Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_A10
(831 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0090 + 26358051-26359157,26359582-26359701,26359968-263600... 32 0.64
02_05_1262 + 35312313-35312343,35312840-35312886,35313614-353136... 31 0.85
11_04_0471 - 18121023-18121213,18121954-18122080,18122221-181222... 31 1.1
02_01_0642 - 4803464-4805665,4806231-4806320 30 2.0
04_01_0301 + 4016588-4016627,4016715-4018837 29 3.4
02_01_0267 - 1766071-1766261,1766368-1766569,1766719-1766814,176... 29 4.5
08_01_0044 + 301981-302826,302972-303580 29 6.0
03_05_0944 + 29046793-29046922,29048091-29048464,29048556-290486... 29 6.0
06_03_0232 - 18507872-18508792 28 7.9
>01_06_0090 +
26358051-26359157,26359582-26359701,26359968-26360099,
26360194-26360375,26360488-26360602,26362001-26362135,
26362261-26362395
Length = 641
Score = 31.9 bits (69), Expect = 0.64
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 646 ENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKVLHI-AELQEI 810
E E+A S E E + ESEN++L EL++ EV + +++H+ E+ E+
Sbjct: 106 EAELAAKSSELEKCKDTAARLESENMRLCAELDAAVLEVTSRKQRIVHMEKEMAEL 161
>02_05_1262 +
35312313-35312343,35312840-35312886,35313614-35313660,
35313740-35313842,35313924-35314691
Length = 331
Score = 31.5 bits (68), Expect = 0.85
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +1
Query: 649 NEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFTEKVL 828
N MAI+ + ++ + EL+ E QLL E+N + + + S++ + E +EK++
Sbjct: 216 NLMAIIKNRKDVYTAELKELEKRRDQLLQEMNE-SSAAESLNSELAEVTSAIETVSEKII 274
>11_04_0471 -
18121023-18121213,18121954-18122080,18122221-18122253,
18122969-18123009,18123415-18123484,18123626-18123744,
18123876-18123942,18124735-18124809,18125023-18125050,
18125130-18125179,18125679-18125741,18125829-18125870,
18126000-18126078,18127233-18127368,18128013-18128517,
18129238-18129372
Length = 586
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 667 SDEGELTSEELQMFESENVQLLNELNSMTEEVKQIESK 780
S + +EEL+M + ENV LL +L E +Q E++
Sbjct: 276 SHDSSTITEELEMLKDENVNLLEKLGLAEERFRQSEAR 313
>02_01_0642 - 4803464-4805665,4806231-4806320
Length = 763
Score = 30.3 bits (65), Expect = 2.0
Identities = 51/233 (21%), Positives = 96/233 (41%), Gaps = 10/233 (4%)
Frame = +1
Query: 133 DKQRILRVKSKNAFMATAKDICSQITKLRDFLLEHRDKYL---SFFNNVTGDDMSDEER- 300
D R + SK AF ++ K I Q +++ + E + L SF N+ + + +
Sbjct: 330 DAVRSELIASKEAFSSSRKQIEDQAVQMQKQVQELSGQRLLLSSFNQNLEAARLEIQGKA 389
Query: 301 DQIDTGAQRIMNTCSHLLKEFRNDNRRTTVTPQTREYMDSVVDLIDAYLKAVCKVHSE-- 474
+++ R S LL+E V + RE ++ ++ KA+ + +E
Sbjct: 390 KELNAAQSRCHELESLLLQEKEKVESLEAVLTKERESLEEKTKEVELLQKALVQKENEHS 449
Query: 475 --LKAMRVKRALDMRKLSRLELPATKSSIPNPFTLDKVXXXXXXXXXXXXXXXXXLDLSE 648
LK + +K + + +R E+ KS + + + ++ E
Sbjct: 450 NSLKLVEIKESELLE--ARNEVQDMKSKVES-IQIAVQEKDSELSETQRRLAEVNSEVVE 506
Query: 649 NEMAIMSDEGELTSEELQMFESE-NVQLL-NELNSMTEEVKQIESKVLHIAEL 801
+ + S E +L ++ + E ++Q L N+L+SM Q ES V IAEL
Sbjct: 507 LKQLLDSKEDQLVQVRTELQDKEQHIQTLQNKLDSMKFSCSQAESVVQKIAEL 559
>04_01_0301 + 4016588-4016627,4016715-4018837
Length = 720
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +1
Query: 637 DLSENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFT 816
DL E+E ++ E +T ++ MFE+E +L EL +T E K+ +K A+ EI
