Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_P10
(576 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL023835-5|CAA19490.1| 471|Caenorhabditis elegans Hypothetical ... 135 2e-32
Z77668-1|CAB01239.1| 576|Caenorhabditis elegans Hypothetical pr... 68 4e-12
AF038618-2|AAB92072.1| 487|Caenorhabditis elegans Hypothetical ... 67 1e-11
AF016686-12|AAB66234.1| 723|Caenorhabditis elegans Hypothetical... 30 1.0
Z70287-2|CAA94298.2| 700|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z77668-3|CAI46576.1| 284|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z77655-9|CAI46567.1| 284|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z70287-10|CAA94299.2| 339|Caenorhabditis elegans Hypothetical p... 28 5.5
U88310-2|AAB42338.2| 635|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z92785-4|CAB07201.2| 352|Caenorhabditis elegans Hypothetical pr... 27 9.5
>AL023835-5|CAA19490.1| 471|Caenorhabditis elegans Hypothetical
protein Y37A1B.5 protein.
Length = 471
Score = 135 bits (327), Expect = 2e-32
Identities = 57/95 (60%), Positives = 75/95 (78%)
Frame = -1
Query: 564 VKGKILQGGPQMLQLSLDGKRLYVSSSLYSPWDKQVYPKMAEEGGWLVKLDVDTVNGGMK 385
VKG+ ++GGPQMLQLSLDGKRLYV++SLY WD Q YP+ + G +V++++D +G M+
Sbjct: 377 VKGRKIEGGPQMLQLSLDGKRLYVTTSLYKKWDDQFYPEHVKSGATMVQVNIDPESGKME 436
Query: 384 LDPDFLVDFGAEPDGPALPHEMRYPGGDCTSDIWL 280
++ DFL+DFG GP L HEMRYPGGDCTSDIW+
Sbjct: 437 INRDFLIDFGKIEGGPYLAHEMRYPGGDCTSDIWI 471
>Z77668-1|CAB01239.1| 576|Caenorhabditis elegans Hypothetical
protein R11G10.2 protein.
Length = 576
Score = 68.1 bits (159), Expect = 4e-12
Identities = 29/67 (43%), Positives = 46/67 (68%)
Frame = -1
Query: 561 KGKILQGGPQMLQLSLDGKRLYVSSSLYSPWDKQVYPKMAEEGGWLVKLDVDTVNGGMKL 382
+G +GGP ++QLS DG RLYV +S Y WD Q YP++ +GG ++++D+ V+ M+L
Sbjct: 451 RGTKFRGGPALMQLSKDGCRLYVCNSFYKAWDAQFYPELISDGGQMIRVDI--VDDEMQL 508
Query: 381 DPDFLVD 361
+ FL+D
Sbjct: 509 NEKFLID 515
>AF038618-2|AAB92072.1| 487|Caenorhabditis elegans Hypothetical
protein F42G8.8 protein.
Length = 487
Score = 66.9 bits (156), Expect = 1e-11
Identities = 28/39 (71%), Positives = 34/39 (87%)
Frame = -1
Query: 564 VKGKILQGGPQMLQLSLDGKRLYVSSSLYSPWDKQVYPK 448
VKG+ ++GGPQMLQLSLDGKRLYV++SLY WD Q YP+
Sbjct: 446 VKGRKIEGGPQMLQLSLDGKRLYVTTSLYKKWDDQFYPE 484
>AF016686-12|AAB66234.1| 723|Caenorhabditis elegans Hypothetical
protein R07C3.4 protein.
Length = 723
Score = 30.3 bits (65), Expect = 1.0
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = -2
Query: 251 WLIIGFILHNIIKTKSAIYDNVVCPYFWTFINVCKITLAFI 129
W++ +HN IYDN+ N+C+I L F+
Sbjct: 150 WVLSDMAIHNFSNVSVPIYDNIPNEDMHYITNLCEIPLMFV 190
>Z70287-2|CAA94298.2| 700|Caenorhabditis elegans Hypothetical
protein R09E10.3 protein.
Length = 700
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = -2
Query: 251 WLIIGFILHNIIKTKSAIYDNVVCPYFWTFINVCKITLAFI 129
W++ +HN +YD + N+C+I+L F+
Sbjct: 154 WILSEMAIHNFSNVSVPLYDTITNDDMHYITNLCEISLMFV 194
>Z77668-3|CAI46576.1| 284|Caenorhabditis elegans Hypothetical
protein R11G10.3 protein.
Length = 284
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 459 LVYPKVSIATMRHTSVFHPMIVATF 533
L+Y V+ +RH +VFHP+ V +F
Sbjct: 32 LIYIVVASLFIRHPNVFHPLFVISF 56
>Z77655-9|CAI46567.1| 284|Caenorhabditis elegans Hypothetical
protein R11G10.3 protein.
Length = 284
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 459 LVYPKVSIATMRHTSVFHPMIVATF 533
L+Y V+ +RH +VFHP+ V +F
Sbjct: 32 LIYIVVASLFIRHPNVFHPLFVISF 56
>Z70287-10|CAA94299.2| 339|Caenorhabditis elegans Hypothetical
protein R09E10.4a protein.
Length = 339
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/40 (25%), Positives = 18/40 (45%)
Frame = -2
Query: 251 WLIIGFILHNIIKTKSAIYDNVVCPYFWTFINVCKITLAF 132
W++ +HN +YD + N+C+I+L F
Sbjct: 152 WILSDMAIHNFSNVSVPLYDTITNDDMHYITNLCEISLIF 191
>U88310-2|AAB42338.2| 635|Caenorhabditis elegans Hypothetical
protein C24G7.2 protein.
Length = 635
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 205 DFVLIILCNINPIISQPTNDI 267
DF LI +CN+NPI N+I
Sbjct: 147 DFPLITICNLNPIRKTYVNEI 167
>Z92785-4|CAB07201.2| 352|Caenorhabditis elegans Hypothetical
protein F31E9.3 protein.
Length = 352
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = -1
Query: 465 KQVYPKMAEEGGWLVKLDVDTVNGGMKLDPDFLVDFGAEPDGPA 334
++++PK+A W++K ++ +K+ FL D+ + P+G A
Sbjct: 286 REIFPKIANFESWIIKGNITDPPEIVKV---FLPDYNSYPEGSA 326
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,273,922
Number of Sequences: 27780
Number of extensions: 320371
Number of successful extensions: 912
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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