Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_P10
(576 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456852-1|CAG33133.1| 472|Homo sapiens SELENBP1 protein. 160 4e-39
BC032997-1|AAH32997.1| 408|Homo sapiens SELENBP1 protein protein. 160 4e-39
BC009084-1|AAH09084.1| 472|Homo sapiens selenium binding protei... 160 4e-39
AL391069-27|CAH70328.1| 472|Homo sapiens selenium binding prote... 160 4e-39
U29091-1|AAB02395.1| 472|Homo sapiens selenium-binding protein ... 155 1e-37
AY327596-1|AAP97025.1| 126|Homo sapiens mucin short variant SV7... 32 1.3
BC053631-1|AAH53631.1| 515|Homo sapiens metastasis associated 1... 30 5.1
BC004227-1|AAH04227.1| 515|Homo sapiens metastasis associated 1... 30 5.1
AK027304-1|BAB55028.1| 515|Homo sapiens protein ( Homo sapiens ... 30 5.1
AC098824-1|AAY14699.1| 218|Homo sapiens unknown protein. 30 5.1
>CR456852-1|CAG33133.1| 472|Homo sapiens SELENBP1 protein.
Length = 472
Score = 160 bits (388), Expect = 4e-39
Identities = 67/98 (68%), Positives = 84/98 (85%)
Frame = -1
Query: 573 PMTVKGKILQGGPQMLQLSLDGKRLYVSSSLYSPWDKQVYPKMAEEGGWLVKLDVDTVNG 394
P+ VKGK + GGPQM+QLSLDGKRLY+++SLYS WDKQ YP + EG ++++DVDTV G
Sbjct: 375 PLVVKGKRVAGGPQMIQLSLDGKRLYITTSLYSAWDKQFYPDLIREGSVMLQVDVDTVKG 434
Query: 393 GMKLDPDFLVDFGAEPDGPALPHEMRYPGGDCTSDIWL 280
G+KL+P+FLVDFG EP GPAL HE+RYPGGDC+SDIW+
Sbjct: 435 GLKLNPNFLVDFGKEPLGPALAHELRYPGGDCSSDIWI 472
>BC032997-1|AAH32997.1| 408|Homo sapiens SELENBP1 protein protein.
Length = 408
Score = 160 bits (388), Expect = 4e-39
Identities = 67/98 (68%), Positives = 84/98 (85%)
Frame = -1
Query: 573 PMTVKGKILQGGPQMLQLSLDGKRLYVSSSLYSPWDKQVYPKMAEEGGWLVKLDVDTVNG 394
P+ VKGK + GGPQM+QLSLDGKRLY+++SLYS WDKQ YP + EG ++++DVDTV G
Sbjct: 311 PLVVKGKRVAGGPQMIQLSLDGKRLYITTSLYSAWDKQFYPDLIREGSVMLQVDVDTVKG 370
Query: 393 GMKLDPDFLVDFGAEPDGPALPHEMRYPGGDCTSDIWL 280
G+KL+P+FLVDFG EP GPAL HE+RYPGGDC+SDIW+
Sbjct: 371 GLKLNPNFLVDFGKEPLGPALAHELRYPGGDCSSDIWI 408
>BC009084-1|AAH09084.1| 472|Homo sapiens selenium binding protein 1
protein.
Length = 472
Score = 160 bits (388), Expect = 4e-39
Identities = 67/98 (68%), Positives = 84/98 (85%)
Frame = -1
Query: 573 PMTVKGKILQGGPQMLQLSLDGKRLYVSSSLYSPWDKQVYPKMAEEGGWLVKLDVDTVNG 394
P+ VKGK + GGPQM+QLSLDGKRLY+++SLYS WDKQ YP + EG ++++DVDTV G
Sbjct: 375 PLVVKGKRVAGGPQMIQLSLDGKRLYITTSLYSAWDKQFYPDLIREGSVMLQVDVDTVKG 434
Query: 393 GMKLDPDFLVDFGAEPDGPALPHEMRYPGGDCTSDIWL 280
G+KL+P+FLVDFG EP GPAL HE+RYPGGDC+SDIW+
Sbjct: 435 GLKLNPNFLVDFGKEPLGPALAHELRYPGGDCSSDIWI 472
>AL391069-27|CAH70328.1| 472|Homo sapiens selenium binding protein
1 protein.
Length = 472
Score = 160 bits (388), Expect = 4e-39
Identities = 67/98 (68%), Positives = 84/98 (85%)
Frame = -1
Query: 573 PMTVKGKILQGGPQMLQLSLDGKRLYVSSSLYSPWDKQVYPKMAEEGGWLVKLDVDTVNG 394
P+ VKGK + GGPQM+QLSLDGKRLY+++SLYS WDKQ YP + EG ++++DVDTV G
Sbjct: 375 PLVVKGKRVAGGPQMIQLSLDGKRLYITTSLYSAWDKQFYPDLIREGSVMLQVDVDTVKG 434
Query: 393 GMKLDPDFLVDFGAEPDGPALPHEMRYPGGDCTSDIWL 280
G+KL+P+FLVDFG EP GPAL HE+RYPGGDC+SDIW+
Sbjct: 435 GLKLNPNFLVDFGKEPLGPALAHELRYPGGDCSSDIWI 472
>U29091-1|AAB02395.1| 472|Homo sapiens selenium-binding protein
protein.
