BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_A20
(615 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY095191-1|AAM12284.1| 597|Drosophila melanogaster LD36009p pro... 161 5e-40
AE014134-2606|AAF53465.1| 597|Drosophila melanogaster CG4162-PA... 161 5e-40
AB017359-1|BAA83721.1| 597|Drosophila melanogaster serine palmi... 161 5e-40
AY071153-1|AAL48775.1| 596|Drosophila melanogaster RE18318p pro... 29 5.0
AE013599-2764|AAF57640.2| 596|Drosophila melanogaster CG15078-P... 29 5.0
AE013599-2763|AAO41353.2| 929|Drosophila melanogaster CG15078-P... 29 5.0
AE013599-2762|ABI31105.1| 940|Drosophila melanogaster CG15078-P... 29 5.0
AY051582-1|AAK93006.1| 529|Drosophila melanogaster GH23019p pro... 28 8.7
AE014134-1281|AAN10632.1| 529|Drosophila melanogaster CG12789-P... 28 8.7
AE014134-1280|AAF52518.3| 563|Drosophila melanogaster CG12789-P... 28 8.7
>AY095191-1|AAM12284.1| 597|Drosophila melanogaster LD36009p
protein.
Length = 597
Score = 161 bits (392), Expect = 5e-40
Identities = 69/111 (62%), Positives = 86/111 (77%)
Frame = +2
Query: 245 SFEKCSLLTAVLTHVGLYVLMFLGFVNQLIFKPKAATEKNRXGYAPLYDPFXQFFSRYVY 424
SFE+ L TA LT++G Y+LM LG++NQL+F PK ATEK R GY LYD F F+SRYVY
Sbjct: 114 SFEEVPLHTACLTYLGFYLLMILGYINQLLFVPKVATEKGRDGYVALYDAFESFYSRYVY 173
Query: 425 RRVRHCFNRPICSAPGAEVVLKEWESTDHNWTFKFTGVERRCVNLGSYNYL 577
RR++ C+NRPICS PG E+ LK+ + D+ W+FKFTG E RC+NLGSYNYL
Sbjct: 174 RRIKDCWNRPICSVPGDELTLKDRVTDDYGWSFKFTGTETRCLNLGSYNYL 224
>AE014134-2606|AAF53465.1| 597|Drosophila melanogaster CG4162-PA
protein.
Length = 597
Score = 161 bits (392), Expect = 5e-40
Identities = 69/111 (62%), Positives = 86/111 (77%)
Frame = +2
Query: 245 SFEKCSLLTAVLTHVGLYVLMFLGFVNQLIFKPKAATEKNRXGYAPLYDPFXQFFSRYVY 424
SFE+ L TA LT++G Y+LM LG++NQL+F PK ATEK R GY LYD F F+SRYVY
Sbjct: 114 SFEEVPLHTACLTYLGFYLLMILGYINQLLFVPKVATEKGRDGYVALYDAFESFYSRYVY 173
Query: 425 RRVRHCFNRPICSAPGAEVVLKEWESTDHNWTFKFTGVERRCVNLGSYNYL 577
RR++ C+NRPICS PG E+ LK+ + D+ W+FKFTG E RC+NLGSYNYL
Sbjct: 174 RRIKDCWNRPICSVPGDELTLKDRVTDDYGWSFKFTGTETRCLNLGSYNYL 224
>AB017359-1|BAA83721.1| 597|Drosophila melanogaster serine
palmitoyl transferase LCB2subunit protein.
Length = 597
Score = 161 bits (392), Expect = 5e-40
Identities = 69/111 (62%), Positives = 86/111 (77%)
Frame = +2
Query: 245 SFEKCSLLTAVLTHVGLYVLMFLGFVNQLIFKPKAATEKNRXGYAPLYDPFXQFFSRYVY 424
SFE+ L TA LT++G Y+LM LG++NQL+F PK ATEK R GY LYD F F+SRYVY
Sbjct: 114 SFEEVPLHTACLTYLGFYLLMILGYINQLLFVPKVATEKGRDGYVALYDAFESFYSRYVY 173
Query: 425 RRVRHCFNRPICSAPGAEVVLKEWESTDHNWTFKFTGVERRCVNLGSYNYL 577
RR++ C+NRPICS PG E+ LK+ + D+ W+FKFTG E RC+NLGSYNYL
Sbjct: 174 RRIKDCWNRPICSVPGDELTLKDRVTDDYGWSFKFTGTETRCLNLGSYNYL 224
>AY071153-1|AAL48775.1| 596|Drosophila melanogaster RE18318p
protein.
