Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_P07
(615 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016687-2|AAC48091.2| 280|Caenorhabditis elegans Hypothetical ... 104 6e-23
DQ178242-1|ABA18181.1| 578|Caenorhabditis elegans Frizzled homo... 33 0.21
AF016413-2|ABA54421.1| 578|Caenorhabditis elegans Caenorhabditi... 33 0.21
AF016413-1|ABA54422.1| 550|Caenorhabditis elegans Caenorhabditi... 33 0.21
AC025723-10|AAK29940.1| 691|Caenorhabditis elegans Mammalian fe... 33 0.21
AB026113-1|BAA84678.1| 550|Caenorhabditis elegans Cfz2 protein. 33 0.21
AJ345015-1|CAC87812.1| 577|Caenorhabditis elegans FEH-1 protein... 32 0.28
AC025723-11|AAN84832.2| 554|Caenorhabditis elegans Mammalian fe... 32 0.28
AC025723-9|AAN84831.1| 640|Caenorhabditis elegans Mammalian fe6... 32 0.28
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 32 0.37
AF036706-1|AAK39287.1| 196|Caenorhabditis elegans Hypothetical ... 32 0.37
AC087082-1|AAG37982.2| 157|Caenorhabditis elegans Hypothetical ... 30 1.1
Z81056-8|CAB02907.2| 307|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z73975-2|CAA98275.1| 104|Caenorhabditis elegans Hypothetical pr... 29 2.0
AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain pro... 29 2.0
AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain pro... 29 2.0
Z81552-3|CAB04486.1| 470|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z68105-3|CAA92121.2| 442|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z46241-4|CAA86318.1| 837|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF045642-2|AAC02580.1| 643|Caenorhabditis elegans Dynein chain,... 28 6.1
AL031633-4|CAA21022.1| 260|Caenorhabditis elegans Hypothetical ... 27 8.1
>AF016687-2|AAC48091.2| 280|Caenorhabditis elegans Hypothetical
protein T21D12.3 protein.
Length = 280
Score = 104 bits (249), Expect = 6e-23
Identities = 49/125 (39%), Positives = 71/125 (56%), Gaps = 2/125 (1%)
Frame = -3
Query: 613 EEIIAEDYDSKPNXNGKDEPWEGFVDPVKGHRGCPNKSNIYHECXTFCIKRWKQG--KLV 440
EE+IAE+Y+ +P + F + G GCPNK N YH C FC W G +
Sbjct: 21 EEVIAENYEKEPEK-------KSFEENSAGAPGCPNKWNQYHVCLEFCYDHWGDGTPEYR 73
Query: 439 PTETYLEHKEKVLELWPLPPGWEEVFDEGYGQHYFWNVHTNLVSWIPPGHPRAVPTESAA 260
E Y+++K ++L +PLP W EV+DEG ++YFWN T+ V W P HPRA+ ++ A
Sbjct: 74 LPERYVQNKNRMLAKFPLPENWVEVYDEGLAKYYFWNKTTDEVCWYSPRHPRAIISDPAP 133
Query: 259 QLREE 245
++ E
Sbjct: 134 RIARE 138
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -3
Query: 103 RVKDNDLDPMDPAXYSDVPRGNWTSGLDTHXKTG 2
R K +DPMDPA Y D P G W+ GL TG
Sbjct: 213 RAKRKGIDPMDPAAYGDAPVGKWSDGLRVDQVTG 246
>DQ178242-1|ABA18181.1| 578|Caenorhabditis elegans Frizzled homolog
protein.
Length = 578
Score = 32.7 bits (71), Expect = 0.21
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 428 CLSRYQFTLLPSFNTKSXTFMINITFIRASSMAFDRIDKAFPRLI-FSIXVRLTVIIFCN 604
CL Q L+ FN + I ++ + + F RI FP L+ F + V VI FCN
Sbjct: 363 CLPAIQTVLVIVFNAIDGDPITGICYVGNTDLQFQRIFVLFPLLVYFIVGVLFLVIGFCN 422
>AF016413-2|ABA54421.1| 578|Caenorhabditis elegans Caenorhabditis
frizzled homologprotein 2, isoform a protein.
Length = 578
Score = 32.7 bits (71), Expect = 0.21
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 428 CLSRYQFTLLPSFNTKSXTFMINITFIRASSMAFDRIDKAFPRLI-FSIXVRLTVIIFCN 604
CL Q L+ FN + I ++ + + F RI FP L+ F + V VI FCN
Sbjct: 363 CLPAIQTVLVIVFNAIDGDPITGICYVGNTDLQFQRIFVLFPLLVYFIVGVLFLVIGFCN 422
>AF016413-1|ABA54422.1| 550|Caenorhabditis elegans Caenorhabditis
frizzled homologprotein 2, isoform b protein.
