Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_P11
(729 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 114 7e-26
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 99 3e-21
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 70 2e-12
Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical pr... 51 7e-07
U39848-2|AAT81211.1| 279|Caenorhabditis elegans Hypothetical pr... 40 0.001
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 38 0.010
U80440-2|AAK21469.1| 162|Caenorhabditis elegans Hypothetical pr... 33 0.28
AF078157-5|AAN84817.1| 379|Caenorhabditis elegans Hypothetical ... 30 1.9
Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z83105-10|CAB05484.1| 499|Caenorhabditis elegans Hypothetical p... 29 4.5
U12966-4|AAA20616.1| 365|Caenorhabditis elegans Carbonic anhydr... 28 5.9
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 114 bits (274), Expect = 7e-26
Identities = 66/195 (33%), Positives = 98/195 (50%), Gaps = 5/195 (2%)
Frame = -1
Query: 729 TXAHCTRRWDADELY-VRLGEYDLQRXNDSRSYNFKVVEKIQHPNFELSSYHNDIAILKL 553
T AHC + Y V +G++D + + + + +++I + +DIAIL++
Sbjct: 66 TAAHCFEEDERVSSYEVVVGDWDNNQTDGNEQIFY--LQRIHFYPLYKDIFSHDIAILEI 123
Query: 552 HRPAV-FNTYVWPICLPPADLDLT-NEIATVIGWGTQWYGGPHSNVLMEVSVPVWDHQKC 379
P + FN Y PICLP D T V GWG+ G ++ L +P+ + C
Sbjct: 124 PYPGIEFNEYAQPICLPSKDFVYTPGRQCVVSGWGSM--GLRYAERLQAALIPIINRFDC 181
Query: 378 VDA--FVDSVFTETVCAGGLEGGKDACQGDSGGPLMYQMSSGRWAVVGVVSWGLRCGEPN 205
V++ S+ CAG LEGG D+CQGDSGGP + G + + GV+SWG C +
Sbjct: 182 VNSSQIYSSMSRSAFCAGYLEGGIDSCQGDSGGPFACRREDGAFVLAGVISWGDGCAQKK 241
Query: 204 HPGLYARVDKYLDWI 160
PG+Y V YL WI
Sbjct: 242 QPGIYTMVAPYLSWI 256
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 99.1 bits (236), Expect = 3e-21
Identities = 60/158 (37%), Positives = 81/158 (51%), Gaps = 7/158 (4%)
Frame = -1
Query: 606 HPNFEL---SSYHNDIAILKLHRPAVFNTYVWPICLPPADLDLTNEIATVIGWGTQWYGG 436
HP + + SSY D AI+++H P +T PICLP + N + V GWG+ G
Sbjct: 133 HPWYNIGFPSSY--DFAIMRIHPPVNTSTTARPICLPSLPA-VENRLCVVTGWGSTIEGS 189
Query: 435 PHSN-VLMEVSVPVWDHQKC--VDAFVDSVFTETV-CAGGLEGGKDACQGDSGGPLMYQM 268
S L E+ VP+ C + ++ + ++ CAG G D+CQGDSGGPLM
Sbjct: 190 SLSAPTLREIHVPLLSTLFCSSLPNYIGRIHLPSMLCAGYSYGKIDSCQGDSGGPLMCAR 249
Query: 267 SSGRWAVVGVVSWGLRCGEPNHPGLYARVDKYLDWILL 154
G W + GVVSWG+ C P PG+Y V WI L
Sbjct: 250 D-GHWELTGVVSWGIGCARPGMPGVYGNVHSASTWINL 286
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 69.7 bits (163), Expect = 2e-12
Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 20/210 (9%)
Frame = -1
Query: 729 TXAHCTRRWDADELYVRLGEYDLQRXNDSRSYNFKVVEKIQHPNFELSSYHNDIAILKLH 550
T AHC A +L R Y ++ ++R +F V E H + + NDIA+L++
Sbjct: 78 TAAHC-----ALQLQTRSFVY-VREPKNNRERSFSVKEAYIHSGYNNQTADNDIALLRIS 131
Query: 549 RPAVFNTYVWPICLPPADLDLTNEI--ATVIGWGTQW----YGGP---HSNVLMEVSVPV 397
+ + P+CL D L + VIG+G G P +S L SVP+
Sbjct: 132 SD-LSKLGIKPVCLVHDDSKLLKQYKNGVVIGYGLTLGEDSSGEPKLINSQTLQSTSVPI 190
Query: 396 WDHQKCVDA--FVDSVFTET----VCAGGLEGGKDACQGDSGGPLMYQMSSGRWAVVGVV 235
CV F+ + + +CAG G GDSGGPL+ S+G + +G+
Sbjct: 191 ISDDDCVKTWRFLSLLSVKITGYQICAGAYLHG--TAPGDSGGPLLIHKSNGEYVQIGIT 248
Query: 234 SWGLR-----CGEPNHPGLYARVDKYLDWI 160
S+G + PG+Y R+ KY+ WI
Sbjct: 249 SYGADGLDGVIDQGKFPGVYTRISKYVPWI 278
>Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical
protein F31D4.6 protein.
Length = 292
Score = 51.2 bits (117), Expect = 7e-07
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Frame = -1
Query: 576 NDIAILKLHRPAVFNTYVWPICLPPADLDLTNEIATVIGWGTQWYGGPHSNVLMEVSVPV 397
+D AI+++ + F+ V PICLP ++ T +A V GWG + S L+ +P+
Sbjct: 143 HDWAIVEVEKRIHFSENVRPICLPRPNMYYTKSLA-VPGWGRIFN---ESGPLIH-EIPM 197
Query: 396 WDHQKCVDAFVDSVFTET---VCAGGLE----GGKDACQGDSGGPLMYQMSS-GRWAVVG 241
+ C + D + + +CA + C GDSGG L Y+ + GR ++
Sbjct: 198 RIDRDCKRPWSDRLPADADDFICATSMNVSNYSAPRTCHGDSGGGLEYRDDNYGRAFLIA 257
Query: 240 VVSWGLRCGEPNHPGLYARVDKYLDWI 160
+ S+G R N + RVD YL+ I
Sbjct: 258 ITSFGTRGCPSNMLARFTRVDMYLNLI 284
>U39848-2|AAT81211.1| 279|Caenorhabditis elegans Hypothetical
protein B0286.6 protein.
Length = 279
Score = 40.3 bits (90), Expect = 0.001
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 2/124 (1%)
Frame = -1
Query: 576 NDIAILKLHRPAVFNTYVWPICLPPA-DLDLTNEIATVIGWGTQWYGGPHSNVLMEVSVP 400
NDIA+ +L P F+ ++P CLP A + E G+ YG S+ ++E
Sbjct: 121 NDIAVFELEEPIEFSKDIFPACLPSAPKIPRIRE----TGYKLFGYGRDPSDSVLESGKL 176
Query: 399 VWDHQKCVDAFVDSVFTETVCAGGLEGGKDACQGDSG-GPLMYQMSSGRWAVVGVVSWGL 223
+ + D + C + G +C GDSG G + + +VGV+S G+
Sbjct: 177 KSLYSFVAECSDDFPYGGVYCTSAVNRGL-SCDGDSGSGVVRTSDTRNVQVLVGVLSAGM 235
Query: 222 RCGE 211
C E
Sbjct: 236 PCPE 239
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 37.5 bits (83), Expect = 0.010
Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 6/126 (4%)
Frame = -1
Query: 576 NDIAILKLHRPAVFNTYVWPICLP--PADLDLTNEIATVIGWGT---QWYGGPHSNVLME 412
NDI IL+L CLP P + T GWG+ + + ++
Sbjct: 176 NDIVILELESTIDDVEGANYACLPFLPEVNIQSGANVTSFGWGSDPGKGFDNAAFPMIQV 235
Query: 411 VSVPVWDHQKCVDAFVDSVFTETVCAGGLEGGKDACQGDSGGPLMYQMS-SGRWAVVGVV 235
+++ C + + S+ ++ C E K+ C GDSGG L + S S R ++ +V
Sbjct: 236 LTLATETLATCEENWGTSIPFDSFCTAE-EEDKNVCSGDSGGGLTFHQSDSAREFIIAIV 294
Query: 234 SWGLRC 217
S+G C
Sbjct: 295 SYGSDC 300
>U80440-2|AAK21469.1| 162|Caenorhabditis elegans Hypothetical
protein T21E12.3 protein.