Length = 596
Score = 29.1 bits (62), Expect = 5.0
Identities = 27/103 (26%), Positives = 41/103 (39%)
Frame = +2
Query: 29 KNGFVDIGDGDSLKTTKKSYEQDEKLINGKIKDRKNGYMKSTQSNGSTPKMTQVEGGGLP 208
KN V + G + YE DE + K K+ K + Q+ + Q G L
Sbjct: 434 KNWLVRLITGTTDAAAHYDYEYDEDDDDDKEKEEKKSIKERLQAIQEVSQTVQNTIGYLA 493
Query: 209 KIDWSKYDTFPGSFEKCSLLTAVLTHVGLYVLMFLGFVNQLIF 337
+ S +TF S + + L VL + VL F+ L+F
Sbjct: 494 SLGESTINTFNFSVPELTWLAVVLLLGAILVLHFVPLRWLLLF 536
>AE013599-2764|AAF57640.2| 596|Drosophila melanogaster CG15078-PB,
isoform B protein.
Length = 596
Score = 29.1 bits (62), Expect = 5.0
Identities = 27/103 (26%), Positives = 41/103 (39%)
Frame = +2
Query: 29 KNGFVDIGDGDSLKTTKKSYEQDEKLINGKIKDRKNGYMKSTQSNGSTPKMTQVEGGGLP 208
KN V + G + YE DE + K K+ K + Q+ + Q G L
Sbjct: 434 KNWLVRLITGTTDAAAHYDYEYDEDDDDDKEKEEKKSIKERLQAIQEVSQTVQNTIGYLA 493
Query: 209 KIDWSKYDTFPGSFEKCSLLTAVLTHVGLYVLMFLGFVNQLIF 337
+ S +TF S + + L VL + VL F+ L+F
Sbjct: 494 SLGESTINTFNFSVPELTWLAVVLLLGAILVLHFVPLRWLLLF 536
>AE013599-2763|AAO41353.2| 929|Drosophila melanogaster CG15078-PA,
isoform A protein.
Length = 929
Score = 29.1 bits (62), Expect = 5.0
Identities = 27/103 (26%), Positives = 41/103 (39%)
Frame = +2
Query: 29 KNGFVDIGDGDSLKTTKKSYEQDEKLINGKIKDRKNGYMKSTQSNGSTPKMTQVEGGGLP 208
KN V + G + YE DE + K K+ K + Q+ + Q G L
Sbjct: 767 KNWLVRLITGTTDAAAHYDYEYDEDDDDDKEKEEKKSIKERLQAIQEVSQTVQNTIGYLA 826
Query: 209 KIDWSKYDTFPGSFEKCSLLTAVLTHVGLYVLMFLGFVNQLIF 337
+ S +TF S + + L VL + VL F+ L+F
Sbjct: 827 SLGESTINTFNFSVPELTWLAVVLLLGAILVLHFVPLRWLLLF 869
>AE013599-2762|ABI31105.1| 940|Drosophila melanogaster CG15078-PC,
isoform C protein.
Length = 940
Score = 29.1 bits (62), Expect = 5.0
Identities = 27/103 (26%), Positives = 41/103 (39%)
Frame = +2
Query: 29 KNGFVDIGDGDSLKTTKKSYEQDEKLINGKIKDRKNGYMKSTQSNGSTPKMTQVEGGGLP 208
KN V + G + YE DE + K K+ K + Q+ + Q G L
Sbjct: 778 KNWLVRLITGTTDAAAHYDYEYDEDDDDDKEKEEKKSIKERLQAIQEVSQTVQNTIGYLA 837
Query: 209 KIDWSKYDTFPGSFEKCSLLTAVLTHVGLYVLMFLGFVNQLIF 337
+ S +TF S + + L VL + VL F+ L+F
Sbjct: 838 SLGESTINTFNFSVPELTWLAVVLLLGAILVLHFVPLRWLLLF 880
>AY051582-1|AAK93006.1| 529|Drosophila melanogaster GH23019p
protein.
Length = 529
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1
Query: 447 LKQCRTRRYTYREKNXSNGSY 385
L CR RRY R K +NG Y
Sbjct: 444 LASCRNRRYDLRTKTKTNGQY 464
>AE014134-1281|AAN10632.1| 529|Drosophila melanogaster CG12789-PB,
isoform B protein.
Length = 529
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1
Query: 447 LKQCRTRRYTYREKNXSNGSY 385
L CR RRY R K +NG Y
Sbjct: 444 LASCRNRRYDLRTKTKTNGQY 464
>AE014134-1280|AAF52518.3| 563|Drosophila melanogaster CG12789-PA,
isoform A protein.
Length = 563
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1
Query: 447 LKQCRTRRYTYREKNXSNGSY 385
L CR RRY R K +NG Y
Sbjct: 478 LASCRNRRYDLRTKTKTNGQY 498
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,354,677
Number of Sequences: 53049
Number of extensions: 532516
Number of successful extensions: 1787
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1787
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -