Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_B10
         (532 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    23   1.7  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   2.2  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   3.9  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   5.1  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    21   8.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.9  

>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -3

Query: 179 GYAQLNLFHKYSIF*HLIYKIIILSVWIHSFKFY 78
           G+  LN  HKY    HL+    IL +   +F+ Y
Sbjct: 88  GFTILNSMHKYQPRFHLVRANDILKLPYSTFRTY 121


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 310 GYPAAKLRSYHWSV 351
           G  A+KL S+HW +
Sbjct: 233 GMAASKLNSFHWHI 246


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -2

Query: 180 RICSAEFISQIFNILTSYLQNNYFVSLDSLI 88
           R+C+    +  FN     ++  YF  LDSL+
Sbjct: 247 RLCNKLKRATRFNDFNEAIKEAYFPKLDSLV 277


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 141 ILTSYLQNNYFV 106
           ILTS+L N YF+
Sbjct: 289 ILTSFLNNFYFI 300


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 167 LNLFHKYSIF*HLIYKIIILSVWIHSFKFY 78
           LN  HKY    HL+    IL +   +F+ Y
Sbjct: 101 LNSMHKYQPRFHLVRANDILKLPYSTFRTY 130


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 157 FTNIQYFDI 131
           FTN+QY DI
Sbjct: 113 FTNLQYIDI 121


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,045
Number of Sequences: 336
Number of extensions: 2283
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12887571
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)