Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_A13
(742 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY094649-1|AAM11002.1| 190|Drosophila melanogaster AT09528p pro... 153 2e-37
AJ002208-1|CAC20098.1| 190|Drosophila melanogaster dfh protein. 153 2e-37
AF208492-1|AAG35733.1| 190|Drosophila melanogaster frataxin-lik... 153 2e-37
AF208491-1|AAG35732.1| 147|Drosophila melanogaster frataxin-lik... 153 2e-37
AE014298-1283|AAF46449.1| 190|Drosophila melanogaster CG8971-PA... 153 2e-37
BT023106-1|AAY55522.1| 208|Drosophila melanogaster IP08717p pro... 31 2.2
BT022958-1|AAY55374.1| 208|Drosophila melanogaster IP08417p pro... 31 2.2
AE014296-1185|AAN12072.1| 209|Drosophila melanogaster CG32391-P... 31 2.2
AY113261-1|AAM29266.1| 199|Drosophila melanogaster AT15479p pro... 30 2.9
AE014297-232|AAN13279.1| 199|Drosophila melanogaster CG31542-PA... 30 2.9
AJ276482-1|CAB81549.1| 769|Drosophila melanogaster putative Sec... 29 5.0
BT001619-1|AAN71374.1| 773|Drosophila melanogaster RE35250p pro... 29 6.6
AY565480-1|AAS74490.1| 320|Drosophila melanogaster 5-HT1B protein. 29 6.6
AY565371-1|AAS74381.1| 320|Drosophila melanogaster 5-HT1B protein. 29 6.6
AE014297-319|AAF51979.2| 773|Drosophila melanogaster CG1250-PB,... 29 6.6
AE014297-318|AAF51978.2| 773|Drosophila melanogaster CG1250-PA,... 29 6.6
>AY094649-1|AAM11002.1| 190|Drosophila melanogaster AT09528p
protein.
Length = 190
Score = 153 bits (372), Expect = 2e-37
Identities = 74/126 (58%), Positives = 91/126 (72%), Gaps = 4/126 (3%)
Frame = +1
Query: 199 NNRSLSDNIRNEX--EPLVFEXACNEXLESLCDFFEQLIEDAPNLKGADVTYSDGVLTIS 372
N R S I E + +E C++ L++LCD+FE+L E+A L+G DV YSDGVLT++
Sbjct: 54 NRRLFSSQIETESTLDGATYERVCSDTLDALCDYFEELTENASELQGTDVAYSDGVLTVN 113
Query: 373 LG-KHGTYVINRQIPNKQIWLSSPTSGPKRYDLV-LEGGGYWIYKHDGVTLHKLLQQEIS 546
LG +HGTYVINRQ PNKQIWLSSPTSGPKRYD V G WIYKH G +LH+LLQQEI
Sbjct: 114 LGGQHGTYVINRQTPNKQIWLSSPTSGPKRYDFVGTVAAGRWIYKHSGQSLHELLQQEIP 173
Query: 547 VIVKDK 564
I+K +
Sbjct: 174 GILKSQ 179
>AJ002208-1|CAC20098.1| 190|Drosophila melanogaster dfh protein.
Length = 190
Score = 153 bits (372), Expect = 2e-37
Identities = 74/126 (58%), Positives = 91/126 (72%), Gaps = 4/126 (3%)
Frame = +1
Query: 199 NNRSLSDNIRNEX--EPLVFEXACNEXLESLCDFFEQLIEDAPNLKGADVTYSDGVLTIS 372
N R S I E + +E C++ L++LCD+FE+L E+A L+G DV YSDGVLT++
Sbjct: 54 NRRLFSSQIETESTLDGATYERVCSDTLDALCDYFEELTENASELQGTDVAYSDGVLTVN 113
Query: 373 LG-KHGTYVINRQIPNKQIWLSSPTSGPKRYDLV-LEGGGYWIYKHDGVTLHKLLQQEIS 546
LG +HGTYVINRQ PNKQIWLSSPTSGPKRYD V G WIYKH G +LH+LLQQEI
Sbjct: 114 LGGQHGTYVINRQTPNKQIWLSSPTSGPKRYDFVGTVAAGRWIYKHSGQSLHELLQQEIP 173
Query: 547 VIVKDK 564
I+K +
Sbjct: 174 GILKSQ 179
>AF208492-1|AAG35733.1| 190|Drosophila melanogaster frataxin-like
protein protein.
Length = 190
Score = 153 bits (372), Expect = 2e-37
Identities = 74/126 (58%), Positives = 91/126 (72%), Gaps = 4/126 (3%)
Frame = +1
Query: 199 NNRSLSDNIRNEX--EPLVFEXACNEXLESLCDFFEQLIEDAPNLKGADVTYSDGVLTIS 372
N R S I E + +E C++ L++LCD+FE+L E+A L+G DV YSDGVLT++
Sbjct: 54 NRRLFSSQIETESTLDGATYERVCSDTLDALCDYFEELTENASELQGTDVAYSDGVLTVN 113
Query: 373 LG-KHGTYVINRQIPNKQIWLSSPTSGPKRYDLV-LEGGGYWIYKHDGVTLHKLLQQEIS 546
LG +HGTYVINRQ PNKQIWLSSPTSGPKRYD V G WIYKH G +LH+LLQQEI
Sbjct: 114 LGGQHGTYVINRQTPNKQIWLSSPTSGPKRYDFVGTVAAGRWIYKHSGQSLHELLQQEIP 173
Query: 547 VIVKDK 564
I+K +
Sbjct: 174 GILKSQ 179
>AF208491-1|AAG35732.1| 147|Drosophila melanogaster frataxin-like
protein protein.
Length = 147
Score = 153 bits (372), Expect = 2e-37
Identities = 74/126 (58%), Positives = 91/126 (72%), Gaps = 4/126 (3%)
Frame = +1
Query: 199 NNRSLSDNIRNEX--EPLVFEXACNEXLESLCDFFEQLIEDAPNLKGADVTYSDGVLTIS 372
N R S I E + +E C++ L++LCD+FE+L E+A L+G DV YSDGVLT++
Sbjct: 11 NRRLFSSQIETESTLDGATYERVCSDTLDALCDYFEELTENASELQGTDVAYSDGVLTVN 70
Query: 373 LG-KHGTYVINRQIPNKQIWLSSPTSGPKRYDLV-LEGGGYWIYKHDGVTLHKLLQQEIS 546
LG +HGTYVINRQ PNKQIWLSSPTSGPKRYD V G WIYKH G +LH+LLQQEI
Sbjct: 71 LGGQHGTYVINRQTPNKQIWLSSPTSGPKRYDFVGTVAAGRWIYKHSGQSLHELLQQEIP 130
Query: 547 VIVKDK 564
I+K +
Sbjct: 131 GILKSQ 136
>AE014298-1283|AAF46449.1| 190|Drosophila melanogaster CG8971-PA
protein.
Length = 190
Score = 153 bits (372), Expect = 2e-37
Identities = 74/126 (58%), Positives = 91/126 (72%), Gaps = 4/126 (3%)
Frame = +1
Query: 199 NNRSLSDNIRNEX--EPLVFEXACNEXLESLCDFFEQLIEDAPNLKGADVTYSDGVLTIS 372
N R S I E + +E C++ L++LCD+FE+L E+A L+G DV YSDGVLT++
Sbjct: 54 NRRLFSSQIETESTLDGATYERVCSDTLDALCDYFEELTENASELQGTDVAYSDGVLTVN 113
Query: 373 LG-KHGTYVINRQIPNKQIWLSSPTSGPKRYDLV-LEGGGYWIYKHDGVTLHKLLQQEIS 546
LG +HGTYVINRQ PNKQIWLSSPTSGPKRYD V G WIYKH G +LH+LLQQEI
Sbjct: 114 LGGQHGTYVINRQTPNKQIWLSSPTSGPKRYDFVGTVAAGRWIYKHSGQSLHELLQQEIP 173
Query: 547 VIVKDK 564
I+K +
Sbjct: 174 GILKSQ 179
>BT023106-1|AAY55522.1| 208|Drosophila melanogaster IP08717p
protein.
Length = 208
Score = 30.7 bits (66), Expect = 2.2
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -2
Query: 522 VECDSIVFVDPVASSLEN*VIALWSRRGGA-QPNLFIWYLPVYHICP 385
+ CD I +DP A+ V L R P+L IW+ P + +CP
Sbjct: 3 LHCDRICSLDPGANLAARMVSGLGKRALICIAPSLCIWHFPTFPVCP 49
>BT022958-1|AAY55374.1| 208|Drosophila melanogaster IP08417p
protein.
Length = 208
Score = 30.7 bits (66), Expect = 2.2
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -2
Query: 522 VECDSIVFVDPVASSLEN*VIALWSRRGGA-QPNLFIWYLPVYHICP 385
+ CD I +DP A+ V L R P+L IW+ P + +CP
Sbjct: 3 LHCDRICSLDPGANLAARMVSGLGKRALICIAPSLCIWHFPTFPVCP 49
>AE014296-1185|AAN12072.1| 209|Drosophila melanogaster CG32391-PA
protein.
