Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_P09
(656 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q24342 Cluster: Fringe glycosyltransferase; n=5; Endopt... 40 0.053
UniRef50_Q4H3G9 Cluster: Fringe; n=1; Ciona intestinalis|Rep: Fr... 38 0.16
UniRef50_Q9Y644 Cluster: Beta-1,3-N-acetylglucosaminyltransferas... 38 0.21
UniRef50_Q4SMK0 Cluster: Chromosome 18 SCAF14547, whole genome s... 37 0.49
UniRef50_Q26DD8 Cluster: LPS biosynthesis protein wzxE; n=1; Fla... 36 0.65
UniRef50_Q4H3H0 Cluster: Fringe; n=4; Ciona intestinalis|Rep: Fr... 36 0.65
UniRef50_Q8NES3 Cluster: Beta-1,3-N-acetylglucosaminyltransferas... 36 0.86
UniRef50_UPI00015B5697 Cluster: PREDICTED: similar to L(3)mbt-li... 36 1.1
UniRef50_UPI00015614AA Cluster: PREDICTED: similar to Beta-1,3-N... 36 1.1
UniRef50_O00587 Cluster: Beta-1,3-N-acetylglucosaminyltransferas... 36 1.1
UniRef50_Q1LZD7 Cluster: MFNG protein; n=7; Amniota|Rep: MFNG pr... 35 1.5
UniRef50_UPI000065F9DB Cluster: Beta-1,3-N-acetylglucosaminyltra... 35 2.0
UniRef50_Q70LM0 Cluster: Putative fringe-related transmembrane g... 34 2.6
UniRef50_Q8JHF2 Cluster: Beta-1,3-N-acetylglucosaminyltransferas... 34 3.5
UniRef50_Q4H3G8 Cluster: Fringe; n=1; Ciona intestinalis|Rep: Fr... 33 6.0
UniRef50_Q4RGH5 Cluster: Chromosome 18 SCAF15100, whole genome s... 33 8.0
>UniRef50_Q24342 Cluster: Fringe glycosyltransferase; n=5;
Endopterygota|Rep: Fringe glycosyltransferase -
Drosophila melanogaster (Fruit fly)
Length = 412
Score = 39.9 bits (89), Expect = 0.053
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = -1
Query: 656 DTRYDPTRFLSLHCFLFPHXKFCP 585
D + DP RF SLHC LFP+ FCP
Sbjct: 387 DMKTDPKRFYSLHCQLFPYFSFCP 410
>UniRef50_Q4H3G9 Cluster: Fringe; n=1; Ciona intestinalis|Rep:
Fringe - Ciona intestinalis (Transparent sea squirt)
Length = 152
Score = 38.3 bits (85), Expect = 0.16
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = -1
Query: 644 DPTRFLSLHCFLFPHXKFC 588
DPTRF+SLHCFLF +FC
Sbjct: 133 DPTRFMSLHCFLFETAEFC 151
>UniRef50_Q9Y644 Cluster: Beta-1,3-N-acetylglucosaminyltransferase
radical fringe; n=21; Euteleostomi|Rep:
Beta-1,3-N-acetylglucosaminyltransferase radical fringe
- Homo sapiens (Human)
Length = 331
Score = 37.9 bits (84), Expect = 0.21
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 644 DPTRFLSLHCFLFPHXKFCPR 582
DPTRF S+HC L+P +CPR
Sbjct: 302 DPTRFKSIHCLLYPDTDWCPR 322
>UniRef50_Q4SMK0 Cluster: Chromosome 18 SCAF14547, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 18
SCAF14547, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 372
Score = 36.7 bits (81), Expect = 0.49
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -1
Query: 653 TRYDPTRFLSLHCFLFPHXKFCP 585
T+ DPTRF S+HC L+P +CP
Sbjct: 349 TQDDPTRFRSVHCLLYPDTHWCP 371
>UniRef50_Q26DD8 Cluster: LPS biosynthesis protein wzxE; n=1;
Flavobacteria bacterium BBFL7|Rep: LPS biosynthesis
protein wzxE - Flavobacteria bacterium BBFL7
Length = 421
Score = 36.3 bits (80), Expect = 0.65
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = -3
Query: 279 LSFYYMRYFLIRAYLIKTIL-ILGCDKYSLWLY*FYNVKNIVLISIFNFVLKNVYLNI*L 103
L+F ++ I+ YLI +L +L +S WL FY V+ I++ +FN+V VYL I L
Sbjct: 352 LAFQFIARNDIKKYLIAEVLSVLSFYLFSKWLLPFYGVEGILMAHLFNYV---VYLMIIL 408
Query: 102 SVI 94
++
Sbjct: 409 LLL 411
>UniRef50_Q4H3H0 Cluster: Fringe; n=4; Ciona intestinalis|Rep:
Fringe - Ciona intestinalis (Transparent sea squirt)
Length = 318
Score = 36.3 bits (80), Expect = 0.65
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -1
Query: 644 DPTRFLSLHCFLFPHXKFC 588
DPTRF++LHCFL+P C
Sbjct: 298 DPTRFITLHCFLYPTSSIC 316
>UniRef50_Q8NES3 Cluster: Beta-1,3-N-acetylglucosaminyltransferase
lunatic fringe; n=37; Coelomata|Rep:
Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
- Homo sapiens (Human)
Length = 379
Score = 35.9 bits (79), Expect = 0.86
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1
Query: 644 DPTRFLSLHCFLFPHXKFCPR 582
DP+RF S+HC L+P +CPR
Sbjct: 355 DPSRFRSIHCHLYPDTPWCPR 375
>UniRef50_UPI00015B5697 Cluster: PREDICTED: similar to L(3)mbt-like 3
(Drosophila); n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to L(3)mbt-like 3 (Drosophila) - Nasonia
vitripennis
Length = 1526
Score = 35.5 bits (78), Expect = 1.1
Identities = 14/22 (63%), Positives = 14/22 (63%)
Frame = -1
Query: 650 RYDPTRFLSLHCFLFPHXKFCP 585
R DP RF SLHC LFP CP
Sbjct: 1503 RDDPKRFRSLHCHLFPQASSCP 1524
>UniRef50_UPI00015614AA Cluster: PREDICTED: similar to
Beta-1,3-N-acetylglucosaminyltransferase radical fringe
(O-fucosylpeptide
3-beta-N-acetylglucosaminyltransferase), partial; n=1;
Equus caballus|Rep: PREDICTED: similar to
Beta-1,3-N-acetylglucosaminyltransferase radical fringe
(O-fucosylpeptide
3-beta-N-acetylglucosaminyltransferase), partial - Equus
caballus
Length = 371
Score = 35.5 bits (78), Expect = 1.1
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -1
Query: 644 DPTRFLSLHCFLFPHXKFCP 585
DPTRF S+HC L+P +CP
Sbjct: 334 DPTRFKSVHCLLYPDTDWCP 353
>UniRef50_O00587 Cluster: Beta-1,3-N-acetylglucosaminyltransferase
manic fringe; n=17; Euteleostomi|Rep:
Beta-1,3-N-acetylglucosaminyltransferase manic fringe -
Homo sapiens (Human)
Length = 321
Score = 35.5 bits (78), Expect = 1.1
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1
Query: 644 DPTRFLSLHCFLFPHXKFCPR 582
DP+RF SLHC L+P +CP+
Sbjct: 297 DPSRFRSLHCLLYPDTPWCPQ 317
>UniRef50_Q1LZD7 Cluster: MFNG protein; n=7; Amniota|Rep: MFNG
protein - Bos taurus (Bovine)
Length = 320
Score = 35.1 bits (77), Expect = 1.5
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1
Query: 644 DPTRFLSLHCFLFPHXKFCPR 582
DP+RF SLHC L+P +CP+
Sbjct: 297 DPSRFHSLHCLLYPDTPWCPQ 317
>UniRef50_UPI000065F9DB Cluster:
Beta-1,3-N-acetylglucosaminyltransferase manic fringe
(EC 2.4.1.222) (O-fucosylpeptide
3-beta-N-acetylglucosaminyltransferase).; n=1; Takifugu
rubripes|Rep: Beta-1,3-N-acetylglucosaminyltransferase
manic fringe (EC 2.4.1.222) (O-fucosylpeptide
3-beta-N-acetylglucosaminyltransferase). - Takifugu
rubripes
Length = 367
Score = 34.7 bits (76), Expect = 2.0
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -1
Query: 644 DPTRFLSLHCFLFPHXKFCP 585
DP+RF S+HC LFP +CP
Sbjct: 348 DPSRFKSVHCLLFPLTSWCP 367
>UniRef50_Q70LM0 Cluster: Putative fringe-related transmembrane
glycosyltransferase AmphiFringe; n=1; Branchiostoma
floridae|Rep: Putative fringe-related transmembrane
glycosyltransferase AmphiFringe - Branchiostoma floridae
(Florida lancelet) (Amphioxus)
Length = 381
Score = 34.3 bits (75), Expect = 2.6
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -1
Query: 644 DPTRFLSLHCFLFPHXKFC 588
DPTRF SLHC L+P+ C
Sbjct: 355 DPTRFKSLHCLLYPYVDLC 373
>UniRef50_Q8JHF2 Cluster: Beta-1,3-N-acetylglucosaminyltransferase
lunatic fringe; n=3; Clupeocephala|Rep:
Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
- Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 374
Score = 33.9 bits (74), Expect = 3.5
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -1
Query: 644 DPTRFLSLHCFLFPHXKFCP 585
DP+RF S+HC L+P +CP
Sbjct: 350 DPSRFKSVHCLLYPDTPWCP 369
>UniRef50_Q4H3G8 Cluster: Fringe; n=1; Ciona intestinalis|Rep:
Fringe - Ciona intestinalis (Transparent sea squirt)
Length = 250
Score = 33.1 bits (72), Expect = 6.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 656 DTRYDPTRFLSLHCFLFPHXKFC 588
+T DP+RF SLHC +FP C
Sbjct: 222 NTDLDPSRFYSLHCLIFPGLPMC 244
>UniRef50_Q4RGH5 Cluster: Chromosome 18 SCAF15100, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 18 SCAF15100, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 416
Score = 32.7 bits (71), Expect = 8.0
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -1
Query: 644 DPTRFLSLHCFLFPHXKFCP 585
DP+RF S+HC L+P +CP
Sbjct: 397 DPSRFKSVHCALYPLTSWCP 416
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 516,439,240
Number of Sequences: 1657284
Number of extensions: 8528517
Number of successful extensions: 16295
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 15781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16278
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49586781480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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