Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_A05
(583 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 66 3e-12
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 62 6e-11
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 62 8e-11
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 58 7e-10
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 56 3e-09
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 56 5e-09
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 44 2e-05
SPAC1952.05 |gcn5||histone acetyltransferase Gcn5|Schizosaccharo... 27 2.0
SPBC342.01c |alg6|SPBC3F6.06c|glucosyltransferase Alg6|Schizosac... 25 6.1
SPBC13G1.01c |nam9||mitochondrial ribosomal protein subunit S4|S... 25 6.1
SPBC16H5.13 |||WD repeat protein |Schizosaccharomyces pombe|chr ... 25 6.1
SPAP8A3.14c |||mitochondrial inner membrane protein |Schizosacch... 25 8.1
SPBC19F5.04 |||aspartate kinase |Schizosaccharomyces pombe|chr 2... 25 8.1
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 66.5 bits (155), Expect = 3e-12
Identities = 30/90 (33%), Positives = 51/90 (56%)
Frame = +1
Query: 163 IVKIQSTDDFKEKVINSKVPVVVDFFATWCNPCRLLTPRLESIIAESKGKVVLAKVDIDE 342
+ ++ + +FK V K+ VVVDFFATWC PC+ + P+ E + + KVD+D+
Sbjct: 2 VKQVSDSSEFKSIVCQDKL-VVVDFFATWCGPCKAIAPKFEQ-FSNTYSDATFIKVDVDQ 59
Query: 343 QTDLALDYEVSSVPVLVAIKNGKVQNRLVG 432
+++A + V ++P KNG+ +VG
Sbjct: 60 LSEIAAEAGVHAMPSFFLYKNGEKIEEIVG 89
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 62.1 bits (144), Expect = 6e-11
Identities = 31/107 (28%), Positives = 58/107 (54%)
Frame = +1
Query: 112 KNYGFLXNFSLTASKNDIVKIQSTDDFKEKVINSKVPVVVDFFATWCNPCRLLTPRLESI 291
+++ +F+ + + ++S D+ ++ KV VVDF+A WC PC+ L P LE
Sbjct: 2 RSFALRRSFTSSRILRKVNAVESFGDYNTRISADKV-TVVDFYADWCGPCKYLKPFLEK- 59
Query: 292 IAESKGKVVLAKVDIDEQTDLALDYEVSSVPVLVAIKNGKVQNRLVG 432
++E K V+ D+ +D+A V ++P +V + G+ +R+VG
Sbjct: 60 LSEQNQKASFIAVNADKFSDIAQKNGVYALPTMVLFRKGQELDRIVG 106
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 61.7 bits (143), Expect = 8e-11
Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Frame = +1
Query: 163 IVKIQSTDDFKEKVINSKVPVVVDFFATWCNPCRLLTPRLESI--IAESKGKVVLAKVDI 336
+V++QS ++ + + SK +++F+ATWC C+ L P E + + E V++ K+D
Sbjct: 22 VVELQSLNELENTIRASKKGALIEFYATWCGHCKSLAPVYEELGALFEDHNDVLIGKIDA 81
Query: 337 DEQTDLALDYEVSSVPVLVAI-KNGKVQNRLVGLQDTDKLRKWIEQFASEET 489
D +D+A Y ++ P L+ +G + +D D L QF SE+T
Sbjct: 82 DTHSDVADKYHITGFPTLIWFPPDGSEPVQYSNARDVDSL----TQFVSEKT 129
Score = 48.8 bits (111), Expect = 6e-07
Identities = 23/80 (28%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Frame = +1
Query: 157 NDIVKIQSTDDFKEKVINSKVPVVVDFFATWCNPCRLLTPRLESI--IAESKGKVVLAKV 330
+++V++ S + F + V++ K V+V+F+A WC C+ L P E++ + +++ V + K+
Sbjct: 140 SNVVELDSLN-FDKVVMDDKKDVLVEFYADWCGYCKRLAPTYETLGKVFKNEPNVEIVKI 198
Query: 331 DIDEQTDLALDYEVSSVPVL 390
+ D D+ +EV+S P +
Sbjct: 199 NADVFADIGRLHEVASFPTI 218
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 58.4 bits (135), Expect = 7e-10
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Frame = +1
Query: 199 KVINSKVPVVVDFFATWCNPCRLLTPRLESIIAE-SKGKVVLAKVDIDEQTDLALDYEVS 375
++I + ++V F+A WC C+ L P ES E K + L +VD E+ DL +Y +
Sbjct: 34 ELITADKVLMVKFYAPWCGHCKALAPEYESAADELEKDGISLVEVDCTEEGDLCSEYSIR 93
Query: 376 SVPVLVAIKNGKVQNRLVGLQDTDKLRKWIEQ 471
P L KNGK ++ G + D L K++ +
Sbjct: 94 GYPTLNVFKNGKQISQYSGPRKHDALVKYMRK 125
Score = 52.4 bits (120), Expect = 5e-08
Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 4/116 (3%)
Frame = +1
Query: 151 SKNDIVKIQSTDDFKEKVINSKVPVVVDFFATWCNPCRLLTPRLESIIAE--SKGKVVLA 324
S+ D+V + + D+F + V++ V+V+F+A WC C+ L P E + E VV+A
Sbjct: 353 SQEDLVVLVA-DNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEYSDDSNVVVA 411
Query: 325 KVDIDEQTDLALDYEVSSVPVLVAIK-NGKVQN-RLVGLQDTDKLRKWIEQFASEE 486
K+D E D+++ +S P ++ K N KV R G + + L +I++ AS E
Sbjct: 412 KIDATE-NDISV--SISGFPTIMFFKANDKVNPVRYEGDRTLEDLSAFIDKHASFE 464