Sbjct: 131 DLMESEKDMLRSEAMITKQKQIMFEAEIERLNMELVVLT-EAKKAAAKACE-AQNDEIMK 188
Query: 817 E 819
E
Sbjct: 189 E 189
>02_01_0267 -
1766071-1766261,1766368-1766569,1766719-1766814,
1767414-1767560,1767635-1767800,1767907-1767973,
1772850-1772949,1773029-1773099,1773199-1773382,
1773784-1773929,1774484-1774663,1774737-1774824,
1775634-1775838,1775945-1776081,1776529-1776612,
1776718-1776894,1777050-1777194,1777642-1777763,
1777846-1778091,1778571-1778789,1779016-1779094,
1779178-1779257,1779291-1779320
Length = 1053
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +1
Query: 634 LDLSENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVK 765
L+ + NE+A+M D SE + ++E V + ++ S +E+K
Sbjct: 127 LNDTRNELALMDDNRRKISERMSHADNEVVDVREKIRSFEKEIK 170
>08_01_0044 + 301981-302826,302972-303580
Length = 484
Score = 28.7 bits (61), Expect = 6.0
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Frame = +1
Query: 220 DFLLEHRDKYLSFFNNVTGD--DMSDEERDQ----IDTGAQRIMNTCSHLLKEFRNDNRR 381
D LL H+++Y +N+ DM + D +++ +M HLL + +++ RR
Sbjct: 261 DILLYHQEEYGFTRDNIKAILVDMFEAGTDTSYLVLESAMVELMRK-PHLLAKLKDEVRR 319
Query: 382 TTVTPQTREYMDSVVDLIDAYLKAVCK 462
Q D++VD++ YLKAV K
Sbjct: 320 VIPKGQEVVNEDNIVDMV--YLKAVIK 344
>03_05_0944 + 29046793-29046922,29048091-29048464,29048556-29048687,
29048829-29049210,29049370-29049513,29049593-29049777,
29049925-29050051,29050603-29050676,29051071-29051147,
29051256-29051292,29051453-29051619,29051800-29051983,
29052053-29052130,29052451-29052570,29052648-29052707,
29053057-29053179,29053848-29053941,29054019-29054197,
29054737-29055039,29055373-29055474,29055553-29055693,
29055831-29055995,29056168-29056344,29056432-29056554,
29057787-29057867,29057983-29058099,29058214-29058386,
29058846-29058923,29058994-29059141,29059755-29059877,
29060015-29060071,29060145-29060255,29060382-29060573,
29060690-29060863,29061263-29061373,29061462-29061531,
29061734-29061812,29061898-29062000,29062086-29062256,
29062348-29062470,29062548-29062661,29062935-29063041,
29063117-29063168,29063245-29063351,29063589-29063703,
29063819-29063929,29064016-29064153,29064230-29064352,
29064535-29064606,29064774-29064886,29066780-29067110,
29067199-29067381,29068669-29068863,29068943-29069110,
29069208-29069340,29069511-29069595,29069726-29069765
Length = 2591
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 122 GLCMPKALLRVLTVFMQALNNG 57
GLC+PKAL L +F Q L +G
Sbjct: 2160 GLCLPKALQPFLPIFQQGLISG 2181
>06_03_0232 - 18507872-18508792
Length = 306
Score = 28.3 bits (60), Expect = 7.9
Identities = 23/97 (23%), Positives = 42/97 (43%)
Frame = +1
Query: 31 TNPLKMDITPLFKACIKTVKTRNKAFGIHSPISEDKQRILRVKSKNAFMATAKDICSQIT 210
++P+K + +F C KT K K I ED++ + S ++ D
Sbjct: 175 SSPIKKALQAIFCMCAKTAKKVKK---IERRQKEDRREASKEVSDDSEDEVYVDPLEAYE 231
Query: 211 KLRDFLLEHRDKYLSFFNNVTGDDMSDEERDQIDTGA 321
R+ E Y + ++ + DD +D++ D+ DT A
Sbjct: 232 AARNVAGEGPSTYFNEESSHSDDDDNDDDGDEGDTEA 268
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,329,791
Number of Sequences: 37544
Number of extensions: 269506
Number of successful extensions: 758
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2291695380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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