Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_A19
         (796 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical p...   128   6e-30
L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical pr...   115   3e-26
AC024805-5|AAK39339.1|  494|Caenorhabditis elegans Hypothetical ...    29   2.9  
AC024805-4|ABA00170.1|  318|Caenorhabditis elegans Hypothetical ...    29   2.9  
AC024805-3|AAK39338.1|  801|Caenorhabditis elegans Hypothetical ...    29   2.9  
Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical pr...    28   6.7  
AF016440-6|AAN84798.1|  525|Caenorhabditis elegans Hypothetical ...    28   6.7  
AF016440-5|AAB65904.2|  535|Caenorhabditis elegans Hypothetical ...    28   6.7  
AC025727-10|AAK66029.1|  707|Caenorhabditis elegans Hypothetical...    28   6.7  
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr...    28   8.9  
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr...    28   8.9  
AC006607-7|AAL00855.1|  789|Caenorhabditis elegans Hypothetical ...    28   8.9  

>Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical
           protein Y41E3.10a protein.
          Length = 263

 Score =  128 bits (308), Expect = 6e-30
 Identities = 76/177 (42%), Positives = 96/177 (54%)
 Frame = +3

Query: 264 NTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLESSSSITSDCIQVQSEKPAAA 443
           N E    V  L  E+  L K +DDL +LV  LQ+++ TL    + +   +   +  PAAA
Sbjct: 72  NKEGGEDVSKLREEHSALAKKVDDLASLVAELQLQLSTLRQGQTSS---VAAPAAAPAAA 128

Query: 444 STXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAAYNAKKAKKPVLIAKSNIILDVKPWD 623
                                          RLAAY AKKA K   IAKS++ILDVKPWD
Sbjct: 129 KEEAAGDDDFDLFGSEDEEEDEEKKKVVEE-RLAAYAAKKATKAGPIAKSSVILDVKPWD 187

Query: 624 DETDMAALEQAVRSISTDGLLWGAAKLXPLAYGIHKLQISCVVEDDKVSIDWLTXEI 794
           DETD+  +E+ VRSI  DGL+WG AKL P+ YGI KLQI  V+ED KVS+D L  +I
Sbjct: 188 DETDLGEMEKLVRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVDDLIEKI 244


>L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical
           protein F54H12.6 protein.
          Length = 213

 Score =  115 bits (277), Expect = 3e-26
 Identities = 56/86 (65%), Positives = 66/86 (76%)
 Frame = +3

Query: 537 RLAAYNAKKAKKPVLIAKSNIILDVKPWDDETDMAALEQAVRSISTDGLLWGAAKLXPLA 716
           RLAAY  KKAKK   IAKS++ILDVKPWDDETD+  +E+ VRSI  DGL+WG AKL P+ 
Sbjct: 109 RLAAYAEKKAKKAGPIAKSSVILDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPIG 168

Query: 717 YGIHKLQISCVVEDDKVSIDWLTXEI 794
           YGI KLQI  V+ED KVS+D L  +I
Sbjct: 169 YGIKKLQIITVIEDLKVSVDDLIEKI 194


>AC024805-5|AAK39339.1|  494|Caenorhabditis elegans Hypothetical
           protein Y51H7C.6b protein.
          Length = 494

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 14/58 (24%), Positives = 30/58 (51%)
 Frame = +3

Query: 255 GVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLESSSSITSDCIQVQSE 428
           G+  T L+  ++ +EN  K L  A+ ++  L  ++  RV  L+ + +    C+Q+  +
Sbjct: 82  GLAVTRLNNHMLVVENSAKQLTSALKNISVLADTISGRVSALDVAKTRVVGCLQLAGD 139


>AC024805-4|ABA00170.1|  318|Caenorhabditis elegans Hypothetical
           protein Y51H7C.6c protein.
          Length = 318

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 14/58 (24%), Positives = 30/58 (51%)
 Frame = +3

Query: 255 GVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLESSSSITSDCIQVQSE 428
           G+  T L+  ++ +EN  K L  A+ ++  L  ++  RV  L+ + +    C+Q+  +
Sbjct: 82  GLAVTRLNNHMLVVENSAKQLTSALKNISVLADTISGRVSALDVAKTRVVGCLQLAGD 139


>AC024805-3|AAK39338.1|  801|Caenorhabditis elegans Hypothetical
           protein Y51H7C.6a protein.
          Length = 801

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 14/58 (24%), Positives = 30/58 (51%)
 Frame = +3

Query: 255 GVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLESSSSITSDCIQVQSE 428
           G+  T L+  ++ +EN  K L  A+ ++  L  ++  RV  L+ + +    C+Q+  +
Sbjct: 82  GLAVTRLNNHMLVVENSAKQLTSALKNISVLADTISGRVSALDVAKTRVVGCLQLAGD 139


>Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical
           protein C08H9.2 protein.
          Length = 1220

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 10/35 (28%), Positives = 23/35 (65%)
 Frame = +3

Query: 258 VPNTELSTKVISLENENKDLKKAIDDLRNLVISLQ 362
           +PN E ++  I +E + + +KKA+ ++R +V  ++
Sbjct: 454 IPNEETNSDEIVVEGKKEGVKKAVTEIRAIVTKIE 488


>AF016440-6|AAN84798.1|  525|Caenorhabditis elegans Hypothetical
           protein F29G9.2b protein.
          Length = 525

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 12/43 (27%), Positives = 27/43 (62%)
 Frame = +3

Query: 282 KVISLENENKDLKKAIDDLRNLVISLQVRVETLESSSSITSDC 410
           K++S+E +    ++ +D+LR L + L  + ++L S+++   DC
Sbjct: 200 KMVSIEEKLCTKEREVDELRQLCMYLDEQRQSLMSNAAANVDC 242


>AF016440-5|AAB65904.2|  535|Caenorhabditis elegans Hypothetical
           protein F29G9.2a protein.
          Length = 535

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 12/43 (27%), Positives = 27/43 (62%)
 Frame = +3

Query: 282 KVISLENENKDLKKAIDDLRNLVISLQVRVETLESSSSITSDC 410
           K++S+E +    ++ +D+LR L + L  + ++L S+++   DC
Sbjct: 210 KMVSIEEKLCTKEREVDELRQLCMYLDEQRQSLMSNAAANVDC 252


>AC025727-10|AAK66029.1|  707|Caenorhabditis elegans Hypothetical
           protein Y73E7A.8 protein.
          Length = 707

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 10/45 (22%), Positives = 26/45 (57%)
 Frame = +3

Query: 243 ATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVET 377
           A + G+  + +  + + ++ +  +L   I+DLR+L+  +  R+E+
Sbjct: 635 ARIFGIKTSSIPEETLKIQTKKSELTDEINDLRDLMEQMDERIES 679


>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
           protein C18C4.5b protein.
          Length = 1046

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +3

Query: 276 STKVISLENENKDLKKAIDDLRNLVISLQVRVETLESSSSITSDCIQV 419
           S+K   L  EN+ LK  ++DL+  V S   +++   S      D I V
Sbjct: 136 SSKTDKLSEENETLKLKVEDLQKQVSSFMSQMQDKNSEIQKMKDAISV 183


>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
           protein C18C4.5a protein.
          Length = 1022

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +3

Query: 276 STKVISLENENKDLKKAIDDLRNLVISLQVRVETLESSSSITSDCIQV 419
           S+K   L  EN+ LK  ++DL+  V S   +++   S      D I V
Sbjct: 136 SSKTDKLSEENETLKLKVEDLQKQVSSFMSQMQDKNSEIQKMKDAISV 183


>AC006607-7|AAL00855.1|  789|Caenorhabditis elegans Hypothetical
           protein C09E7.9 protein.
          Length = 789

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
 Frame = +3

Query: 270 ELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLES-SSSITSDCIQVQSE 428
           +L +++ ++E+ NK+ KKAI DL N +  L+  +E   S S  +  +  Q+++E
Sbjct: 419 QLKSELKNVEHLNKEHKKAI-DLANEISKLKTEIERETSISKQLEKEISQLRTE 471


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,557,888
Number of Sequences: 27780
Number of extensions: 288661
Number of successful extensions: 865
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)