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 56.4 bits (130), Expect = 3e-09
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Frame = +1
Query: 223 VVVDFFATWCNPCRLLTPRLESIIAE-SKGKVVLAKVDIDEQTDLALDYEVSSVPVLVAI 399
+ VD +A WC PC+ ++P + ++ + K V AKV++DEQ +A V ++P V
Sbjct: 22 LAVDCYADWCGPCKAISPLFSQLASKYASPKFVFAKVNVDEQRQIASGLGVKAMPTFVFF 81
Query: 400 KNGKVQNRLVGLQDTDKLRKWIEQFASEET 489
+NGK + L G + L++ + +S+ T
Sbjct: 82 ENGKQIDMLTG-ANPQALKEKVALISSKAT 110
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 55.6 bits (128), Expect = 5e-09
Identities = 29/104 (27%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Frame = +1
Query: 166 VKIQSTDDFKEKVINSKVPVVV-DFFATWCNPCRLLTPRLESIIAESKGKVVLAKVDIDE 342
V+I + F+E + N K +++ +F+A W PC+ + + ++K V L K++ ++
Sbjct: 3 VEITFVEQFQEILQNGKEQIILLNFYAPWAAPCKQMNQVFDQFAKDTKNAVFL-KIEAEK 61
Query: 343 QTDLALDYEVSSVPVLVAIKNGKVQNRLVGLQDTDKLRKWIEQF 474
+D+A ++V++VP+ V I KV R+ G + KL+ I+++
Sbjct: 62 FSDIAESFDVNAVPLFVLIHGAKVLARISG-ANPQKLKAAIDEY 104
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 44.0 bits (99), Expect = 2e-05
Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
Frame = +1
Query: 199 KVINSKVPVVVDFFATWCNPCRLLTPRLESIIAESKGKVVLAKVDIDEQTDLAL--DYEV 372
K + +K P +V F+A WC C+ L P + + + + + VD D + A+ Y+V
Sbjct: 43 KFVKAKGPSLVVFYAPWCGYCKKLVPTYQKLASNLHSLLPVTAVDCDADQNRAVCSQYQV 102
Query: 373 SSVPVLVAIKNGKVQNRLVGLQ-DTDKLRKWIEQFASEETKAEIK 504
P + + + L + D+ K +++F S+ +++K
Sbjct: 103 QGFPTIKLVYPSSKGSSLSSTDYNGDRSYKSLQKFVSDSIPSKVK 147
>SPAC1952.05 |gcn5||histone acetyltransferase
Gcn5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 454
Score = 27.1 bits (57), Expect = 2.0
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 5/38 (13%)
Frame = +1
Query: 346 TDLALDYEVSSV-----PVLVAIKNGKVQNRLVGLQDT 444
TDL +D+++SSV P ++ K+G +Q R+V DT
Sbjct: 91 TDLDVDFDISSVRVTEKPSVLEEKSGVIQFRVVSNDDT 128
>SPBC342.01c |alg6|SPBC3F6.06c|glucosyltransferase
Alg6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 506
Score = 25.4 bits (53), Expect = 6.1
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2
Query: 549 LVTKKNISFHFIKLSFY 499
+V KN+ F FI+LSFY
Sbjct: 427 VVFSKNVLFRFIQLSFY 443
>SPBC13G1.01c |nam9||mitochondrial ribosomal protein subunit
S4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 25.4 bits (53), Expect = 6.1
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 36 LHRALFLQNAYQKSY*LIHSKXYIKKK 116
+HRALF +A Q ++H K ++ K
Sbjct: 102 IHRALFASSALQARQLVLHGKVHVNGK 128
>SPBC16H5.13 |||WD repeat protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1026
Score = 25.4 bits (53), Expect = 6.1
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = +1
Query: 289 IIAESKGKVVLAKVDIDE-----QTDLALDYEVSSVPVLVAIKNGKVQNRLVGLQDTDKL 453
I+ + G+V++ V D QT +A + VSS+ L +G V ++ L ++ L
Sbjct: 32 IVGQCSGQVMVFDVSTDNHFTLIQTFIAHKHSVSSIVCLPFEADGIVDLSIITLDESGLL 91
Query: 454 RKWI 465
+W+
Sbjct: 92 CQWL 95
>SPAP8A3.14c |||mitochondrial inner membrane protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 677
Score = 25.0 bits (52), Expect = 8.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 106 LKKNYGFLXNFSLTASKNDIVKIQSTDDFKEKVI 207
L + GFL NFSL S + K+ S + E+ +
Sbjct: 584 LNASSGFLTNFSLKDSTDRFYKVLSYEKVSERFV 617
>SPBC19F5.04 |||aspartate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 519
Score = 25.0 bits (52), Expect = 8.1
Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = -3
Query: 410 FPFFIATKTGTELTS*SNAKSVCSSMSTFAK---TTLPLLSAIIDS-RRGVSSLHGL 252
FP IA E S VCS+ ST K TT L+ A + R V S+H L
Sbjct: 28 FPIKIAVDVAKEYLSTKRVALVCSARSTDTKAEGTTTRLIRATEAALRPAVGSVHDL 84
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,195,719
Number of Sequences: 5004
Number of extensions: 40398
Number of successful extensions: 134
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 130
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 250133048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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