Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_A19
(796 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1450.04 |tef5||translation elongation factor EF-1 beta subun... 111 1e-25
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 31 0.25
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 29 0.77
SPAC1952.15c |rec24|mug6|meiotic recombination protein Rec24|Sch... 29 0.77
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 29 1.0
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 29 1.0
SPBP35G2.03c |sgo1||shugoshin Sgo1|Schizosaccharomyces pombe|chr... 28 1.3
SPCC895.03c |||SUA5/yciO/yrdC family|Schizosaccharomyces pombe|c... 28 1.8
SPCC4B3.08 |||C-terminal domain kinase I |Schizosaccharomyces po... 28 1.8
SPCC306.04c |set1||histone lysine methyltransferase Set1|Schizos... 27 2.3
SPAC21E11.07 ||SPAC2C4.01|glycine cleavage T-protein|Schizosacch... 27 3.1
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 27 4.1
SPBC3B8.09 |||U3 snoRNP-associated protein Utp3 |Schizosaccharom... 27 4.1
SPBC2F12.13 |klp5|sot1|kinesin-like protein Klp5|Schizosaccharom... 26 5.4
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 26 7.1
SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr... 25 9.4
SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch... 25 9.4
SPBC36B7.07 |tlg1||SNARE Tgl1|Schizosaccharomyces pombe|chr 2|||... 25 9.4
SPAC824.09c |||GTPase activating protein |Schizosaccharomyces po... 25 9.4
>SPCC1450.04 |tef5||translation elongation factor EF-1 beta subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 214
Score = 111 bits (267), Expect = 1e-25
Identities = 51/86 (59%), Positives = 65/86 (75%)
Frame = +3
Query: 537 RLAAYNAKKAKKPVLIAKSNIILDVKPWDDETDMAALEQAVRSISTDGLLWGAAKLXPLA 716
R+A YN KKA KP + KS + LDVKPWDDET M LE+AVRSI DGL+WG +KL P+
Sbjct: 111 RVAEYNKKKAAKPKAVHKSLVTLDVKPWDDETPMDELEKAVRSIQMDGLVWGLSKLVPVG 170
Query: 717 YGIHKLQISCVVEDDKVSIDWLTXEI 794
+G++K QI+ VVEDDKVS++ L E+
Sbjct: 171 FGVNKFQINLVVEDDKVSLEALQEEL 196
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 30.7 bits (66), Expect = 0.25
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 267 TELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLES 386
T+ +K+ S E ENK LK +ID+ +N + S V+ + S
Sbjct: 388 TDAESKLSSFEQENKSLKGSIDEYQNNLSSKDKMVKQVSS 427
Score = 27.9 bits (59), Expect = 1.8
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +3
Query: 249 LAGVPNTELSTKVISLENENKDLKKAID----DLRNLVISLQVRVETLESSSSITSDCIQ 416
LA L+T+++ L+N+ KDL D DLR L SL+ V +L+ I S+ ++
Sbjct: 1612 LAENERLSLTTRMLDLQNQVKDLSNIKDSLSEDLRTL-RSLEDSVASLQKECKIKSNTVE 1670
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 29.1 bits (62), Expect = 0.77
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +3
Query: 153 LLHEKVWLDR-NVYNDAEKAYYESLSKMDSVATLAGVPNTELSTKVISLENENKDLKKAI 329
+L EK+ + Y A A+Y+S+S ++ +AT +P + T ++S +++ A+
Sbjct: 785 MLSEKIREEGLRTYLLAYAAFYDSVS-LEFLATTFDLP-VQRVTVIVSRLLSKREIHAAL 842
Query: 330 DDLRNLVISLQVRVETLES 386
D + +I +V + LES
Sbjct: 843 DQVHGAIIFERVEINKLES 861
>SPAC1952.15c |rec24|mug6|meiotic recombination protein
Rec24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 350
Score = 29.1 bits (62), Expect = 0.77
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +3