Length = 209
Score = 30.7 bits (66), Expect = 2.2
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -2
Query: 522 VECDSIVFVDPVASSLEN*VIALWSRRGGA-QPNLFIWYLPVYHICP 385
+ CD I +DP A+ V L R P+L IW+ P + +CP
Sbjct: 3 LHCDRICSLDPGANLAARMVSGLGKRALICIAPSLCIWHFPTFPVCP 49
>AY113261-1|AAM29266.1| 199|Drosophila melanogaster AT15479p
protein.
Length = 199
Score = 30.3 bits (65), Expect = 2.9
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = +1
Query: 7 ADDTSCXHASQNHLPXSHFTSCFGISSVPAGGWCGCKSXVSPPSRYAKAVVX*KPSVLNV 186
AD +C + P T C PA C C V+PP + +P+ NV
Sbjct: 100 ADHITCSRGPREQPPALE-TRCT-CREKPAKTECHCAPPVAPPPNQQQQQAMAQPTYANV 157
Query: 187 SCGFN 201
+CG N
Sbjct: 158 TCGQN 162
>AE014297-232|AAN13279.1| 199|Drosophila melanogaster CG31542-PA
protein.
Length = 199
Score = 30.3 bits (65), Expect = 2.9
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = +1
Query: 7 ADDTSCXHASQNHLPXSHFTSCFGISSVPAGGWCGCKSXVSPPSRYAKAVVX*KPSVLNV 186
AD +C + P T C PA C C V+PP + +P+ NV
Sbjct: 100 ADHITCSRGPREQPPALE-TRCT-CREKPAKTECHCAPPVAPPPNQQQQQAMAQPTYANV 157
Query: 187 SCGFN 201
+CG N
Sbjct: 158 TCGQN 162
>AJ276482-1|CAB81549.1| 769|Drosophila melanogaster putative Sec23
protein protein.
Length = 769
Score = 29.5 bits (63), Expect = 5.0
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = -1
Query: 475 RELSHSALVQTWGSSTKSVYLVSAGLSHMSRAFLMIWLIHHR 350
R + + L ++W +T +V+ +SAG + A LM ++ +R
Sbjct: 496 RRIRVTTLARSWADATSNVHHISAGFDQEAAAVLMARMVVYR 537
>BT001619-1|AAN71374.1| 773|Drosophila melanogaster RE35250p
protein.
Length = 773
Score = 29.1 bits (62), Expect = 6.6
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -1
Query: 475 RELSHSALVQTWGSSTKSVYLVSAGLSHMSRAFLMIWLIHHR 350
R + + L + W +T +V+ +SAG + A LM ++ +R
Sbjct: 500 RRIRVTTLARNWADATSNVHHISAGFDQEAAAVLMARMVVYR 541
>AY565480-1|AAS74490.1| 320|Drosophila melanogaster 5-HT1B protein.
Length = 320
Score = 29.1 bits (62), Expect = 6.6
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 28 HASQNHLPXSHFTSCFGISSVPAGGWCGCKSXVSPPSR 141
HA+Q+HL SH + ++ A G GC + SP +
Sbjct: 133 HATQHHLIASHLNAITPLAQSIAMGGVGCLTTTSPSEK 170
>AY565371-1|AAS74381.1| 320|Drosophila melanogaster 5-HT1B protein.
Length = 320
Score = 29.1 bits (62), Expect = 6.6
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 28 HASQNHLPXSHFTSCFGISSVPAGGWCGCKSXVSPPSR 141
HA+Q+HL SH + ++ A G GC + SP +
Sbjct: 133 HATQHHLIASHLNAITPLAQSIAMGGVGCLTTTSPSEK 170
>AE014297-319|AAF51979.2| 773|Drosophila melanogaster CG1250-PB,
isoform B protein.
Length = 773
Score = 29.1 bits (62), Expect = 6.6
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -1
Query: 475 RELSHSALVQTWGSSTKSVYLVSAGLSHMSRAFLMIWLIHHR 350
R + + L + W +T +V+ +SAG + A LM ++ +R
Sbjct: 500 RRIRVTTLARNWADATSNVHHISAGFDQEAAAVLMARMVVYR 541
>AE014297-318|AAF51978.2| 773|Drosophila melanogaster CG1250-PA,
isoform A protein.
Length = 773
Score = 29.1 bits (62), Expect = 6.6
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -1
Query: 475 RELSHSALVQTWGSSTKSVYLVSAGLSHMSRAFLMIWLIHHR 350
R + + L + W +T +V+ +SAG + A LM ++ +R
Sbjct: 500 RRIRVTTLARNWADATSNVHHISAGFDQEAAAVLMARMVVYR 541
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,734,670
Number of Sequences: 53049
Number of extensions: 585026
Number of successful extensions: 1599
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1589
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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