Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_P13
(403 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62847 Cluster: 40S ribosomal protein S24; n=212; Eukar... 178 4e-44
UniRef50_Q8LC83 Cluster: 40S ribosomal protein S24-2; n=6; Eukar... 140 9e-33
UniRef50_Q8MUB8 Cluster: 40S ribosomal protein S24; n=1; Clonorc... 132 2e-30
UniRef50_A3BCP7 Cluster: Putative uncharacterized protein; n=2; ... 124 7e-28
UniRef50_UPI0000498B4B Cluster: 40S ribosomal protein S24; n=3; ... 109 3e-23
UniRef50_Q8I3R6 Cluster: 40S ribosomal subunit protein S24, puta... 106 1e-22
UniRef50_Q5CPN5 Cluster: 40s ribosomal protein s24; n=6; Eukaryo... 105 3e-22
UniRef50_UPI000150A155 Cluster: Ribosomal protein S24e containin... 105 4e-22
UniRef50_Q00V00 Cluster: 40S ribosomal protein S24; n=1; Ostreoc... 99 2e-20
UniRef50_Q4Q1D2 Cluster: 40S ribosomal protein S24e; n=4; Leishm... 99 4e-20
UniRef50_A2F0H5 Cluster: 40S ribosomal protein S24; n=3; Trichom... 98 5e-20
UniRef50_A0BWM9 Cluster: Chromosome undetermined scaffold_132, w... 90 2e-17
UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillar... 77 1e-13
UniRef50_Q91834 Cluster: Fragment of Xenopus laevis ribosomal pr... 67 1e-10
UniRef50_Q9UY20 Cluster: 30S ribosomal protein S24e; n=4; Thermo... 63 2e-09
UniRef50_Q8SR06 Cluster: 40S RIBOSOMAL PROTEIN S24; n=1; Encepha... 62 5e-09
UniRef50_A3DMS7 Cluster: 30S ribosomal protein S24e; n=1; Staphy... 56 2e-07
UniRef50_A1RXC7 Cluster: 30S ribosomal protein S24e; n=1; Thermo... 55 5e-07
UniRef50_Q8ZV65 Cluster: 30S ribosomal protein S24e; n=4; Pyroba... 52 6e-06
UniRef50_Q8TVD8 Cluster: 30S ribosomal protein S24e; n=1; Methan... 50 2e-05
UniRef50_A4YIV8 Cluster: Ribosomal protein S24E-like protein; n=... 50 2e-05
UniRef50_O29151 Cluster: 30S ribosomal protein S24e; n=1; Archae... 49 4e-05
UniRef50_Q9YCY0 Cluster: 30S ribosomal protein S24e; n=2; Desulf... 48 5e-05
UniRef50_O26367 Cluster: 30S ribosomal protein S24e; n=3; Methan... 46 2e-04
UniRef50_A3H8R4 Cluster: 30S ribosomal protein S24e; n=1; Caldiv... 44 9e-04
UniRef50_Q74M50 Cluster: 30S ribosomal protein S24e; n=1; Nanoar... 44 0.001
UniRef50_Q975Q9 Cluster: 30S ribosomal protein S24e; n=3; Sulfol... 44 0.001
UniRef50_P34582 Cluster: Uncharacterized protein T26G10.3; n=1; ... 42 0.003
UniRef50_Q8PZ95 Cluster: 30S ribosomal protein S24e; n=5; Euryar... 40 0.014
UniRef50_Q6L0P8 Cluster: 30S ribosomal protein S24e; n=4; Thermo... 40 0.024
UniRef50_P19953 Cluster: 30S ribosomal protein S24e; n=6; Haloba... 39 0.042
UniRef50_A7I4V3 Cluster: SSU ribosomal protein S24E; n=1; Candid... 36 0.23
UniRef50_P54032 Cluster: 30S ribosomal protein S24e; n=1; Methan... 36 0.30
UniRef50_Q2FS46 Cluster: 30S ribosomal protein S24e; n=1; Methan... 36 0.40
UniRef50_A2SR72 Cluster: Ribosomal protein S24e; n=2; Methanomic... 34 1.2
UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10; Tym... 33 1.6
UniRef50_Q7QAG9 Cluster: ENSANGP00000021262; n=1; Anopheles gamb... 33 1.6
UniRef50_A7SJD3 Cluster: Predicted protein; n=1; Nematostella ve... 32 3.7
UniRef50_Q14QN3 Cluster: Hypothetical abc transporter permease c... 32 4.9
UniRef50_A4J793 Cluster: Flagellar hook-associated protein FlgK;... 32 4.9
UniRef50_Q6R7H7 Cluster: ORF47; n=1; Ostreid herpesvirus 1|Rep: ... 31 8.5
UniRef50_A1ZRP2 Cluster: Von Willebrand factor type A domain pro... 31 8.5
>UniRef50_P62847 Cluster: 40S ribosomal protein S24; n=212;
Eukaryota|Rep: 40S ribosomal protein S24 - Homo sapiens
(Human)
Length = 133
Score = 178 bits (433), Expect = 4e-44
Identities = 82/103 (79%), Positives = 90/103 (87%)
Frame = -3
Query: 311 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 132
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 131 FGGGKSTGFALXYDTLXLAKKFEPKHRXARHGLYEKKRPTRKQ 3
FGGGK+TGF + YD+L AKK EPKHR ARHGLYEKK+ +RKQ
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQ 106
>UniRef50_Q8LC83 Cluster: 40S ribosomal protein S24-2; n=6;
Eukaryota|Rep: 40S ribosomal protein S24-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 140 bits (339), Expect = 9e-33
Identities = 67/108 (62%), Positives = 83/108 (76%), Gaps = 1/108 (0%)
Frame = -3
Query: 323 MSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVF 147
M+E TIRTR FMTNRLLARKQ V DVLHPG+ VSK E++EKLA+MY+V P+ +F F
Sbjct: 1 MAEKAVTIRTRNFMTNRLLARKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFCF 60
Query: 146 GFKTNFGGGKSTGFALXYDTLXLAKKFEPKHRXARHGLYEKKRPTRKQ 3
F+T+FGGGKS+G+ L YDT+ AKKFEPK+R R+GL K +RKQ
Sbjct: 61 KFRTHFGGGKSSGYGLIYDTVENAKKFEPKYRLIRNGLDTKIEKSRKQ 108
>UniRef50_Q8MUB8 Cluster: 40S ribosomal protein S24; n=1; Clonorchis
sinensis|Rep: 40S ribosomal protein S24 - Clonorchis
sinensis
Length = 139
Score = 132 bits (320), Expect = 2e-30
Identities = 61/100 (61%), Positives = 78/100 (78%)
Frame = -3
Query: 302 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGG 123
IRTRKFM+NRLL R+QMV D+LHPG+ +S +IRE+LAK YK +PD+VF FGF+T+FGG
Sbjct: 7 IRTRKFMSNRLLFRRQMVVDILHPGRCVLSLKDIRERLAKTYKTSPDMVFAFGFRTHFGG 66
Query: 122 GKSTGFALXYDTLXLAKKFEPKHRXARHGLYEKKRPTRKQ 3
GKSTGFAL YD+L AKKFEP++R R + P R++
Sbjct: 67 GKSTGFALVYDSLDHAKKFEPRYRLIRVKWVAGRHPQRQK 106
>UniRef50_A3BCP7 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 124 bits (299), Expect = 7e-28
Identities = 57/89 (64%), Positives = 72/89 (80%), Gaps = 1/89 (1%)
Frame = -3
Query: 305 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVFGFKTNF 129
T+RTRKFMTNRLL+RKQ V +VLHPG+ VSK +++EKLAK+Y+V + +FVF F+T+F
Sbjct: 11 TLRTRKFMTNRLLSRKQFVLEVLHPGRANVSKADLKEKLAKLYEVKDSNCIFVFKFRTHF 70
Query: 128 GGGKSTGFALXYDTLXLAKKFEPKHRXAR 42
GGGKSTGF L YD L AKK+EPK+R R
Sbjct: 71 GGGKSTGFGLIYDNLDAAKKYEPKYRLIR 99
>UniRef50_UPI0000498B4B Cluster: 40S ribosomal protein S24; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S24 - Entamoeba histolytica HM-1:IMSS
Length = 140
Score = 109 bits (261), Expect = 3e-23
Identities = 55/101 (54%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Frame = -3
Query: 305 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTP-DVVFVFGFKTNF 129
TIRTR + N LL RKQ+V D+ HPG TEI+EKLAKMYKV + + GF T +
Sbjct: 9 TIRTRNLIVNPLLCRKQVVVDIYHPGIVQPKFTEIKEKLAKMYKVKDVQTIVLNGFVTKY 68
Query: 128 GGGKSTGFALXYDTLXLAKKFEPKHRXARHGLYEKKRPTRK 6
GGGK++GFAL YDTL KKF PKH+ R GL +K + RK
Sbjct: 69 GGGKTSGFALIYDTLSALKKFVPKHQLIRAGLDKKTKAPRK 109
>UniRef50_Q8I3R6 Cluster: 40S ribosomal subunit protein S24,
putative; n=1; Plasmodium falciparum 3D7|Rep: 40S
ribosomal subunit protein S24, putative - Plasmodium
falciparum (isolate 3D7)
Length = 133
Score = 106 bits (255), Expect = 1e-22
Identities = 48/96 (50%), Positives = 68/96 (70%), Gaps = 1/96 (1%)
Frame = -3
Query: 305 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVFGFKTNF 129
TIR +K+M+N LL RKQ ++LHP K +V+K E++E+LAKMYK+ + + +FGFKT F
Sbjct: 6 TIRVKKYMSNPLLRRKQFALEILHPNKGSVAKKEVKERLAKMYKLNNVNTIVLFGFKTLF 65
Query: 128 GGGKSTGFALXYDTLXLAKKFEPKHRXARHGLYEKK 21
GGG++ GF L Y + KKFE K+R R GL +K+
Sbjct: 66 GGGRTKGFGLIYKNVDAVKKFEKKYRLVREGLIDKE 101
>UniRef50_Q5CPN5 Cluster: 40s ribosomal protein s24; n=6;
Eukaryota|Rep: 40s ribosomal protein s24 -
Cryptosporidium parvum Iowa II
Length = 159
Score = 105 bits (252), Expect = 3e-22
Identities = 49/102 (48%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Frame = -3
Query: 305 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVFGFKTNF 129
T+R R+F+ N LLARKQ V DV+HP VSK++++ KLAK+YKV + + +FGFKT F
Sbjct: 33 TVRVRQFLNNPLLARKQFVVDVIHPSLGGVSKSDLKAKLAKLYKVQDANCIVLFGFKTAF 92
Query: 128 GGGKSTGFALXYDTLXLAKKFEPKHRXARHGLYEKKRPTRKQ 3
GGG+S+GF + Y+ + KKFE ++R R G+ EK T ++
Sbjct: 93 GGGRSSGFCVIYNNISALKKFEHRYRQVRMGIAEKVTATGRK 134
>UniRef50_UPI000150A155 Cluster: Ribosomal protein S24e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S24e containing protein - Tetrahymena
thermophila SB210
Length = 149
Score = 105 bits (251), Expect = 4e-22
Identities = 51/102 (50%), Positives = 66/102 (64%)
Frame = -3
Query: 311 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 132
T IRT+K + N LL+R+Q+ DVLHP PT SK +IRE+LAK KV V V+GF T
Sbjct: 2 TIVIRTKKILVNPLLSRRQLSLDVLHPDSPTASKEKIREELAKQLKVDARNVVVYGFSTQ 61
Query: 131 FGGGKSTGFALXYDTLXLAKKFEPKHRXARHGLYEKKRPTRK 6
+GGGKSTGFAL YD K+EP +R + + +K TR+
Sbjct: 62 YGGGKSTGFALVYDNQQYLLKYEPNYRLRKVKILGEKPNTRR 103
>UniRef50_Q00V00 Cluster: 40S ribosomal protein S24; n=1;
Ostreococcus tauri|Rep: 40S ribosomal protein S24 -
Ostreococcus tauri
Length = 134
Score = 99 bits (238), Expect = 2e-20
Identities = 57/113 (50%), Positives = 70/113 (61%), Gaps = 20/113 (17%)
Frame = -3
Query: 284 MTNRLLARKQMV-----------CDVLHPGKPTVSK--------TEIREKLAKMYKVTPD 162
MTNRLL R+Q V CDVLHPG+ VSK E++EK+AKMY V+ +
Sbjct: 1 MTNRLLQRRQFVRLTNVFHQSQICDVLHPGRANVSKVRYIRGAGAELQEKIAKMYNVSDE 60
Query: 161 -VVFVFGFKTNFGGGKSTGFALXYDTLXLAKKFEPKHRXARHGLYEKKRPTRK 6
V +FGF+T FGGGKSTGF L YD + KKFEPKHR R GL + + +RK
Sbjct: 61 KCVSIFGFRTAFGGGKSTGFGLIYDNIDAFKKFEPKHRLIRAGLKDAVQKSRK 113
>UniRef50_Q4Q1D2 Cluster: 40S ribosomal protein S24e; n=4;
Leishmania|Rep: 40S ribosomal protein S24e - Leishmania
major
Length = 137
Score = 98.7 bits (235), Expect = 4e-20
Identities = 54/111 (48%), Positives = 68/111 (61%), Gaps = 3/111 (2%)
Frame = -3
Query: 329 FKMSEGTATIRTRKFMTNRLLARKQMVCDVLHPGK-PTVSKTEIREKLAKMYKVTPDV-- 159
F+ + IRT +F N+LL RKQ + +V HP TV IR+KLA +YKV PD
Sbjct: 3 FQKKKAEVCIRTSQFKVNKLLNRKQFIVEVNHPHWCGTVPTQLIRKKLATLYKV-PDASQ 61
Query: 158 VFVFGFKTNFGGGKSTGFALXYDTLXLAKKFEPKHRXARHGLYEKKRPTRK 6
V +FGFKT FGGGK+TGF L YD L K+FEP +R R G + + P RK
Sbjct: 62 VSLFGFKTKFGGGKTTGFGLIYDDLASLKRFEPNYRKTRMGFGKARLPARK 112
>UniRef50_A2F0H5 Cluster: 40S ribosomal protein S24; n=3;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S24
- Trichomonas vaginalis G3
Length = 140
Score = 98.3 bits (234), Expect = 5e-20
Identities = 44/100 (44%), Positives = 64/100 (64%)
Frame = -3
Query: 305 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFG 126
++ RK++ N+LL RKQ V D+ H G ++ EI++++A K D+V +FG +T FG
Sbjct: 5 SVHIRKYIVNKLLDRKQFVIDMQHLGAKAPTRDEIKDEVASRLKANKDLVVIFGLETKFG 64
Query: 125 GGKSTGFALXYDTLXLAKKFEPKHRXARHGLYEKKRPTRK 6
GG +TGF YD+L KK EPKHR + GL EK + TR+
Sbjct: 65 GGHTTGFGFVYDSLDALKKTEPKHRLIKAGLAEKGKVTRR 104
>UniRef50_A0BWM9 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 182
