Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_A22
         (464 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC070260-1|AAH70260.1|   97|Homo sapiens chromosome 6 open readi...    66   7e-11
AL096817-2|CAI18941.2|   97|Homo sapiens chromosome 6 open readi...    66   7e-11
AF311339-1|AAK38513.1|  138|Homo sapiens DC18 protein.                 57   3e-08
AK128446-1|BAC87444.1|  121|Homo sapiens protein ( Homo sapiens ...    29   6.0  

>BC070260-1|AAH70260.1|   97|Homo sapiens chromosome 6 open reading
           frame 162 protein.
          Length = 97

 Score = 65.7 bits (153), Expect = 7e-11
 Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
 Frame = +2

Query: 77  GLRSMRSTTAFXVVNFELYAKPNIVIMSIGLTCFGLALGYIAYMRQKYES-MGYYSAIDK 253
           GLR +R+TT F  VN EL+ KPN  +M+ GL    L + YI Y+    E+    Y AID 
Sbjct: 24  GLRGVRTTTLFRAVNPELFIKPNKPVMAFGLVTLSLCVAYIGYLHAIQENKKDLYEAIDS 83

Query: 254 DGKVIFEKKKSKWD 295
           +G     +K SKWD
Sbjct: 84  EGHSYMRRKTSKWD 97


>AL096817-2|CAI18941.2|   97|Homo sapiens chromosome 6 open reading
           frame 162 protein.
          Length = 97

 Score = 65.7 bits (153), Expect = 7e-11
 Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
 Frame = +2

Query: 77  GLRSMRSTTAFXVVNFELYAKPNIVIMSIGLTCFGLALGYIAYMRQKYES-MGYYSAIDK 253
           GLR +R+TT F  VN EL+ KPN  +M+ GL    L + YI Y+    E+    Y AID 
Sbjct: 24  GLRGVRTTTLFRAVNPELFIKPNKPVMAFGLVTLSLCVAYIGYLHAIQENKKDLYEAIDS 83

Query: 254 DGKVIFEKKKSKWD 295
           +G     +K SKWD
Sbjct: 84  EGHSYMRRKTSKWD 97


>AF311339-1|AAK38513.1|  138|Homo sapiens DC18 protein.
          Length = 138

 Score = 57.2 bits (132), Expect = 3e-08
 Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
 Frame = +2

Query: 77  GLRSMRSTTAFXVVNFELYAKPNIVIMSIGLTCFGLALGYIAYMRQKYES-MGYYSAIDK 253
           GLR +R+TT F  VN EL+ KPN  +M+ GL    L + YI Y+    E+    Y AID 
Sbjct: 24  GLRGVRTTTLFRAVNPELFIKPNKPVMAFGLVTLSLCVAYIGYLHAIQENKKDLYEAIDS 83

Query: 254 DGKVIFE 274
           +G  ++E
Sbjct: 84  EGHKLYE 90


>AK128446-1|BAC87444.1|  121|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46589 fis, clone THYMU3044188. ).
          Length = 121

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -3

Query: 366 YFNHYLLL-QYINSYLQFLQIL*FQSHFDFFFSKITFPSLS 247
           + + +L L  ++ S+L FL  L F S F FF+   +FP  S
Sbjct: 5   FLSFFLFLPSFLFSFLFFLSFLFFSSFFSFFYFLSSFPLFS 45


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,375,312
Number of Sequences: 237096
Number of extensions: 929084
Number of successful extensions: 1172
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1170
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3986009860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)