Length = 162
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = -1
Query: 339 CAGGLEGGKDACQGDSGGPLMYQMSSGRWAVVGVVSWGLRC 217
C + + AC GDSGG ++ Q+ + R VVGV+ G+ C
Sbjct: 62 CTKSISKNQLACTGDSGGGVV-QLINDRVTVVGVIYEGVTC 101
>AF078157-5|AAN84817.1| 379|Caenorhabditis elegans Hypothetical
protein F25E5.7 protein.
Length = 379
Score = 29.9 bits (64), Expect = 1.9
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 1/119 (0%)
Frame = -1
Query: 570 IAILKLHRPAVFNTYVWPICLPPADLDLTNEIATVIGWGTQWYGGPHSNVLMEVSVPVWD 391
+ IL+L +P N +WP+C+ D L + + G G +S +
Sbjct: 166 VLILELKKPLELNPSIWPVCI-SNDPQLFDRSSDFSVSGIDAKGVLNSGLF--------- 215
Query: 390 HQKCVDAFVDSVFTETVCAGGLEGGKDACQGDSGGPLMYQMSSGRWAVVGV-VSWGLRC 217
K V+ V+ F+ CA ++ + C DSGG + + SG+ V+GV V+ + C
Sbjct: 216 --KPVNCSVEGPFS---CAEAVDNKQRMCAYDSGGSAISNV-SGQNTVLGVYVTGNMNC 268
>Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical
protein F15B9.5 protein.
Length = 297
Score = 29.1 bits (62), Expect = 3.4
Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 1/93 (1%)
Frame = -1
Query: 507 PPADLDLTNEIATVIGWGTQWYGGPHSNVLMEVSVPVWDHQKCVDAFVDSVFTET-VCAG 331
P L L + V GWG N + S V Q V+ V + + A
Sbjct: 150 PLTQLQLETSVCYVAGWGKT------ENKTAKYSDSV--RQMMVNLSVRRIGKRKYLIAK 201
Query: 330 GLEGGKDACQGDSGGPLMYQMSSGRWAVVGVVS 232
+ G AC GDSG P +Y +G+ +VG V+
Sbjct: 202 AVTGSSRACMGDSGSP-VYCFVNGKRILVGTVA 233
>Z83105-10|CAB05484.1| 499|Caenorhabditis elegans Hypothetical
protein F14H3.10 protein.
Length = 499
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = -1
Query: 207 NHPGLYARVDKYLDWILLN-SRF*XL-DRKATG-VNAXCPEVRYHASFINLN 61
NHPG+ + K L I N +R L DR T +NA E++ HAS +N+N
Sbjct: 326 NHPGIIQNIQKELLDITENGARDLTLKDRPNTPYLNATIAEIQRHASILNVN 377
>U12966-4|AAA20616.1| 365|Caenorhabditis elegans Carbonic anhydrase
protein 1 protein.
Length = 365
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 252 PNVHLTSGTLTGLRYRPDRHPFRL 323
P+V++TSG L G RYR R F +
Sbjct: 169 PSVNITSGPLYGYRYRVQRIDFHM 192
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,240,839
Number of Sequences: 27780
Number of extensions: 342207
Number of successful extensions: 873
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -