Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_A10
(831 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 33 0.33
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 33 0.33
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 33 0.33
U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical pr... 32 0.58
U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z50872-1|CAA90754.2| 1052|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical pr... 30 1.8
L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome cond... 30 1.8
Z66511-3|CAC42276.1| 712|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z66511-2|CAA91315.1| 725|Caenorhabditis elegans Hypothetical pr... 29 3.1
X59156-1|CAA41870.1| 77|Caenorhabditis elegans transposase pro... 29 3.1
U23510-12|AAK71391.2| 212|Caenorhabditis elegans Hypothetical p... 29 3.1
Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 29 4.1
U23525-9|ABC71820.1| 766|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z81554-3|CAB04505.1| 255|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 28 7.1
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 28 7.1
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 28 7.1
Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical p... 28 9.4
Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical pr... 28 9.4
U41543-11|AAP40530.1| 362|Caenorhabditis elegans Hypothetical p... 28 9.4
U41543-10|AAP40531.1| 374|Caenorhabditis elegans Hypothetical p... 28 9.4
U41543-9|AAB37021.2| 453|Caenorhabditis elegans Hypothetical pr... 28 9.4
AF099925-12|AAC69509.1| 257|Caenorhabditis elegans Hypothetical... 28 9.4
AC006723-3|AAF59427.1| 881|Caenorhabditis elegans Hypothetical ... 28 9.4
AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like ... 28 9.4
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = +1
Query: 646 ENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFTEKV 825
ENE+ D TS E Q+ + + + NELN +Q+E+++L++ + ++V
Sbjct: 1876 ENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRV 1935
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = +1
Query: 646 ENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFTEKV 825
ENE+ D TS E Q+ + + + NELN +Q+E+++L++ + ++V
Sbjct: 1949 ENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRV 2008
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = +1
Query: 646 ENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQEIFTEKV 825
ENE+ D TS E Q+ + + + NELN +Q+E+++L++ + ++V
Sbjct: 1949 ENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRV 2008
>U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical
protein C18H9.8 protein.
Length = 674
Score = 31.9 bits (69), Expect = 0.58
Identities = 39/176 (22%), Positives = 63/176 (35%), Gaps = 1/176 (0%)
Frame = +1
Query: 226 LLEHRDKYLSFFNNVTG-DDMSDEERDQIDTGAQRIMNTCSHLLKEFRNDNRRTTVTPQT 402
++ H KYL + T DD ++ QI Q I ++ R + + +
Sbjct: 441 IMAHHTKYLDLLSKSTMLDDTTENYPQQIVIYQQDIEEFSDAVVLILR----KISANLKK 496
Query: 403 REYMDSVVDLIDAYLKAVCKVHSELKAMRVKRALDMRKLSRLELPATKSSIPNPFTLDKV 582
D + DL + L ELK M V+ ++ + +EL A I N T +K
Sbjct: 497 VNLEDQITDLDERGLTLQTGNVDELKEMHVRLQEELISIEDMEL-ALNEEIDNLETEEKK 555
Query: 583 XXXXXXXXXXXXXXXXXLDLSENEMAIMSDEGELTSEELQMFESENVQLLNELNSM 750
E + DE S E+Q E+ + NEL+S+
Sbjct: 556 IDQELAGVGKNVDSDGLRQELEERQKRLEDEAPARSHEMQQLEANVASIRNELHSI 611
>U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical protein
F21C10.7 protein.
Length = 2541
Score = 31.1 bits (67), Expect = 1.0
Identities = 10/39 (25%), Positives = 27/39 (69%)
Frame = +1
Query: 691 EELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQE 807
EE+QM++ E ++++ ++ + V++ E+K+ + E+Q+
Sbjct: 1021 EEIQMWQEETIEIIQLVDKTPKTVQESETKIKKVNEIQQ 1059
>Z50872-1|CAA90754.2| 1052|Caenorhabditis elegans Hypothetical
protein C05D12.2 protein.
Length = 1052
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = +1
Query: 208 TKLRDFLLEHRDKYLSFFNNVTGDDMSDEE--RDQIDTGAQRIMNTCSHLLKEFRNDNRR 381
TK++ E+ D +SFFNN+T D D + I Q SH L D+
Sbjct: 153 TKIQKLFTENPDDVISFFNNMTLSDGDDTQPVLTAIQNAQQTYPKMKSHALVLVFTDSTS 212
Query: 382 TTVTPQTREYMD 417
+ T + + D
Sbjct: 213 SDATAWSHRFTD 224
>Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical
protein R13G10.1 protein.
