Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_A07
         (897 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    24   7.2  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   9.5  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   9.5  

>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = +1

Query: 157 YLKGKLGNVIRSVEIMGGLVLSA*YRRLRFLSICNYTVFRAAYCD 291
           ++ G + N++  + I+G +       R +  S  NY +   A CD
Sbjct: 84  WISGVVMNIVALIGILGNIFSMVILSRPQMRSSINYLLIGLARCD 128


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = -3

Query: 343 PVRP-LTVPYDQQLLTGRHHNTLL*TPY 263
           P+ P + +PY Q +L   HH  LL   Y
Sbjct: 165 PIHPAVLLPYPQHVLHPAHHPALLHPAY 192


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = -3

Query: 343 PVRP-LTVPYDQQLLTGRHHNTLL*TPY 263
           P+ P + +PY Q +L   HH  LL   Y
Sbjct: 165 PIHPAVLLPYPQHVLHPAHHPALLHPAY 192


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 953,796
Number of Sequences: 2352
Number of extensions: 21380
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96747534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)