Query: 72 NLIVXTNFFIVFKYNSNLNFGIISMAALLHEKVWLDRNVYNDAEKAYYESLSKM 233
+LI+ T + + N+N G+IS A L V+L++ ++N A E L K+
Sbjct: 199 DLIIITQS--IMQNNANNGTGVISRAKFLEFYVFLEQLIFNKLSFASVEQLEKL 250
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 28.7 bits (61), Expect = 1.0
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 11/129 (8%)
Frame = +3
Query: 81 VXTNFFIVFKYNSNLNF---GIISMAALLHEKVWLDRNVYNDAEKAY---YESLSKMDSV 242
+ F +VF+ N +F G+ S+ E + + V N+ KA + LS +DS
Sbjct: 79 ILQQFSVVFQGNELKDFESEGVFSILEKFPELSYFNDAVKNNKTKALSIIQKLLSTVDSS 138
Query: 243 A-TLAGVPNTELSTKVISLENE----NKDLKKAIDDLRNLVISLQVRVETLESSSSITSD 407
+++ P + LS +L + N D+ K +D+L L ++ + SSS T
Sbjct: 139 TNSVSRDPFSVLSIDDSALTEKLNTINLDIDKILDELDTTRSQLHSIIKLPDRSSSFTLQ 198
Query: 408 CIQVQSEKP 434
CI +S +P
Sbjct: 199 CIN-ESVRP 206
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 28.7 bits (61), Expect = 1.0
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +3
Query: 216 ESLSKMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLESSSS 395
E + M ++ ++G T + + +E+ENK L + D+RN V L+ + E S
Sbjct: 242 ERTAAMQAIDDISGTIET-IKSDCYKVESENKGLINEVMDMRNFVQQLEQELYAFEDDYS 300
>SPBP35G2.03c |sgo1||shugoshin Sgo1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 319
Score = 28.3 bits (60), Expect = 1.3
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +3
Query: 171 WLDRNVYNDAEKAYYESLSKMDSVATLAGVP-NTELSTKVISLENENKDLKKAIDDLRNL 347
+++ N+ N+ +K ESL K + NT+LS K+ ENE +DL + L++
Sbjct: 5 FINSNINNE-DKLPMESLKKKFLKQNREIIKINTQLSIKIRESENEIQDLIQENFTLKSY 63
Query: 348 VISLQVR 368
++ L+ R
Sbjct: 64 LVKLEAR 70
>SPCC895.03c |||SUA5/yciO/yrdC family|Schizosaccharomyces pombe|chr
3|||Manual
Length = 408
Score = 27.9 bits (59), Expect = 1.8
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +1
Query: 349 SSACKSVLKPWNHPAVSPLIVFKCSQKNLQQLLL 450
+ A S+ K N PA +PLIV S L++LLL
Sbjct: 73 TEAVLSIYKAKNRPADNPLIVHVASLDQLRRLLL 106
>SPCC4B3.08 |||C-terminal domain kinase I |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 218
Score = 27.9 bits (59), Expect = 1.8
Identities = 18/94 (19%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = +3
Query: 156 LHEKVWLDRNVYNDAEKAY--YESLSKMDSVATLAGVPNTELSTKVISLENENKDLKKAI 329
LHEK +D N Y DA +E SK +T + ++ ++ +K +++ I
Sbjct: 116 LHEKKVIDDNQYKDAMATVEAHEQASKSGDTSTSGAISKNDILKRIEEDRERHKRMRENI 175
Query: 330 DDLRNLVISLQVRVETLESSSSITSDCIQVQSEK 431
+ + ++ T + + + ++ + EK
Sbjct: 176 WAISEPELEAEIAWNTTQGITESDLESLKDEYEK 209
>SPCC306.04c |set1||histone lysine methyltransferase
Set1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 920
Score = 27.5 bits (58), Expect = 2.3
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
Frame = -1
Query: 184 FRSNQTFSCNKAAMLIIPKFRFELYL-----NTIKKLVH-TIKLNFYVNKVNRANLTA 29
FRSN + S IIP LYL +TI + H T ++ +N+VN L A
Sbjct: 700 FRSNTSGSAKSEGYYIIPTTEKSLYLPLRNRSTIDTISHSTSRITSRMNRVNNRRLAA 757
>SPAC21E11.07 ||SPAC2C4.01|glycine cleavage
T-protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 325
Score = 27.1 bits (57), Expect = 3.1
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +3
Query: 198 AEKAYYESLSKMD--SVATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRV 371
AE + + L K + S ++A +P+ ELS KVI E LK + ++ S Q +
Sbjct: 99 AESDFLKHLKKYNLRSRCSIAKIPSEELSIKVIWDVKEESRLKDTVAYAKDPRFSKQRLL 158
Query: 372 ETLESSSSITS 404
+ +S+ TS