Length = 1469
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 7/56 (12%)
Frame = +1
Query: 634 LDLSENE---MAIMSDEGELTSEEL----QMFESENVQLLNELNSMTEEVKQIESK 780
LD+SE+E M IM ++G+ +EL Q +EN++ ELN++T E++ + K
Sbjct: 508 LDVSESELKDMTIMMEQGQKRVDELKGTLQTMMAENIRDNTELNAVTTELQDRKLK 563
>L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome
condensation protein protein.
Length = 1469
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 7/56 (12%)
Frame = +1
Query: 634 LDLSENE---MAIMSDEGELTSEEL----QMFESENVQLLNELNSMTEEVKQIESK 780
LD+SE+E M IM ++G+ +EL Q +EN++ ELN++T E++ + K
Sbjct: 508 LDVSESELKDMTIMMEQGQKRVDELKGTLQTMMAENIRDNTELNAVTTELQDRKLK 563
>Z66511-3|CAC42276.1| 712|Caenorhabditis elegans Hypothetical
protein F07A11.2b protein.
Length = 712
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +1
Query: 715 ENVQLLNELNSMTEEVKQIESKVLHIAELQEIFTEKVL 828
E + LN+L + EV Q++ KVL IA ++I+ EK L
Sbjct: 535 EIIDALNDLPELIREVLQLDEKVLDIA--KQIYKEKSL 570
>Z66511-2|CAA91315.1| 725|Caenorhabditis elegans Hypothetical
protein F07A11.2a protein.
Length = 725
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +1
Query: 715 ENVQLLNELNSMTEEVKQIESKVLHIAELQEIFTEKVL 828
E + LN+L + EV Q++ KVL IA ++I+ EK L
Sbjct: 548 EIIDALNDLPELIREVLQLDEKVLDIA--KQIYKEKSL 583
>X59156-1|CAA41870.1| 77|Caenorhabditis elegans transposase
protein.
Length = 77
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -1
Query: 819 FSEYFLKFCNV*YFAFNLFNFFCHTV*FI*QLYILRL 709
FS YFL F +F FN+F F V F+ ++ +L+L
Sbjct: 41 FSAYFLNFFQFIFFFFNIFQLF--YVVFLFEILVLKL 75
>U23510-12|AAK71391.2| 212|Caenorhabditis elegans Hypothetical
protein R12C12.7 protein.
Length = 212
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +1
Query: 646 ENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKVLH 789
E E S E E T EE ++FESENV+ +N +S+ + ++ + +H
Sbjct: 60 EEESYDDSKETEETEEEDEIFESENVE-MNVRDSLWRFLSDVDLRRMH 106
>Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical
protein F01G10.5 protein.
Length = 824
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +1
Query: 637 DLSENEMAIMSDEGELTSEELQMFESENVQLLNELNSMT--EEVKQIESKVLHIAELQEI 810
D SENE+A + + +EL+M +ENV L L +T + Q E+ L + +L+E+
Sbjct: 339 DASENELASFRQKEKELIDELRMATNENVDLEELLKGVTNGKAGLQFENNCL-VGKLEEL 397
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +1
Query: 634 LDLSENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQ 804
L+ S +E I+ + E +ELQ + L E+N +T + + E + I LQ
Sbjct: 458 LENSNSETEILKQKLETLDKELQARQQTEKALTEEINVLTTSLAEKEQQTAQIQNLQ 514
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +1
Query: 634 LDLSENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQIESKVLHIAELQ 804
L+ S +E I+ + E +ELQ + L E+N +T + + E + I LQ
Sbjct: 458 LENSNSETEILKQKLETLDKELQARQQTEKALTEEINVLTTSLAEKEQQTAQIQNLQ 514
>U23525-9|ABC71820.1| 766|Caenorhabditis elegans Hypothetical
protein K11G12.6b protein.
Length = 766
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = -2
Query: 209 VICEQISLAVAMKAFFDFTLNMRCLSSLIGLCMPKALLRVLTVFMQALNNGVISILRGFV 30
++CEQ + ++AF + +L +R S + +P +L + LNN ++IL F
Sbjct: 110 IVCEQ---HLCVRAFLNISLVVRAFSLFLLASLPSNSKELLYSRITKLNNFSLTILT-FC 165
Query: 29 YVLNVFFLQ 3
N FF Q
Sbjct: 166 PNFNTFFFQ 174
>Z81554-3|CAB04505.1| 255|Caenorhabditis elegans Hypothetical
protein F57G4.6 protein.