Score = 89.8 bits (213), Expect = 2e-17
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Frame = -3
Query: 311 TATIRTRKFMTNRLLA-RKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKT 135
T ++TRK + + L R+Q+ ++LHP KPT S+ + ++LA YK V V+G +T
Sbjct: 34 TFIVKTRKVLLKQSLEIRRQLSVELLHPNKPTPSQESVVKELASKYKADERNVVVYGLRT 93
Query: 134 NFGGGKSTGFALXYDTLXLAKKFEPKHRXARHGLYEKKRPTRK 6
FGG ++TGFAL YDT KFEPK R R G+ K+ +RK
Sbjct: 94 TFGGNRTTGFALIYDTQQYLLKFEPKFRLRRRGIIPKRDGSRK 136
>UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillardia
theta|Rep: 40S ribosomal protein S24 - Guillardia theta
(Cryptomonas phi)
Length = 129
Score = 77.0 bits (181), Expect = 1e-13
Identities = 38/101 (37%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Frame = -3
Query: 302 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVT-PDVVFVFGFKTNFG 126
++T+KF N LL RKQ + + K +SK +R +L+K Y++ P ++F+FG K NFG
Sbjct: 10 LKTKKFKNNPLLKRKQFLLSIDRKKKFNISKEWLRIELSKYYRIKDPSLIFIFGLKNNFG 69
Query: 125 GGKSTGFALXYDTLXLAKKFEPKHRXARHGLYEKKRPTRKQ 3
G K + F Y L A+ EPKHR ++ L + + + KQ
Sbjct: 70 GFKCSAFVYIYYNLEAARVNEPKHRLIKNNLMKLELQSSKQ 110
>UniRef50_Q91834 Cluster: Fragment of Xenopus laevis ribosomal
protein S19; n=1; Xenopus laevis|Rep: Fragment of
Xenopus laevis ribosomal protein S19 - Xenopus laevis
(African clawed frog)
Length = 142
Score = 66.9 bits (156), Expect = 1e-10
Identities = 37/96 (38%), Positives = 59/96 (61%)
Frame = +3
Query: 24 LLVQAVAGXPVLGLELLGQXECVVXQSESS*FATSEVCLETEYEHYIGSNLVHFGELLTD 203
LL++ + G V L L + VV +++ FATS+V +T++++ I LVH +L +D
Sbjct: 37 LLIKPMLGKSVFRLILFCIVKRVVDHAKACSFATSKVSPKTKHKNNIWGCLVHLCQLFSD 96
Query: 204 LGLADSWFSWM*NIANHLLARQQSVGHEFASANSRC 311
L DS F+WM I +HLLA Q+SV H+ + ++S C
Sbjct: 97 FSLGDSSFAWMKYINDHLLALQKSVCHKLSCSDSHC 132
>UniRef50_Q9UY20 Cluster: 30S ribosomal protein S24e; n=4;
Thermococcaceae|Rep: 30S ribosomal protein S24e -
Pyrococcus abyssi
Length = 99
Score = 62.9 bits (146), Expect = 2e-09
Identities = 29/94 (30%), Positives = 51/94 (54%)
Frame = -3
Query: 302 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGG 123
I+ + N+L+ RK++ ++ HPG+PT S+ +++ KL M + P+ + ++ FG
Sbjct: 3 IKITEVKENKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDLNPETTVIQYIRSYFGS 62
Query: 122 GKSTGFALXYDTLXLAKKFEPKHRXARHGLYEKK 21
KS G+A Y EP++ R G+ EKK
Sbjct: 63 YKSKGYAKYYYDKDRMLYIEPEYILIRDGIIEKK 96
>UniRef50_Q8SR06 Cluster: 40S RIBOSOMAL PROTEIN S24; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S24
- Encephalitozoon cuniculi
Length = 126
Score = 61.7 bits (143), Expect = 5e-09
Identities = 30/79 (37%), Positives = 45/79 (56%)
Frame = -3
Query: 278 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 99
NRLL+RK++ HPG P SK EIREK++++Y+ D V V K +G ++T A
Sbjct: 8 NRLLSRKELDVVAYHPGMPIPSKEEIREKISELYQTKKDNVVVMDLKNRYGTHRTTLKAK 67
Query: 98 XYDTLXLAKKFEPKHRXAR 42
Y ++ + E KH A+
Sbjct: 68 IYSSIEVLSNIEKKHIVAK 86
>UniRef50_A3DMS7 Cluster: 30S ribosomal protein S24e; n=1;
Staphylothermus marinus F1|Rep: 30S ribosomal protein
S24e - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 118
Score = 56.4 bits (130), Expect = 2e-07
Identities = 34/96 (35%), Positives = 52/96 (54%)
Frame = -3
Query: 326 KMSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVF 147
K+ E T I K+ N L+ R+++V + H GK T S+ IR + AK+Y V + V+V
Sbjct: 6 KIGEFTGEIVVDKY--NPLVKRREVVIRIAHIGKSTPSRGLIRHETAKIYGVEVEKVYVR 63
