Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_P23
         (735 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0330 - 16816497-16819952                                         30   2.2  
10_08_0333 - 16850267-16851802                                         28   6.7  

>10_08_0330 - 16816497-16819952
          Length = 1151

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 580  HKSALCSIMLNVECSNYSNASHNR 509
            + S LC + LN+ C+NY+ AS  R
Sbjct: 1058 NNSGLCGLPLNISCTNYALASDER 1081


>10_08_0333 - 16850267-16851802
          Length = 511

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -3

Query: 580 HKSALCSIMLNVECSNYSNASHNR 509
           H S LC   LN+ C+N S AS  R
Sbjct: 418 HNSGLCGPPLNISCTNASVASDER 441


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,626,481
Number of Sequences: 37544
Number of extensions: 236399
Number of successful extensions: 384
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 384
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)