Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_A16
         (714 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    26   1.4  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    25   1.8  
AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    24   4.1  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    24   4.1  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    24   4.1  

>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
 Frame = +3

Query: 255 LKQMPNASMKFA--EAVKNLPKFDSETLANSKYYKGGFEPKMTKREAALILGVSPTASKA 428
           L  +PNA++  A  +      K   E L N +     F  +  K++ ALI    P   K 
Sbjct: 439 LDGVPNAALTAAIRKHTDIFKKLFQECLDNER-----FPDEWKKQKLALI----PKPGKP 489

Query: 429 K-IRDAHRKIMLLNHPDRGGSPLIAAKINEAKDLLESGKS*AQQY 560
             +  + R I+LLN+P +    L+ ++IN+  +  ES +    QY
Sbjct: 490 PGLASSFRPILLLNNPGKVYERLLLSRINDVIEDPESPRLAENQY 534


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = -3

Query: 328 VSESNLGKFFTASANFIEAFGICFRTYRPAKPTAAIPRP 212
           + E+ L +     A ++EA+     T+ P +PT ++PRP
Sbjct: 401 LDENQLEEACNHLAEYLEAYWRA--THPPVRPTPSVPRP 437


>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = +3

Query: 156 LLSKPFNTQVIMASSIILAGLGMAAVG-FAGRYVLKQMPNASMKF-AEAVKNLPKFDSET 329
           LLS   +  VIMA  +I AG+   + G  A  Y L + P    K  AE    +P  D+  
Sbjct: 300 LLSINKHVAVIMALDMIFAGIDTTSAGSVAILYCLAKNPEKQAKLRAELRTIMPTKDTRL 359

Query: 330 LAN 338
            A+
Sbjct: 360 TAS 362


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +2

Query: 248 ICSKANAKRFNEICRSSEEFT 310
           ICS+ANA+ + +I RSS  FT
Sbjct: 395 ICSRANARCYEQI-RSSIAFT 414


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +2

Query: 248 ICSKANAKRFNEICRSSEEFT 310
           ICS+ANA+ + +I RSS  FT
Sbjct: 395 ICSRANARCYEQI-RSSIAFT 414


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,915
Number of Sequences: 2352
Number of extensions: 12255
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)