Length = 255
Score = 28.3 bits (60), Expect = 7.1
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = +1
Query: 286 SDEERDQIDTG-AQRIMNTCSHLLKEFRNDNRRTTVTPQTRE---YMDSVVDLIDAYLKA 453
S E+ + DT IM TC LLKE + +R+ V + + Y+ +++ID+ L
Sbjct: 171 STYEKYKKDTAECDEIMLTCVSLLKELKEGEKRSEVKKKYEDVVGYVVETLEVIDSNLIP 230
Query: 454 VCKVHSELK 480
+ K H LK
Sbjct: 231 LLK-HDILK 238
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 640 LSENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQI 771
+S+ I+S T EEL FE+E ++ + EL+ + VK +
Sbjct: 1563 MSDKISRILSVPSSFTEEELDDFEAEKMKGIRELDMIGHTVKML 1606
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 640 LSENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQI 771
+S+ I+S T EEL FE+E ++ + EL+ + VK +
Sbjct: 1569 MSDKISRILSVPSSFTEEELDDFEAEKMKGIRELDMIGHTVKML 1612
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 640 LSENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQI 771
+S+ I+S T EEL FE+E ++ + EL+ + VK +
Sbjct: 1569 MSDKISRILSVPSSFTEEELDDFEAEKMKGIRELDMIGHTVKML 1612
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 640 LSENEMAIMSDEGELTSEELQMFESENVQLLNELNSMTEEVKQI 771
+S+ I+S T EEL FE+E ++ + EL+ + VK +
Sbjct: 1569 MSDKISRILSVPSSFTEEELDDFEAEKMKGIRELDMIGHTVKML 1612
>Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical
protein F02E9.4b protein.
Length = 1507
Score = 27.9 bits (59), Expect = 9.4
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Frame = +1
Query: 124 ISEDKQRILRVKSKNAFMATAKDICSQ--ITKLRDFLLEHRDKYLSFF-NNVTG-DDMSD 291
+S D++R +++ A A ++ SQ I+K D +E D S ++V G DD D
Sbjct: 376 LSPDERRARAIEA-GAQAVGAIELGSQEGISKDEDRTIEDEDMDKSKEKDDVDGIDDEDD 434
Query: 292 EERDQIDTGAQRIMNTCSHLLKEFRNDNRR 381
EE D + +M +HL++E D+R+
Sbjct: 435 EESGIEDKNNEEMMEEDNHLIEEIICDDRK 464
>Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical
protein F02E9.4a protein.
Length = 1505
Score = 27.9 bits (59), Expect = 9.4
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Frame = +1
Query: 124 ISEDKQRILRVKSKNAFMATAKDICSQ--ITKLRDFLLEHRDKYLSFF-NNVTG-DDMSD 291
+S D++R +++ A A ++ SQ I+K D +E D S ++V G DD D
Sbjct: 376 LSPDERRARAIEA-GAQAVGAIELGSQEGISKDEDRTIEDEDMDKSKEKDDVDGIDDEDD 434
Query: 292 EERDQIDTGAQRIMNTCSHLLKEFRNDNRR 381
EE D + +M +HL++E D+R+
Sbjct: 435 EESGIEDKNNEEMMEEDNHLIEEIICDDRK 464
>Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical
protein M79.1c protein.
Length = 1209
Score = 27.9 bits (59), Expect = 9.4
Identities = 28/96 (29%), Positives = 39/96 (40%), Gaps = 3/96 (3%)
Frame = +1
Query: 241 DKYLSFFNNVTGDDMSDEERDQIDTGAQRIMNTCSHLLKEFRNDNRRTTVTPQTREYMDS 420
D +SFFN T ++ NT LLK N N R R D
Sbjct: 622 DDSVSFFNPSTTSKVTSFRAQGPPFPPPPQQNTKPKLLKSVLNSNARHASEEFERNEQDD 681
Query: 421 VVDLIDAYL-KAVCKVHSEL-KAMRVKRALD-MRKL 519
VV L + + KAV ++ + K R+ LD MR++
Sbjct: 682 VVPLAEKNVRKAVTRLGGTMPKGQRIDAYLDSMRRV 717
>Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical
protein M79.1b protein.
Length = 1214
Score = 27.9 bits (59), Expect = 9.4
Identities = 28/96 (29%), Positives = 39/96 (40%), Gaps = 3/96 (3%)
Frame = +1
Query: 241 DKYLSFFNNVTGDDMSDEERDQIDTGAQRIMNTCSHLLKEFRNDNRRTTVTPQTREYMDS 420
D +SFFN T ++ NT LLK N N R R D
Sbjct: 627 DDSVSFFNPSTTSKVTSFRAQGPPFPPPPQQNTKPKLLKSVLNSNARHASEEFERNEQDD 686
Query: 421 VVDLIDAYL-KAVCKVHSEL-KAMRVKRALD-MRKL 519
VV L + + KAV ++ + K R+ LD MR++
Sbjct: 687 VVPLAEKNVRKAVTRLGGTMPKGQRIDAYLDSMRRV 722
>Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical
protein M79.1a protein.