Query: 146 GFKTNFGGGKSTGFALXYDTLXLAKKFEPKHRXARH 39
T +G G S YD++ AK+FEP + R+
Sbjct: 64 EINTEYGLGVSNATIHIYDSVERAKQFEPPYVIKRN 99
>UniRef50_A1RXC7 Cluster: 30S ribosomal protein S24e; n=1;
Thermofilum pendens Hrk 5|Rep: 30S ribosomal protein
S24e - Thermofilum pendens (strain Hrk 5)
Length = 106
Score = 55.2 bits (127), Expect = 5e-07
Identities = 27/102 (26%), Positives = 52/102 (50%)
Frame = -3
Query: 308 ATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNF 129
+++R + N+L+ R++++ ++ H G T S+ ++ E L M + V T +
Sbjct: 4 SSLRIIQEKVNKLVGRRELLVEIHHQGSGTPSRRDVAEALRNMLGTGGSAIVVRKLVTRY 63
Query: 128 GGGKSTGFALXYDTLXLAKKFEPKHRXARHGLYEKKRPTRKQ 3
G G S YD+ K FEPKH R+GL +++ +++
Sbjct: 64 GQGVSEALIHIYDSDVKMKMFEPKHILRRNGLIQEQEAKKQE 105
>UniRef50_Q8ZV65 Cluster: 30S ribosomal protein S24e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S24e -
Pyrobaculum aerophilum
Length = 121
Score = 51.6 bits (118), Expect = 6e-06
Identities = 26/80 (32%), Positives = 44/80 (55%)
Frame = -3
Query: 278 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 99
N+LLAR++++ + +H T ++ +RE +AK + VFV KT FG G+S
Sbjct: 14 NKLLARRELLVEAVHQNASTPTRQSVREWVAKQLGIDISNVFVRRIKTEFGRGRSLAEVH 73
Query: 98 XYDTLXLAKKFEPKHRXARH 39
Y+ +A+ EP + AR+
Sbjct: 74 VYNDSKIARVIEPLYILARN 93
>UniRef50_Q8TVD8 Cluster: 30S ribosomal protein S24e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S24e -
Methanopyrus kandleri
Length = 116
Score = 50.0 bits (114), Expect = 2e-05
Identities = 26/80 (32%), Positives = 42/80 (52%)
Frame = -3
Query: 278 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 99
N LL RK++ V H T K+E+ KLA + V +VV + ++ FG ++ G+A
Sbjct: 11 NPLLYRKEVKFVVRHEDSGTPQKSEVLRKLAAILDVDKEVVLIDRMESEFGKRETKGYAK 70
Query: 98 XYDTLXLAKKFEPKHRXARH 39
Y ++ + EP+H RH
Sbjct: 71 IYKSMEHLEDIEPEHMVERH 90
>UniRef50_A4YIV8 Cluster: Ribosomal protein S24E-like protein; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S24E-like protein - Metallosphaera sedula DSM 5348
Length = 113
Score = 49.6 bits (113), Expect = 2e-05
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = -3
Query: 278 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 99
N+++ RK++ V H G PT S+ +IR+ ++ D+V + T +G G S
Sbjct: 23 NKVIGRKEIKIKVYHIGSPTPSRADIRKAISSFIGAKEDLVVIRKINTGYGAGISEATIH 82
Query: 98 XYDTLXLAKKFEPKH 54
Y + KFEP H
Sbjct: 83 VYSEKDVLSKFEPAH 97
>UniRef50_O29151 Cluster: 30S ribosomal protein S24e; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S24e -
Archaeoglobus fulgidus
Length = 110
Score = 48.8 bits (111), Expect = 4e-05
Identities = 28/85 (32%), Positives = 46/85 (54%)
Frame = -3
Query: 278 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 99
N LL R+++ C + GK T S+ E+R K+A + P+ V V KT FG ++ +
Sbjct: 14 NPLLRRREVYCRLSFEGK-TPSRKEVRGKIAGLMNAEPERVVVDYIKTEFGKTEAKCYVK 72
Query: 98 XYDTLXLAKKFEPKHRXARHGLYEK 24
YDT+ +K E +H R+ + E+
Sbjct: 73 IYDTVEDLQKIEEEHIIERNKVEEQ 97
>UniRef50_Q9YCY0 Cluster: 30S ribosomal protein S24e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S24e -
Aeropyrum pernix
Length = 118
Score = 48.4 bits (110), Expect = 5e-05
Identities = 27/81 (33%), Positives = 44/81 (54%)
Frame = -3
Query: 278 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 99
N L+ R+++V + H KPT + +R+KLA++ V +++ KT +G G S
Sbjct: 28 NPLVKRREIVMILHHELKPTPMRIMLRQKLAEVLGVDIKRIYIRYIKTGYGAGLSKVRVH 87
Query: 98 XYDTLXLAKKFEPKHRXARHG 36
YD+ A FEPK+ R+G
Sbjct: 88 VYDSPERALSFEPKYIIERNG 108
>UniRef50_O26367 Cluster: 30S ribosomal protein S24e; n=3;
Methanobacteriaceae|Rep: 30S ribosomal protein S24e -
Methanobacterium thermoautotrophicum
Length = 100
Score = 46.4 bits (105), Expect = 2e-04
Identities = 23/75 (30%), Positives = 39/75 (52%)
Frame = -3
Query: 278 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 99
N LL RK++ + L+ G+ T E++ KL M D++ V FG ++TG+A
Sbjct: 11 NPLLNRKEIRFECLYEGESTPKVLEVKNKLVAMLDADKDLLVVDKIDQGFGEPRATGYAK 70
Query: 98 XYDTLXLAKKFEPKH 54
Y++ + EP+H
Sbjct: 71 IYESAEKLTEIEPEH 85
>UniRef50_A3H8R4 Cluster: 30S ribosomal protein S24e; n=1;
Caldivirga maquilingensis IC-167|Rep: 30S ribosomal
protein S24e - Caldivirga maquilingensis IC-167
Length = 155
Score = 44.4 bits (100), Expect = 9e-04
Identities = 27/92 (29%), Positives = 43/92 (46%)
Frame = -3
Query: 314 GTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKT 135
G ++ + N LL RK++ V H G PT + ++RE+LAK P++ +V T
Sbjct: 36 GKVQVKVIEQFNNPLLQRKEVKAIVYHVGLPTPQRLQLREELAKALGSNPELTYVTHVYT 95
Query: 134 NFGGGKSTGFALXYDTLXLAKKFEPKHRXARH 39
+G G S Y A+ EP + R+
Sbjct: 96 QYGVGVSRIEVHVYFDKNTAELVEPLYVRLRN 127
>UniRef50_Q74M50 Cluster: 30S ribosomal protein S24e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S24e -
Nanoarchaeum equitans
Length = 94
Score = 44.0 bits (99), Expect = 0.001
Identities = 24/82 (29%), Positives = 42/82 (51%)
Frame = -3
Query: 278 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 99
N+L R + + V HP + T ++ E +EK+A+M V + + + + +G S +A
Sbjct: 12 NKLFDRTEYIIQVEHPKEKTPTREEAKEKIAEMLNVDKNKLVIKKIVSKYGLPYSFIYAR 71
Query: 98 XYDTLXLAKKFEPKHRXARHGL 33
YD + AK+ E K R+ L
Sbjct: 72 VYDNIDTAKRVELKQILRRNNL 93
>UniRef50_Q975Q9 Cluster: 30S ribosomal protein S24e; n=3;
Sulfolobus|Rep: 30S ribosomal protein S24e - Sulfolobus
tokodaii
Length = 120
Score = 43.6 bits (98), Expect = 0.001
Identities = 26/95 (27%), Positives = 47/95 (49%)
Frame = -3
Query: 326 KMSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVF 147
K+SE I R + N ++ R+++ V H G T+S+ ++ + +A Y D+V +
Sbjct: 10 KISEKAEGIVERD-IKNNVIGRRELYIKVFHIGSGTISRKDMIKAIASSYGAQEDLVVIK 68
Query: 146 GFKTNFGGGKSTGFALXYDTLXLAKKFEPKHRXAR 42
T +G G S A Y+ ++FEP++ R
Sbjct: 69 KIHTLYGAGISYVRANIYNDKKTLQEFEPQYLIGR 103
>UniRef50_P34582 Cluster: Uncharacterized protein T26G10.3; n=1;
Caenorhabditis elegans|Rep: Uncharacterized protein
T26G10.3 - Caenorhabditis elegans
Length = 91
Score = 42.3 bits (95), Expect = 0.003
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = -3
Query: 254 MVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVV 156
MV +V+ PG+PT K +IREK+A Y + PD +
Sbjct: 1 MVAEVILPGRPTTLKADIREKIANFYNINPDTM 33
>UniRef50_Q8PZ95 Cluster: 30S ribosomal protein S24e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S24e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 101
Score = 40.3 bits (90), Expect = 0.014
Identities = 25/90 (27%), Positives = 46/90 (51%)
Frame = -3
Query: 302 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGG 123
I+ K N LL R+++ V + G T S+ ++R KLA M +++ + KT +G
Sbjct: 3 IKIIKDKKNPLLNRRELDFIVKYEGS-TPSRNDVRNKLAAMLNAPLELLVIQRIKTEYGM 61
Query: 122 GKSTGFALXYDTLXLAKKFEPKHRXARHGL 33
+S G+A Y+ K+ E ++ R+ +
Sbjct: 62 QESKGYAKLYEDADRMKQVEQEYVLKRNAV 91
>UniRef50_Q6L0P8 Cluster: 30S ribosomal protein S24e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S24e -
Picrophilus torridus
Length = 102
Score = 39.5 bits (88), Expect = 0.024