Length = 550
Score = 32.7 bits (71), Expect = 0.21
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 428 CLSRYQFTLLPSFNTKSXTFMINITFIRASSMAFDRIDKAFPRLI-FSIXVRLTVIIFCN 604
CL Q L+ FN + I ++ + + F RI FP L+ F + V VI FCN
Sbjct: 363 CLPAIQTVLVIVFNAIDGDPITGICYVGNTDLQFQRIFVLFPLLVYFIVGVLFLVIGFCN 422
>AC025723-10|AAK29940.1| 691|Caenorhabditis elegans Mammalian fe65
homolog protein1, isoform a protein.
Length = 691
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -3
Query: 388 LPPGWEEVFDEGYGQHYFWNVHTNLVSWIPPGHPRAV 278
LPPGWE+ ++ G Y+W+V + + PP R V
Sbjct: 265 LPPGWEK-HEDPQGYSYYWHVDSGTIQRQPPPPVRDV 300
>AB026113-1|BAA84678.1| 550|Caenorhabditis elegans Cfz2 protein.
Length = 550
Score = 32.7 bits (71), Expect = 0.21
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 428 CLSRYQFTLLPSFNTKSXTFMINITFIRASSMAFDRIDKAFPRLI-FSIXVRLTVIIFCN 604
CL Q L+ FN + I ++ + + F RI FP L+ F + V VI FCN
Sbjct: 363 CLPAIQTVLVIVFNAIDGDPITGICYVGNTDLQFQRIFVLFPLLVYFIVGVLFLVIGFCN 422
>AJ345015-1|CAC87812.1| 577|Caenorhabditis elegans FEH-1 protein
protein.
Length = 577
Score = 32.3 bits (70), Expect = 0.28
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 388 LPPGWEEVFDEGYGQHYFWNVHTNLVSWIPP 296
LPPGWE+ ++ G Y+W+V + + PP
Sbjct: 147 LPPGWEK-HEDPQGYSYYWHVDSGTIQRQPP 176
>AC025723-11|AAN84832.2| 554|Caenorhabditis elegans Mammalian fe65
homolog protein1, isoform c protein.
Length = 554
Score = 32.3 bits (70), Expect = 0.28
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 388 LPPGWEEVFDEGYGQHYFWNVHTNLVSWIPP 296
LPPGWE+ ++ G Y+W+V + + PP
Sbjct: 124 LPPGWEK-HEDPQGYSYYWHVDSGTIQRQPP 153
>AC025723-9|AAN84831.1| 640|Caenorhabditis elegans Mammalian fe65
homolog protein1, isoform b protein.
Length = 640
Score = 32.3 bits (70), Expect = 0.28
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 388 LPPGWEEVFDEGYGQHYFWNVHTNLVSWIPP 296
LPPGWE+ ++ G Y+W+V + + PP
Sbjct: 235 LPPGWEK-HEDPQGYSYYWHVDSGTIQRQPP 264
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 31.9 bits (69), Expect = 0.37
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -3
Query: 388 LPPGWEEVFDEGYGQHY 338
LPPGWE+V D+ YG Y
Sbjct: 332 LPPGWEQVDDQNYGTFY 348
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -3
Query: 388 LPPGWEEVFDEGYGQHYFWNVHTNLVSWIPP 296
LPP WE + E G YF + +T +W P
Sbjct: 300 LPPNWETAYTEN-GDKYFIDHNTGTTTWDDP 329
>AF036706-1|AAK39287.1| 196|Caenorhabditis elegans Hypothetical
protein T07A9.1 protein.
Length = 196
Score = 31.9 bits (69), Expect = 0.37
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -3
Query: 103 RVKDNDLDPMDPAXYSDVPRGNWTSGLDTHXKTG 2
R K +DPMDP + P W+ GL TG
Sbjct: 121 RAKRKGIDPMDPGAHGGAPVEKWSDGLRVDHVTG 154
>AC087082-1|AAG37982.2| 157|Caenorhabditis elegans Hypothetical
protein Y92H12BM.1 protein.
Length = 157
Score = 30.3 bits (65), Expect = 1.1
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -3
Query: 376 WEEVFDEGYGQHYFWNVHTNLVSWIPP 296
W E+FD G++Y++N +++ W P
Sbjct: 8 WWELFDSKTGRYYYYNASSSVTKWQKP 34
>Z81056-8|CAB02907.2| 307|Caenorhabditis elegans Hypothetical
protein F09F3.12 protein.