Length = 1224
Score = 27.9 bits (59), Expect = 9.4
Identities = 28/96 (29%), Positives = 39/96 (40%), Gaps = 3/96 (3%)
Frame = +1
Query: 241 DKYLSFFNNVTGDDMSDEERDQIDTGAQRIMNTCSHLLKEFRNDNRRTTVTPQTREYMDS 420
D +SFFN T ++ NT LLK N N R R D
Sbjct: 637 DDSVSFFNPSTTSKVTSFRAQGPPFPPPPQQNTKPKLLKSVLNSNARHASEEFERNEQDD 696
Query: 421 VVDLIDAYL-KAVCKVHSEL-KAMRVKRALD-MRKL 519
VV L + + KAV ++ + K R+ LD MR++
Sbjct: 697 VVPLAEKNVRKAVTRLGGTMPKGQRIDAYLDSMRRV 732
>U41543-11|AAP40530.1| 362|Caenorhabditis elegans Hypothetical
protein F46H5.2b protein.
Length = 362
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 253 SFFNNVTGDDMSDEERDQIDTGAQRIMNTCSHLLKEFRNDNRRTTVTPQTRE 408
SF NV D + R +D + +T S +K+FR +N+R T + E
Sbjct: 8 SFSTNVP--DSENSSRSSVD--GYNLKDTTSEKIKQFRENNKRKTSNSSSEE 55
>U41543-10|AAP40531.1| 374|Caenorhabditis elegans Hypothetical
protein F46H5.2c protein.
Length = 374
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 253 SFFNNVTGDDMSDEERDQIDTGAQRIMNTCSHLLKEFRNDNRRTTVTPQTRE 408
SF NV D + R +D + +T S +K+FR +N+R T + E
Sbjct: 99 SFSTNVP--DSENSSRSSVD--GYNLKDTTSEKIKQFRENNKRKTSNSSSEE 146
>U41543-9|AAB37021.2| 453|Caenorhabditis elegans Hypothetical
protein F46H5.2a protein.
Length = 453
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 253 SFFNNVTGDDMSDEERDQIDTGAQRIMNTCSHLLKEFRNDNRRTTVTPQTRE 408
SF NV D + R +D + +T S +K+FR +N+R T + E
Sbjct: 99 SFSTNVP--DSENSSRSSVD--GYNLKDTTSEKIKQFRENNKRKTSNSSSEE 146
>AF099925-12|AAC69509.1| 257|Caenorhabditis elegans Hypothetical
protein K01A2.10 protein.
Length = 257
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 12/55 (21%)
Frame = +1
Query: 694 ELQMFESENVQLL----NELNSMTEEVKQIESKVLH--------IAELQEIFTEK 822
++Q ++E +L NE+N + E+++ + K LH IAEL+++ TEK
Sbjct: 74 QIQFLQNETSNMLKSLHNEINRLGNELREEKRKTLHGDDDSADKIAELEKVITEK 128
>AC006723-3|AAF59427.1| 881|Caenorhabditis elegans Hypothetical
protein Y19D10B.4 protein.
Length = 881
Score = 27.9 bits (59), Expect = 9.4
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = +1
Query: 208 TKLRDFLLEHRDKYLSFFNNVT---GDDMSDEERDQIDTGAQRIMNTCSHLLKEFRNDNR 378
TK++ E+ D +SFFNN+T GDD + I Q +H L D+
Sbjct: 153 TKIQKLFTENPDDVISFFNNMTLFDGDD-TQPVLTAIQNAQQTYPKMQAHALVLVFTDSP 211
Query: 379 RTTVTPQTREYMD 417
+ T + + D
Sbjct: 212 ASDATAWSHRFTD 224
>AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like
protein KLP-12 protein.
Length = 1609
Score = 27.9 bits (59), Expect = 9.4
Identities = 23/94 (24%), Positives = 42/94 (44%)
Frame = +1
Query: 40 LKMDITPLFKACIKTVKTRNKAFGIHSPISEDKQRILRVKSKNAFMATAKDICSQITKLR 219
LK ++ L KA ++ +K N+ + KQ+ ++ + AF K Q K+R
Sbjct: 717 LKSEVVDLKKAKVELIKKMNE--------DKKKQKTQQLANARAFATKEKQTRLQANKIR 768
Query: 220 DFLLEHRDKYLSFFNNVTGDDMSDEERDQIDTGA 321
LE +DK F T +++ +++ D A
Sbjct: 769 T--LEMKDKQREQFLKKTTQEVNALRKEKADAAA 800
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,176,989
Number of Sequences: 27780
Number of extensions: 273029
Number of successful extensions: 915
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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