Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_A06
         (811 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_03_0202 + 16359539-16359763,16360113-16360193,16361362-163616...    31   0.82 
04_03_0357 + 14852584-14853058,14853116-14855754                       29   4.4  

>02_03_0202 +
           16359539-16359763,16360113-16360193,16361362-16361600,
           16361828-16362029,16362108-16362188,16362272-16362455,
           16362625-16362791,16363020-16363802
          Length = 653

 Score = 31.5 bits (68), Expect = 0.82
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 544 DPAEIRRFMKSYGTHYIESFVTG 612
           DPA + RF+K+YGTH I     G
Sbjct: 176 DPAALSRFIKTYGTHIIVEMAVG 198


>04_03_0357 + 14852584-14853058,14853116-14855754
          Length = 1037

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +1

Query: 448 LTKKHRTVELEDLE-GIRVRAYIQRAIDKLDINDPAEIRRFMKSYGT 585
           L K H    LE L+ G R+ A  Q A+D ++ N P  +R   KS GT
Sbjct: 305 LMKAHEAA-LEALKPGNRMSAVYQAAVDVIEKNAPELLRNLTKSAGT 350


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,589,489
Number of Sequences: 37544
Number of extensions: 372857
Number of successful extensions: 834
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)