Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_P10
(576 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 24 1.2
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 23 2.9
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 22 3.8
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 22 3.8
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 22 3.8
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 6.6
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 6.6
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 6.6
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 6.6
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 8.7
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 8.7
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 8.7
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 23.8 bits (49), Expect = 1.2
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +2
Query: 344 SGSAPKSTRKSGSNFMPPFTVSTSNFTNHPPSSAI 448
S PKS+ S + +P +ST+ + PP+ +
Sbjct: 352 SPEPPKSSESSTGSSIPKLNLSTALMSQPPPNFGV 386
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 22.6 bits (46), Expect = 2.9
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = -2
Query: 257 VGWLIIGFILHNIIK 213
VG++IIGF+L I++
Sbjct: 156 VGYIIIGFLLAGIVQ 170
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 560 KARSSRVDHKCCNYHWMENA 501
KAR R++HK YH + N+
Sbjct: 487 KARQYRLNHKPFTYHIVVNS 506
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 560 KARSSRVDHKCCNYHWMENA 501
KAR R++HK YH + N+
Sbjct: 487 KARQYRLNHKPFTYHIVVNS 506
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 560 KARSSRVDHKCCNYHWMENA 501
KAR R++HK YH + N+
Sbjct: 113 KARQYRLNHKPFTYHIVVNS 132
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 51 FKYNALQNIKNI*CKLIYKSITF 119
+KYN N N CK +Y +I +
Sbjct: 96 YKYNYNNNNYNNNCKKLYYNINY 118
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 51 FKYNALQNIKNI*CKLIYKSITF 119
+KYN N N CK +Y +I +
Sbjct: 96 YKYNYNNNNYNNNCKKLYYNINY 118
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 51 FKYNALQNIKNI*CKLIYKSITF 119
+KYN N N CK +Y +I +
Sbjct: 96 YKYNYNNNNYNNNCKKLYYNINY 118
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 51 FKYNALQNIKNI*CKLIYKSITF 119
+KYN N N CK +Y +I +
Sbjct: 96 YKYNYNNNNYNNNCKKLYYNINY 118
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 560 KARSSRVDHKCCNYHWMENA 501
K R R++HK N+H NA
Sbjct: 489 KIRQYRLNHKPFNFHITINA 508
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 560 KARSSRVDHKCCNYHWMENA 501
K R R++HK N+H NA
Sbjct: 489 KIRQYRLNHKPFNFHITINA 508
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.0 bits (42), Expect = 8.7
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -3
Query: 232 YYIILSKRNLLYTI 191
+YII+ ++ L YT+
Sbjct: 225 FYIIIRRKTLFYTV 238
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,115
Number of Sequences: 438
Number of extensions: 4818
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -