Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_A16
(714 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC824.06 |tim14||TIM23 translocase complex subunit Tim14|Schiz... 85 9e-18
SPBC713.10 |tim16||TIM23 translocase complex subunit Tim16|Schiz... 36 0.004
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 36 0.006
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 33 0.054
SPAC14C4.13 |rad17||RFC related checkpoint protein Rad17|Schizos... 32 0.071
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 31 0.12
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 31 0.16
SPAC1071.09c |||DNAJ domain protein, DNAJC9 family|Schizosacchar... 31 0.16
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 30 0.38
SPAC926.05c |||diphthamide biosynthesis protein Dph4 |Schizosacc... 29 0.50
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 29 0.50
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 29 0.50
SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha... 27 2.0
SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces pomb... 27 2.0
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2... 27 3.5
SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces po... 26 4.7
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz... 26 6.1
SPACUNK4.13c |||GTPase Ylf2 |Schizosaccharomyces pombe|chr 1|||M... 26 6.1
>SPAC824.06 |tim14||TIM23 translocase complex subunit
Tim14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 140
Score = 85.0 bits (201), Expect = 9e-18
Identities = 49/118 (41%), Positives = 71/118 (60%), Gaps = 1/118 (0%)
Frame = +3
Query: 195 SSIILAGLGMAAVGFAGRYVLKQMPNASMKFAEAVKNLPKFDSETLANSKYYKGGFEPKM 374
SS IL G+G+AA AG+ V K+ + + KGGFE KM
Sbjct: 2 SSAILLGVGIAATAAAGKI--------------GVDAFRKYRNLNGGVKAFLKGGFESKM 47
Query: 375 TKREAALILGVSP-TASKAKIRDAHRKIMLLNHPDRGGSPLIAAKINEAKDLLESGKS 545
++ EA IL ++ T ++ KI++AHR++ML NHPDRGGSP +A+K+NEAK LL++ +S
Sbjct: 48 SRAEAIQILSLNNRTLTRQKIKEAHRRLMLANHPDRGGSPYVASKVNEAKSLLDADRS 105
>SPBC713.10 |tim16||TIM23 translocase complex subunit
Tim16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 128
Score = 36.3 bits (80), Expect = 0.004
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 5/103 (4%)
Frame = +3
Query: 243 GRYVLKQMPNASMKFAEAVK----NLPKFDSETLANSKYYKGGFEPKMTKREAALILGVS 410
GR+++ S F +A K N + + A SK +MT +EA IL +
Sbjct: 8 GRFIIVGSQVMSKAFVQAYKQMIANAAQQSTGQAAASKSSTAVRRGEMTIQEAGSILNIK 67
Query: 411 PTA-SKAKIRDAHRKIMLLNHPDRGGSPLIAAKINEAKDLLES 536
P + + ++ +K+ +N P +GGS + +K+ A + L+S
Sbjct: 68 PESLEEGELEKRFQKMFEINDPKKGGSFYLQSKVFRAHEKLKS 110
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 35.9 bits (79), Expect = 0.006
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = +3
Query: 369 KMTKREAALILGVSPTASKAKIRDAHRKIMLLNHPDRGGSPLIA----AKINEAKDLLES 536
K +++ ILGVS A+ +I+ A+RK+ L+ HPD+ L A ++ EA +L
Sbjct: 344 KSKRKDHYKILGVSKEATDIEIKKAYRKLALVYHPDKNAGNLEAEARFKEVGEAYTILSD 403
Query: 537 GKS 545
+S
Sbjct: 404 PES 406
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 32.7 bits (71), Expect = 0.054
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +3
Query: 396 ILGVSPTASKAKIRDAHRKIMLLNHPDR 479
+L V TAS+A+++ A+RK+ L HPD+
Sbjct: 10 VLNVDVTASQAELKKAYRKLALKYHPDK 37
>SPAC14C4.13 |rad17||RFC related checkpoint protein
Rad17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 606
Score = 32.3 bits (70), Expect = 0.071
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 276 SMKFAEAVKNLPKFDSETLANSKYYKGGFEPKMTKRE 386
S++ A+ ++ L K DSE A K YK + PK K E
Sbjct: 351 SLEAAQVLERLSKSDSEAYARFKNYKSAYIPKSDKNE 387
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 31.5 bits (68), Expect = 0.12
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +3
Query: 399 LGVSPTASKAKIRDAHRKIMLLNHPDR 479
L V P AS+A+++ A+RK+ L HPD+
Sbjct: 11 LEVRPEASEAELKKAYRKLALKYHPDK 37
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 31.1 bits (67), Expect = 0.16
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +3
Query: 396 ILGVSPTASKAKIRDAHRKIMLLNHPDR 479
ILGVS AS+++IR A+R++ HPD+
Sbjct: 11 ILGVSKDASESEIRKAYRQLTKQWHPDK 38
>SPAC1071.09c |||DNAJ domain protein, DNAJC9
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 282
Score = 31.1 bits (67), Expect = 0.16
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 396 ILGVSPTASKAKIRDAHRKIMLLNHPDR 479
+LGV AS IR A+RK L +HPDR
Sbjct: 35 VLGVEKDASDELIRRAYRKKALQHHPDR 62
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 29.9 bits (64), Expect = 0.38
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 396 ILGVSPTASKAKIRDAHRKIMLLNHPDR 479
ILG T+S +IR + K++L HPDR
Sbjct: 16 ILGAESTSSYVEIRQQYLKLVLRYHPDR 43
>SPAC926.05c |||diphthamide biosynthesis protein Dph4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 139
Score = 29.5 bits (63), Expect = 0.50
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Frame = +3
Query: 414 TASKAKIRDAHRKIMLLNHPDR-GGSPLIAAKINEAKDLLE--SGKS*AQQY 560
T + +I++A+RK +LL HPD+ P + I++ K+ + S + QQY
Sbjct: 14 TYTDDEIKEAYRKALLLFHPDKCKEKPSVVYTIDQVKEAYQVLSSEKDRQQY 65
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 29.5 bits (63), Expect = 0.50
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 399 LGVSPTASKAKIRDAHRKIMLLNHPDRGGSPLIAAKINEAKDLLE 533
LGVS +AS ++I+ A+ K+ HPD K E K E
Sbjct: 91 LGVSKSASASEIKSAYYKLAKQYHPDANPDKAAQDKFVEIKQAYE 135
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 29.5 bits (63), Expect = 0.50
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Frame = +3
Query: 396 ILGVSPTASKAKIRDAHRKIMLLNHPDRG-----GSPLIAAKINEAKDLLESGK 542
+LG+S A+ I+ A+RK+ + HPD+ G+ KI+EA +L K
Sbjct: 12 LLGISTDATAVDIKKAYRKLAVKYHPDKNPDDPQGASEKFQKISEAYQVLGDEK 65
>SPAC23E2.03c |ste7||meiotic suppressor protein
Ste7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 27.5 bits (58), Expect = 2.0
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Frame = +3
Query: 270 NASMKFAEAVKN--LPKFDSETLANSKYYKGGF--EPKMTKREAALILGVSPTASKAKIR 437
+A+ F + K LP+FDS T + S Y + F P +A T+S + +
Sbjct: 158 SANSSFGSSAKTFQLPEFDSVTPSASLYKQPSFNSNPAPITTSSATHTSQFSTSSSSSVN 217
Query: 438 DAHRKIMLLN 467
H +M+ N
Sbjct: 218 SVHTPVMVPN 227
>SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 209
Score = 27.5 bits (58), Expect = 2.0
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +3
Query: 378 KREAALILGVSPTASKAKIRDAHRKIMLLNHPDRGGSPLIAAKINEAKDLLESGKS 545
K A +L + P S IR+ +RK L+ HPD+ AA +A D+L+ +S
Sbjct: 29 KLNAYDVLDILPGMSVDDIRNLYRKKSLMIHPDKNRDNPKAA---DAFDILKKAES 81
>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 26.6 bits (56), Expect = 3.5
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +3
Query: 396 ILGVSPTASKAKIRDAHRKIMLLNHPDR 479
IL V AS +I+ +++++ LL+HPD+
Sbjct: 10 ILEVHFEASAEEIKKSYKRLALLHHPDK 37
>SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 743
Score = 26.2 bits (55), Expect = 4.7
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 544 DFPLSSRSLASLIFAAMR 491
DFPL S SL+SL+F +R
Sbjct: 452 DFPLPSPSLSSLLFPTLR 469
>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 25.8 bits (54), Expect = 6.1
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 396 ILGVSPTASKAKIRDAHRKIMLLNHPDRG-GSPLIAAKIN 512
+LG++ A +I A RK L HPD+ P A K +
Sbjct: 13 LLGINEDAQDQEIHRAWRKTSLKYHPDKNPNDPKAAEKFH 52
>SPACUNK4.13c |||GTPase Ylf2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 407
Score = 25.8 bits (54), Expect = 6.1
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = -3
Query: 409 LTPKIRAASLFVIFGSNPPL*YLEFANVSESNLGKFFTASANFIEAFGI 263
LTP+ AA G N L + A S NL +FTAS ++A+ I
Sbjct: 292 LTPE-EAAQECASLGKNSQLSEIICAGYSALNLIHYFTASEKIVQAWTI 339
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,585,721
Number of Sequences: 5004
Number of extensions: 47667
Number of successful extensions: 106
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 106
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 333194204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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