Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_P14
         (643 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015271-1|AAT94500.1|  687|Drosophila melanogaster LD23193p pro...    54   1e-07
AE014134-2332|AAF53287.1|  687|Drosophila melanogaster CG12396-P...    54   1e-07
AE014134-3118|AAF53815.3| 1356|Drosophila melanogaster CG10186-P...    29   5.4  
AE014134-3117|AAN11047.1| 1676|Drosophila melanogaster CG10186-P...    29   5.4  
X77050-1|CAA54342.1|  260|Drosophila melanogaster gag-like polyp...    28   9.4  

>BT015271-1|AAT94500.1|  687|Drosophila melanogaster LD23193p
           protein.
          Length = 687

 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 22/54 (40%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
 Frame = -2

Query: 564 SPKKVKFVLKNNCMQKPVDYYKSVRQSPSIPFDSSKTPARTNLKPS-TPSPINP 406
           S K V+ V K+NC+    DYY+ ++ SP +P+D+++ P ++ LKP   P PI+P
Sbjct: 622 SGKHVRIVTKSNCIYPKSDYYRQLKLSPQVPYDANRLPGKSALKPHWIPGPIHP 675


>AE014134-2332|AAF53287.1|  687|Drosophila melanogaster CG12396-PA
           protein.
          Length = 687

 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 22/54 (40%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
 Frame = -2

Query: 564 SPKKVKFVLKNNCMQKPVDYYKSVRQSPSIPFDSSKTPARTNLKPS-TPSPINP 406
           S K V+ V K+NC+    DYY+ ++ SP +P+D+++ P ++ LKP   P PI+P
Sbjct: 622 SGKHVRIVTKSNCIYPKSDYYRQLKLSPQVPYDANRLPGKSALKPHWIPGPIHP 675


>AE014134-3118|AAF53815.3| 1356|Drosophila melanogaster CG10186-PC,
            isoform C protein.
          Length = 1356

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = -2

Query: 564  SPKKVKFVLKNNCMQKPVDYYKSVRQSPSIPFDSSKTPARTNLKPSTPSP 415
            S   V+  L  N     +  +K +   PSIP +S    +R  L+ +TP+P
Sbjct: 1080 SSVSVRCELSTNANPIEMSCHKGILTPPSIPCESGLRKSREELEHATPTP 1129


>AE014134-3117|AAN11047.1| 1676|Drosophila melanogaster CG10186-PA,
            isoform A protein.
          Length = 1676

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = -2

Query: 564  SPKKVKFVLKNNCMQKPVDYYKSVRQSPSIPFDSSKTPARTNLKPSTPSP 415
            S   V+  L  N     +  +K +   PSIP +S    +R  L+ +TP+P
Sbjct: 1080 SSVSVRCELSTNANPIEMSCHKGILTPPSIPCESGLRKSREELEHATPTP 1129


>X77050-1|CAA54342.1|  260|Drosophila melanogaster gag-like
           polypeptide protein.
          Length = 260

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 18/71 (25%), Positives = 29/71 (40%)
 Frame = -2

Query: 618 TVLVNKVKKFNXTNDSIHSPKKVKFVLKNNCMQKPVDYYKSVRQSPSIPFDSSKTPARTN 439
           T +  ++KK+    + I  PKK + V KNN   +P+    +  Q     F       R+ 
Sbjct: 108 TAIQKRLKKWRRNTNKI--PKKGRTVSKNNVKPRPITKTSNPAQRHLENFQDKLRKERSE 165

Query: 438 LKPSTPSPINP 406
           +K   P    P
Sbjct: 166 VKDQEPEKGTP 176


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,978,183
Number of Sequences: 53049
Number of extensions: 508900
Number of successful extensions: 1476
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1474
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)