Sbjct: 159 RMIVPTSTCTS 169
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 26.6 bits (56), Expect = 4.1
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -3
Query: 614 LYIQNNIRLCN*HWLFSFLCIICSKTLFLYLSCFS 510
LY+Q + W+F + C+ +LF +CFS
Sbjct: 210 LYLQGDPERVKKAWVFQSRLLFCTASLFEKTACFS 244
>SPBC3B8.09 |||U3 snoRNP-associated protein Utp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 597
Score = 26.6 bits (56), Expect = 4.1
Identities = 15/62 (24%), Positives = 27/62 (43%)
Frame = +3
Query: 174 LDRNVYNDAEKAYYESLSKMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVI 353
+DR V + + YYESL K +A N +L +I + ++ D R + +
Sbjct: 471 VDREVEDQDDLDYYESLDKKSKMAKKLRKENHDLERDLIRASRHPELIELGEGDKRGITL 530
Query: 354 SL 359
+
Sbjct: 531 DI 532
>SPBC2F12.13 |klp5|sot1|kinesin-like protein
Klp5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 883
Score = 26.2 bits (55), Expect = 5.4
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +3
Query: 210 YYESLSKMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLESS 389
+YE A A TE+ +IS++ KAI +LR + L+ R+ ++ S
Sbjct: 373 HYEETHNTLKYANRAKNIKTEVLRNMISVDRHVSQYVKAIVELREQISELENRLAQIDLS 432
Query: 390 S 392
S
Sbjct: 433 S 433
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 25.8 bits (54), Expect = 7.1
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 225 SKMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQ 362
+KM SV EL ++ SLE NKD + LR+ + SL+
Sbjct: 1475 AKMFSVQVQYEKREQELQKRIASLEKVNKDSLIDVRALRDRIASLE 1520
>SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 25.4 bits (53), Expect = 9.4
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +3
Query: 276 STKVISLENENKDLKKAIDDLRNLVISLQVRVETLESSS 392
S ++ L+ EN+ L DLR I+L+ ++ET+++ +
Sbjct: 32 SIRIKELQLENERLLSENIDLRTTAINLEEQLETVQNEN 70
>SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1822
Score = 25.4 bits (53), Expect = 9.4
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +2
Query: 38 VCSINFIYVKIQFNCMXQLFYCI*IQFKSKFWNNQHGCFI 157
+C N +I NCM QL +F+ K WN FI
Sbjct: 1517 ICRDNITLSRIGTNCMQQLLSGNAYRFEVKDWNLVADMFI 1556
>SPBC36B7.07 |tlg1||SNARE Tgl1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 225
Score = 25.4 bits (53), Expect = 9.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 261 PNTELSTKVISLENENKDLKKAID 332
PNTEL+ + L KDLK A++
Sbjct: 37 PNTELTYAIDELSETLKDLKAAVE 60
>SPAC824.09c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 320
Score = 25.4 bits (53), Expect = 9.4
Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Frame = +3
Query: 102 VFKYNSNLNFGIISMAALLHE-KVWLDRNVYNDAEKAYYESLSKMDSVATLAGVPNTELS 278
V + N++L+ S ++ H K V N K E++S S+A + PN
Sbjct: 143 VSEVNASLDLNTASRSSSAHSVKSTSSATVTNVTSKK--EAISATTSLAQSS--PNLASL 198
Query: 279 TKVISLENENKDLKKAIDDLRNLVISLQVRVETLESSSSITSDCIQVQSEKPAAAST 449
+K S + ++ DL++ ++SL SSSSIT++ P + ST
Sbjct: 199 SKQPSTVHAPSTRQR---DLKSSILSLYASPRPQVSSSSITTNATYQNLPSPVSTST 252
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,849,286
Number of Sequences: 5004
Number of extensions: 52151
Number of successful extensions: 171
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 171
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 387388442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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