Length = 307
Score = 29.9 bits (64), Expect = 1.5
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = -1
Query: 510 LIKVIFIM--NVXLFVLK-DGSKVNWYRLRHI*NTRRKF*SYGPCHQDGKKCLMKVMVNI 340
+I ++FI+ N LF++ G+ +N Y L +TRR G K CL+K + NI
Sbjct: 1 MITMVFIIFANFLLFIISFSGTILNSYLLYKF-STRR-----GVISGFYKLCLVKTVPNI 54
Query: 339 IFGMCTLIW 313
+ C LIW
Sbjct: 55 VVCACFLIW 63
>Z73975-2|CAA98275.1| 104|Caenorhabditis elegans Hypothetical
protein T06E8.2 protein.
Length = 104
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 320 SVHIPKIMLTITFIKHFFP 376
SVH P I+LTITF +FP
Sbjct: 82 SVHSPSILLTITFALSYFP 100
>AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform b
protein.
Length = 792
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 388 LPPGWEEVFDEGYGQHYFWNVHTNLVSWIPP 296
LP GWE FD+ YG+ Y+ + T +W P
Sbjct: 221 LPDGWEMRFDQ-YGRKYYVDHTTKSTTWERP 250
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = -3
Query: 397 LWPLPPGWEEVFDEGYGQHYFWNVHTNLVSWIPP 296
L PLP GWE+ D + YF N W P
Sbjct: 323 LGPLPEGWEKRQDPNTSRMYFVNHVNRTTQWEDP 356
>AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform a
protein.
Length = 794
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 388 LPPGWEEVFDEGYGQHYFWNVHTNLVSWIPP 296
LP GWE FD+ YG+ Y+ + T +W P
Sbjct: 221 LPDGWEMRFDQ-YGRKYYVDHTTKSTTWERP 250
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = -3
Query: 397 LWPLPPGWEEVFDEGYGQHYFWNVHTNLVSWIPP 296
L PLP GWE+ D + YF N W P
Sbjct: 323 LGPLPEGWEKRQDPNTSRMYFVNHVNRTTQWEDP 356
>Z81552-3|CAB04486.1| 470|Caenorhabditis elegans Hypothetical
protein F56G4.4 protein.
Length = 470
Score = 28.7 bits (61), Expect = 3.5
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -3
Query: 343 HYFWNVHTNLVSWIPPGH 290
HY+WN+ N W P H
Sbjct: 195 HYYWNLFDNSTRWTAPAH 212
>Z68105-3|CAA92121.2| 442|Caenorhabditis elegans Hypothetical
protein F13E6.4 protein.
Length = 442
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 403 LELWPLPPGWEEVFDEGYGQHYFWNVHTNLVSWIPP 296
+E P+P GWE +D G YF + ++ +W P
Sbjct: 200 VEQLPMPQGWEMCYDSD-GVRYFKDHNSKTTTWDDP 234
>Z46241-4|CAA86318.1| 837|Caenorhabditis elegans Hypothetical
protein C38D4.5 protein.
Length = 837
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -3
Query: 379 GWEEVFDEGYGQHYFWNVHTNLVSWIPPGHPRAVPTESAAQLREER 242
GW E ++ G+ +F+N T WIPP R P + LR R
Sbjct: 101 GWFE-YETDVGRTFFFNKETGKSQWIPPRFIR-TPAQVQEFLRATR 144
>AF045642-2|AAC02580.1| 643|Caenorhabditis elegans Dynein chain,
light intermediateprotein 1 protein.
Length = 643
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 223 RRLLSSDVLRAIVRQIP*AQHGDVRVVSTKPD*CAHSKNNVD 348
R+ LSS+ + I+RQ+ + VR S P +HS N+VD
Sbjct: 50 RQTLSSNEVEDILRQVGISTEPTVREESPAPPPGSHSDNHVD 91
>AL031633-4|CAA21022.1| 260|Caenorhabditis elegans Hypothetical
protein Y39A1A.6 protein.
Length = 260
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -3
Query: 595 DYDSKPNXNGKDEPWEGFVDPVKGHRGCPNKSNIYHE 485
D + KPN + EGFV+P+KG+ P K Y++
Sbjct: 68 DLEKKPNLD------EGFVNPLKGYGMTPEKWEYYNK 98
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,599,512
Number of Sequences: 27780
Number of extensions: 252000
Number of successful extensions: 748
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 742
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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