Length = 472
Score = 155 bits (376), Expect = 1e-37
Identities = 65/98 (66%), Positives = 83/98 (84%)
Frame = -1
Query: 573 PMTVKGKILQGGPQMLQLSLDGKRLYVSSSLYSPWDKQVYPKMAEEGGWLVKLDVDTVNG 394
P+ VKGK + GGPQM+QLSLDGKRLY+++SLYS W+KQ YP + EG ++++DVDTV G
Sbjct: 375 PLVVKGKRVAGGPQMIQLSLDGKRLYITTSLYSAWEKQFYPDLIREGSVMLQVDVDTVKG 434
Query: 393 GMKLDPDFLVDFGAEPDGPALPHEMRYPGGDCTSDIWL 280
G+KL+P+ LVDFG EP GPAL HE+RYPGGDC+SDIW+
Sbjct: 435 GLKLNPNCLVDFGKEPLGPALAHELRYPGGDCSSDIWI 472
>AY327596-1|AAP97025.1| 126|Homo sapiens mucin short variant SV7
protein.
Length = 126
Score = 32.3 bits (70), Expect = 1.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 375 PDPTSCLHSQYPRLTLLTTHPLQPF*GKLVYPKVSIATMRH 497
P P LHSQ+P TL+ PL +L+ ++IA +H
Sbjct: 75 PQPARALHSQFPATTLILLPPLPAIAPRLMPVALTIARSQH 115
>BC053631-1|AAH53631.1| 515|Homo sapiens metastasis associated 1
family, member 3 protein.
Length = 515
Score = 30.3 bits (65), Expect = 5.1
Identities = 20/69 (28%), Positives = 28/69 (40%)
Frame = +2
Query: 341 PSGSAPKSTRKSGSNFMPPFTVSTSNFTNHPPSSAILG*TCLSQGEYSDDETYKRFPSND 520
P+ S P + S SN P V+ + T P + +LG C S + Y P N
Sbjct: 340 PTYSKPNPNQISTSNGKPG-AVNGAVGTTFQPQNPLLGRACESCYATQSHQWYSWGPPNM 398
Query: 521 SCNICGPPW 547
C +C W
Sbjct: 399 QCRLCAICW 407
>BC004227-1|AAH04227.1| 515|Homo sapiens metastasis associated 1
family, member 3 protein.
Length = 515
Score = 30.3 bits (65), Expect = 5.1
Identities = 20/69 (28%), Positives = 28/69 (40%)
Frame = +2
Query: 341 PSGSAPKSTRKSGSNFMPPFTVSTSNFTNHPPSSAILG*TCLSQGEYSDDETYKRFPSND 520
P+ S P + S SN P V+ + T P + +LG C S + Y P N
Sbjct: 340 PTYSKPNPNQISTSNGKPG-AVNGAVGTTFQPQNPLLGRACESCYATQSHQWYSWGPPNM 398
Query: 521 SCNICGPPW 547
C +C W
Sbjct: 399 QCRLCAICW 407
>AK027304-1|BAB55028.1| 515|Homo sapiens protein ( Homo sapiens
cDNA FLJ14398 fis, clone HEMBA1003569, moderately
similar to METASTASIS-ASSOCIATED PROTEIN MTA1. ).
Length = 515
Score = 30.3 bits (65), Expect = 5.1
Identities = 20/69 (28%), Positives = 28/69 (40%)
Frame = +2
Query: 341 PSGSAPKSTRKSGSNFMPPFTVSTSNFTNHPPSSAILG*TCLSQGEYSDDETYKRFPSND 520
P+ S P + S SN P V+ + T P + +LG C S + Y P N
Sbjct: 340 PTYSKPNPNQISTSNGKPG-AVNGAVGTTFQPQNPLLGRACESCYATQSHQWYSWGPPNM 398
Query: 521 SCNICGPPW 547
C +C W
Sbjct: 399 QCRLCAICW 407
>AC098824-1|AAY14699.1| 218|Homo sapiens unknown protein.
Length = 218
Score = 30.3 bits (65), Expect = 5.1
Identities = 20/69 (28%), Positives = 28/69 (40%)
Frame = +2
Query: 341 PSGSAPKSTRKSGSNFMPPFTVSTSNFTNHPPSSAILG*TCLSQGEYSDDETYKRFPSND 520
P+ S P + S SN P V+ + T P + +LG C S + Y P N
Sbjct: 43 PTYSKPNPNQISTSNGKPG-AVNGAVGTTFQPQNPLLGRACESCYATQSHQWYSWGPPNM 101
Query: 521 SCNICGPPW 547
C +C W
Sbjct: 102 QCRLCAICW 110
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,611,001
Number of Sequences: 237096
Number of extensions: 2060681
Number of successful extensions: 3624
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3624
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -