Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_P09
         (656 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U94353-1|AAC51359.1|  191|Homo sapiens radical fringe protein.         38   0.032
BC014851-1|AAH14851.1|  250|Homo sapiens LFNG protein protein.         36   0.13 
Z93096-1|CAB07511.1|  321|Homo sapiens manic fringe homolog (Dro...    36   0.17 
U94352-1|AAC51358.1|  321|Homo sapiens manic fringe precursor pr...    36   0.17 
CR456518-1|CAG30404.1|  321|Homo sapiens MFNG protein.                 36   0.17 
BC094814-1|AAH94814.1|  321|Homo sapiens MFNG O-fucosylpeptide 3...    36   0.17 
BC044581-1|AAH44581.1|  523|Homo sapiens PKD2L2 protein protein.       32   1.6  

>U94353-1|AAC51359.1|  191|Homo sapiens radical fringe protein.
          Length = 191

 Score = 37.9 bits (84), Expect = 0.032
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = -1

Query: 644 DPTRFLSLHCFLFPHXKFCPR 582
           DPTRF S+HC L+P   +CPR
Sbjct: 162 DPTRFKSIHCLLYPDTDWCPR 182


>BC014851-1|AAH14851.1|  250|Homo sapiens LFNG protein protein.
          Length = 250

 Score = 35.9 bits (79), Expect = 0.13
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -1

Query: 644 DPTRFLSLHCFLFPHXKFCPR 582
           DP+RF S+HC L+P   +CPR
Sbjct: 226 DPSRFRSIHCHLYPDTPWCPR 246


>Z93096-1|CAB07511.1|  321|Homo sapiens manic fringe homolog
           (Drosophila) protein.
          Length = 321

 Score = 35.5 bits (78), Expect = 0.17
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -1

Query: 644 DPTRFLSLHCFLFPHXKFCPR 582
           DP+RF SLHC L+P   +CP+
Sbjct: 297 DPSRFRSLHCLLYPDTPWCPQ 317


>U94352-1|AAC51358.1|  321|Homo sapiens manic fringe precursor
           protein.
          Length = 321

 Score = 35.5 bits (78), Expect = 0.17
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -1

Query: 644 DPTRFLSLHCFLFPHXKFCPR 582
           DP+RF SLHC L+P   +CP+
Sbjct: 297 DPSRFRSLHCLLYPDTPWCPQ 317


>CR456518-1|CAG30404.1|  321|Homo sapiens MFNG protein.
          Length = 321

 Score = 35.5 bits (78), Expect = 0.17
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -1

Query: 644 DPTRFLSLHCFLFPHXKFCPR 582
           DP+RF SLHC L+P   +CP+
Sbjct: 297 DPSRFRSLHCLLYPDTPWCPQ 317


>BC094814-1|AAH94814.1|  321|Homo sapiens MFNG O-fucosylpeptide
           3-beta-N-acetylglucosaminyltransferase protein.
          Length = 321

 Score = 35.5 bits (78), Expect = 0.17
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -1

Query: 644 DPTRFLSLHCFLFPHXKFCPR 582
           DP+RF SLHC L+P   +CP+
Sbjct: 297 DPSRFRSLHCLLYPDTPWCPQ 317


>BC044581-1|AAH44581.1|  523|Homo sapiens PKD2L2 protein protein.
          Length = 523

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 26/102 (25%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
 Frame = -3

Query: 396 MFKFKTQISHSFKIQTCNFYS*IMSTYMYAQ*FFMLVCSLSFYYMRYFLIRAYLIKTILI 217
           +F F TQ     K     ++    S + + +   +L+C ++  +  Y+ ++ +L+   L+
Sbjct: 293 LFVFTTQEVKKIKEFKSAYFK---SIWNWLELLLLLLCFVAVSFNTYYNVQIFLLLGQLL 349

Query: 216 LGCDKYS------LWLY*FYNVKNIVLISIFNFVLKNVYLNI 109
              +KYS       W + +YN  NI+ I+IF   +KN++L I
Sbjct: 350 KSTEKYSDFYFLACW-HIYYN--NIIAITIFFAWIKNMFLAI 388


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,797,960
Number of Sequences: 237096
Number of extensions: 1263256
Number of successful extensions: 5135
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5134
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)