Identities = 25/86 (29%), Positives = 41/86 (47%)
Frame = -3
Query: 278 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 99
N+LL RK++ + T S+ +IR+ LA Y ++ V + G + G+A
Sbjct: 14 NKLLFRKEINYTIKFENDKTPSREDIRKLLANNYGSDESLIIVDKNRQETGKHEIKGYAK 73
Query: 98 XYDTLXLAKKFEPKHRXARHGLYEKK 21
YDT A +EP + R+ L K+
Sbjct: 74 IYDTKEHAMLYEPDYELFRNKLKVKE 99
>UniRef50_P19953 Cluster: 30S ribosomal protein S24e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S24e -
Haloarcula marismortui (Halobacterium marismortui)
Length = 102
Score = 38.7 bits (86), Expect = 0.042
Identities = 23/80 (28%), Positives = 37/80 (46%)
Frame = -3
Query: 278 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 99
N +L R + +V+H + T S+ +R+ LA + V + T FG K+ G+A
Sbjct: 11 NPMLHRTDVRFEVVHD-EATPSRLSVRDSLAATLNKDAEEVVIHKLDTKFGMRKTVGYAK 69
Query: 98 XYDTLXLAKKFEPKHRXARH 39
YD A+ E H R+
Sbjct: 70 VYDNPEYARDVEQDHMLERN 89
>UniRef50_A7I4V3 Cluster: SSU ribosomal protein S24E; n=1;
Candidatus Methanoregula boonei 6A8|Rep: SSU ribosomal
protein S24E - Methanoregula boonei (strain 6A8)
Length = 99
Score = 36.3 bits (80), Expect = 0.23
Identities = 24/79 (30%), Positives = 38/79 (48%)
Frame = -3
Query: 278 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 99
N LL+R+++ + + G T S+ +I KL + +V + K+NFG G A
Sbjct: 11 NELLSRREIAFTLTYDGA-TPSRLQIIGKLCALLNTKDPLVVLDSLKSNFGKMVIVGKAR 69
Query: 98 XYDTLXLAKKFEPKHRXAR 42
YD+ KK E + AR
Sbjct: 70 IYDSEDAKKKTEHPYLSAR 88
>UniRef50_P54032 Cluster: 30S ribosomal protein S24e; n=1;
Methanocaldococcus jannaschii|Rep: 30S ribosomal protein
S24e - Methanococcus jannaschii
Length = 101
Score = 35.9 bits (79), Expect = 0.30
Identities = 24/85 (28%), Positives = 41/85 (48%)
Frame = -3
Query: 278 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 99
N LL RK+ V H G PT + +++ KLA + D++ V G ++ G+A
Sbjct: 11 NPLLKRKEYRFIVDHDG-PTPTFKDVKLKLAAILNANKDLLIVEKIVEEAGMQRARGYAK 69
Query: 98 XYDTLXLAKKFEPKHRXARHGLYEK 24
YD + K E +H ++ + E+
Sbjct: 70 LYDNEEMLKLVEREHILRKNKIEEE 94
>UniRef50_Q2FS46 Cluster: 30S ribosomal protein S24e; n=1;
Methanospirillum hungatei JF-1|Rep: 30S ribosomal
protein S24e - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 112
Score = 35.5 bits (78), Expect = 0.40
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = -3
Query: 278 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 99
N LL RK++ + G T S+ + KLA M D + + FG + TG A
Sbjct: 11 NVLLNRKEIGFSITFTGA-TPSRKMVHAKLAAMLSAPKDQLVIGSLHNRFGLTEITGDAR 69
Query: 98 XYDTLXLAKKFEPKH 54
Y + KK EP++
Sbjct: 70 VYTSAEYLKKIEPEY 84
>UniRef50_A2SR72 Cluster: Ribosomal protein S24e; n=2;
Methanomicrobiales|Rep: Ribosomal protein S24e -
Methanocorpusculum labreanum (strain ATCC 43576 / DSM
4855 / Z)
Length = 97
Score = 33.9 bits (74), Expect = 1.2
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = -3
Query: 278 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 99
N LL+R ++ + G T ++++I K+A M + + + K FG TG A
Sbjct: 11 NELLSRNELAFTASYDGA-TPARSDIGAKIAAMQNTPVENLILSPLKGRFGTRAVTGVAR 69
Query: 98 XYDTLXLAKKFEPKHRXAR 42
YDT K E + AR
Sbjct: 70 IYDTPEALKATEREFLIAR 88
>UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10;
Tymoviridae|Rep: Replicase-associated protein -
Poinsettia mosaic virus
Length = 1987
Score = 33.5 bits (73), Expect = 1.6
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +3
Query: 171 NLVHFGELLTDLGLADSWFSWM*NIANHLLARQQSVGHEF-ASANSRCSFTHFELFSIIR 347
