISTSRLLASXXXXXXXXXXXXXXXN---SKVKNMKP----IYAR 732
+ NA VNY NR+ P S+ + + K ++ P I R
Sbjct: 132 SHNACVNYANRNATQPQPLSKYIGAYGAAVTAACSISGGLTYFIKKASSLPPTTRIIIQR 191
Query: 733 LVPFAAVCGANFINIPMMRSNEIXNGTPVFTAD 831
VP A A+ +N+ MR NE+ G V+ D
Sbjct: 192 FVPLPATSLASSLNVICMRWNELETGIQVYEKD 224
>AL713992-1|CAL69742.1| 74|Caenorhabditis elegans Hypothetical
protein VY10G11R.2 protein.
Length = 74
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/70 (35%), Positives = 34/70 (48%)
Frame = +1
Query: 265 RAKHFLQLTNPLNVLASDAELDEAQRIVAEFRKTRRMPPGYDEEKLWSTKYLYDSAFHPD 444
+ L+ T +S A+L A+ I E+ K + P +KLW K L HPD
Sbjct: 3 KTSEHLETTMGSEHFSSIAKLQNARTIALEY-KHEKYDPNMTVDKLWKAKTL-----HPD 56
Query: 445 TGEKMFVLGR 474
TGE M +LGR
Sbjct: 57 TGENMAILGR 66
>AL110477-19|CAJ43447.1| 327|Caenorhabditis elegans Hypothetical
protein Y113G7B.5b protein.
Length = 327
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 381 GRHTTCFSEFSNDPLCLVEFRIRSQHVERIGQLQEVL 271
GR C+S SNDP C V +S+ +E+ QL +L
Sbjct: 81 GRGAICYSRNSNDPGCTVRRTSQSKSIEKT-QLDAIL 116
>AL110477-18|CAB54327.1| 312|Caenorhabditis elegans Hypothetical
protein Y113G7B.5a protein.
Length = 312
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 381 GRHTTCFSEFSNDPLCLVEFRIRSQHVERIGQLQEVL 271
GR C+S SNDP C V +S+ +E+ QL +L
Sbjct: 81 GRGAICYSRNSNDPGCTVRRTSQSKSIEKT-QLDAIL 116
>U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein.
Length = 1786
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +3
Query: 462 RARTHGGTGSHEHYHYGMYDNILQDNAGHGFLAMGESDLQRCREL 596
+A H G G+HE LQD+ G + GE LQR +EL
Sbjct: 847 QAAEHEGGGAHEKDFSDNLTQGLQDSTGVHMIHTGEQLLQRSQEL 891
>U21731-1|AAA85852.1| 985|Caenorhabditis elegans UNC-44 protein.
Length = 985
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +3
Query: 462 RARTHGGTGSHEHYHYGMYDNILQDNAGHGFLAMGESDLQRCREL 596
+A H G G+HE LQD+ G + GE LQR +EL
Sbjct: 17 QAAEHEGGGAHEKDFSDNLTQGLQDSTGVHMIHTGEQLLQRSQEL 61
>Z69661-5|CAA93495.2| 346|Caenorhabditis elegans Hypothetical
protein F48F7.7 protein.
Length = 346
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -1
Query: 522 YHTSRNDSVHGSLCRHASEHEH 457
Y+ S+N HG LC H+S HEH
Sbjct: 228 YNASKN---HGLLCTHSSYHEH 246
>U23516-4|AAG38880.1| 210|Caenorhabditis elegans Hypothetical
protein B0416.3 protein.
Length = 210
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +1
Query: 139 NASGFSGLFSFIAL*TERYQRAMGSPQIDLDKPRYDQSTYSGRAKHFLQLTNPLNVL 309
++SG F+ E+ +R + ++ YD +Y GR H L LT ++VL
Sbjct: 9 SSSGCDNQIEFLVSEAEQRRRRVNHLDTEVHGLGYDPFSYCGRRVHVLLLTKLISVL 65
>AL132876-3|CAD21657.2| 746|Caenorhabditis elegans Hypothetical
protein Y105E8A.3 protein.
Length = 746
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 444 HGRENVRARTHGGTGSHEHYHYG 512
HG + +HGG GSH H H G
Sbjct: 532 HGGGSSHGHSHGGGGSHGHSHGG 554
>U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical protein
F42C5.10 protein.
Length = 1292
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 444 HGRENVRARTHGGTGSHEHYHYGMYDNILQDNAGHGFLAMGESDLQ-RCRELHESIRR 614
H ++ A H T +EH H+ Y +NA H E D+Q + + ++SIR+
Sbjct: 963 HYHQDENAHQHS-TAENEHIHH--YHTTSNENAHHHHSVQNEKDIQYQLAQSNQSIRQ 1017
>AL021571-3|CAC70102.2| 344|Caenorhabditis elegans Hypothetical
protein T19A6.4 protein.
Length = 344
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/25 (44%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = -2
Query: 218 CGL-PMALWYLSVYNAMKENSPENP 147
CG+ PM+ + L +Y+A+K+N+P P
Sbjct: 235 CGIMPMSTFVLVIYSAVKKNNPSLP 259
>Z74031-6|CAB54239.1| 227|Caenorhabditis elegans Hypothetical
protein F32D8.5b protein.
Length = 227
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = -2
Query: 524 VIIHPVMIVFMGACAAMRPSTNIFSPVSG--WKALSYKYLVLHSFSSSYP 381
V++ PV+ ++ AA RPS +F+ V+ LS+ L+LH + +P
Sbjct: 90 VVMVPVLSSYLWEAAAERPSMMMFAIVANTFLVLLSFTPLLLHFLAKRFP 139
>Z74031-5|CAA98457.1| 225|Caenorhabditis elegans Hypothetical
protein F32D8.5a protein.
Length = 225
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = -2
Query: 524 VIIHPVMIVFMGACAAMRPSTNIFSPVSG--WKALSYKYLVLHSFSSSYP 381
V++ PV+ ++ AA RPS +F+ V+ LS+ L+LH + +P
Sbjct: 88 VVMVPVLSSYLWEAAAERPSMMMFAIVANTFLVLLSFTPLLLHFLAKRFP 137
>U29244-16|AAQ23126.1| 172|Caenorhabditis elegans Hypothetical
protein ZK1248.19 protein.
Length = 172
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/57 (26%), Positives = 30/57 (52%)
Frame = -1
Query: 450 SRVWMEGAVVQIFSTP*LLFIVSGRHTTCFSEFSNDPLCLVEFRIRSQHVERIGQLQ 280
+++ + A+ + F TP ++ + +G+HT E L + E RSQ + + G L+
Sbjct: 72 TKIAIRTAISKAFKTPEIMALFAGKHTGLLRE----KLMMTETNYRSQKMPKQGYLE 124
>AC025716-1|AAK39606.1| 788|Caenorhabditis elegans Hypothetical
protein Y39G10AR.11 protein.
Length = 788
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 187 ERYQRAMGSPQIDLDKPRYDQSTYSGRAK 273
E YQ ++ S Q+D D+ R D Y G+A+
Sbjct: 562 ELYQNSVSSLQMDRDRLRKDVDLYKGKAE 590
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,874,872
Number of Sequences: 27780
Number of extensions: 441336
Number of successful extensions: 1301
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1289
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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