Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_P17
         (478 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IKQ6 Cluster: Putative uncharacterized protein; n=2; ...    34   1.9  
UniRef50_Q98S55 Cluster: Putative uncharacterized protein orf161...    32   7.5  
UniRef50_A5CDZ1 Cluster: Putative glycosyl transferase, group 2;...    31   10.0 

>UniRef50_Q8IKQ6 Cluster: Putative uncharacterized protein; n=2;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium falciparum (isolate 3D7)
          Length = 3018

 Score = 33.9 bits (74), Expect = 1.9
 Identities = 19/55 (34%), Positives = 31/55 (56%)
 Frame = +2

Query: 182  EINKIKSINYNHYTMTKIILYKHA*STYLYIRLRKKSDMFNIVFLQDAFLLCTNY 346
            +IN +KS NY ++TM K I+Y+   +  +    +K   MFN ++  +  L CT Y
Sbjct: 2388 DIN-LKSFNYKNFTMNK-IMYEFLYNKDIIRIFKKNVHMFNEMYTCNLSLFCTTY 2440


>UniRef50_Q98S55 Cluster: Putative uncharacterized protein orf1613;
            n=1; Guillardia theta|Rep: Putative uncharacterized
            protein orf1613 - Guillardia theta (Cryptomonas phi)
          Length = 1613

 Score = 31.9 bits (69), Expect = 7.5
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
 Frame = +2

Query: 155  FIYK*LQCHEI--NKIKSINYNHYTMTKIILYKHA*STYLYIRLRKKSDMFNIVFLQDAF 328
            F+Y  +Q      + + S N N+ T+TK+   K + S ++ I+L K  D F+   L    
Sbjct: 1261 FLYLSIQMKSFFCSHLSSKNINNSTVTKVCKKKKSKSHFIRIKLNKIYDRFDKTILHTII 1320

Query: 329  LLCTNY 346
               TNY
Sbjct: 1321 YSVTNY 1326


>UniRef50_A5CDZ1 Cluster: Putative glycosyl transferase, group 2;
           n=1; Orientia tsutsugamushi Boryong|Rep: Putative
           glycosyl transferase, group 2 - Orientia tsutsugamushi
           (strain Boryong) (Rickettsia tsutsugamushi)
          Length = 583

 Score = 31.5 bits (68), Expect = 10.0
 Identities = 18/47 (38%), Positives = 27/47 (57%)
 Frame = +2

Query: 170 LQCHEINKIKSINYNHYTMTKIILYKHA*STYLYIRLRKKSDMFNIV 310
           L C +I++ K I  N+Y   KI L     STYL ++L  K D F+++
Sbjct: 79  LLCTDIDQNKIIVLNNYNPLKIKLIAQHFSTYL-VKLVSKQDFFSLI 124


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 415,623,104
Number of Sequences: 1657284
Number of extensions: 7029471
Number of successful extensions: 13163
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13162
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26870548160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)