NL HF LLT + +SW ++ ++R Q+V E +SA S T F LFS++
Sbjct: 332 NLQHFS-LLTASNRPSNSYSWNGSLWQRFISRLQTVAAELKSSAIFTSSITTF-LFSLLF 389
Query: 348 RLHARVSAKTRHRPA 392
+ R SA +R P+
Sbjct: 390 QYFRRKSAASRSLPS 404
>UniRef50_Q7QAG9 Cluster: ENSANGP00000021262; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000021262 - Anopheles gambiae
str. PEST
Length = 1960
Score = 33.5 bits (73), Expect = 1.6
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = +1
Query: 112 VDLPPPKFVLKPNTNTTSGVTLYILASFSRISVLLTVGFPGCKTSQTICLRANNLLVMNL 291
V PP+ V KP TN + TL +L F+ + ++ G P K+++ + + N + +
Sbjct: 6 VSCTPPRAVAKPRTNESREPTLVLLGPFTPKATVVFEGVPVGKSARRLLIVRNTNKTL-V 64
Query: 292 RVRIVAVP 315
+V + VP
Sbjct: 65 QVNLTRVP 72
>UniRef50_A7SJD3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 353
Score = 32.3 bits (70), Expect = 3.7
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +3
Query: 159 YIGSNLVHFGELLTDLGLADSWFSWM*NIANHLLARQQSVGHEFASANS 305
+I N +F + DLG+A ++ + + +H L R Q+VGH FA S
Sbjct: 251 FIDFNDFYFSNRVVDLGIALAYIMMLPQVNSH-LTRPQAVGHMFAGYQS 298
>UniRef50_Q14QN3 Cluster: Hypothetical abc transporter permease
component transmembrane protein; n=1; Spiroplasma
citri|Rep: Hypothetical abc transporter permease
component transmembrane protein - Spiroplasma citri
Length = 1415
Score = 31.9 bits (69), Expect = 4.9
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = -3
Query: 269 LARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTG 108
L + +V D L+ GK +KT+I K A +Y + + +F F G S G
Sbjct: 783 LTKNSLVSDYLYNGKWLSTKTDISAKNAHLYAQQLNNMIIFNFMVGKGASLSIG 836
>UniRef50_A4J793 Cluster: Flagellar hook-associated protein FlgK;
n=1; Desulfotomaculum reducens MI-1|Rep: Flagellar
hook-associated protein FlgK - Desulfotomaculum reducens
MI-1
Length = 586
Score = 31.9 bits (69), Expect = 4.9
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = -2
Query: 309 SDYSHSQIHDQQIVGAQADGLRCFTSRKTNCQQDRDP*EARQNVQGYSRCSVRIRFQDKL 130
+D+ + + +QQ +G Q + LR S D + + Q GY C+ I QD++
Sbjct: 521 ADHHDNMLENQQAIGQQIEALRQSVS---GVSIDEELTKVIQYQYGYQACARMISMQDEM 577
Query: 129 RRWQINWIR 103
+ IN IR
Sbjct: 578 LDYLINRIR 586
>UniRef50_Q6R7H7 Cluster: ORF47; n=1; Ostreid herpesvirus 1|Rep:
ORF47 - Ostreid herpesvirus 1
Length = 1412
Score = 31.1 bits (67), Expect = 8.5
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -3
Query: 179 YKVTPDVVFVFGFKTNFGGGKSTGFALXYDTLXLAKKFEPKHRXARHG 36
YK+ P + F G T FG ST L Y L A K + KH G
Sbjct: 452 YKIRPPIYFTSGSDTQFGSISSTASPLSY-ILSPAIKSDEKHTMVWRG 498
>UniRef50_A1ZRP2 Cluster: Von Willebrand factor type A domain protein;
n=1; Microscilla marina ATCC 23134|Rep: Von Willebrand
factor type A domain protein - Microscilla marina ATCC
23134
Length = 1088
Score = 31.1 bits (67), Expect = 8.5
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 118 LPPPKFVLKPNTNTTSGVTLYILASFSRISVLLTVGFPGCKTSQ 249
LPPPK V+K +TN GV + + F+ +++L + G +S+
Sbjct: 885 LPPPKIVIKTDTN-YQGVNMTSMKGFAHNNLMLLLDVSGSMSSK 927
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 413,779,174
Number of Sequences: 1657284
Number of extensions: 7803645
Number of successful extensions: 21084
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 20587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21063
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17349842203
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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