Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_P06
         (674 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       24   1.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.3  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    24   1.3  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   1.7  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   1.7  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   4.0  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   7.0  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   7.0  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/24 (37%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -1

Query: 290 SYIHIKRPQ-WTCKCCKFLTNWRH 222
           S +HI+  +  TC  C F+T ++H
Sbjct: 221 SKVHIREDKRLTCPKCPFITEYKH 244


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 13/46 (28%), Positives = 26/46 (56%)
 Frame = -3

Query: 441 NYMTFVLIILYNITVYTVKLSHKWQYIQVVVTY*QLVKMAK*RYLI 304
           N+ +  L+ILYNI +  + +S    ++ +V+    ++ + K  YLI
Sbjct: 35  NFRSSKLLILYNIILQVLFVSFVSYWLYLVLEADDMLPIYKNTYLI 80


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 13/46 (28%), Positives = 26/46 (56%)
 Frame = -3

Query: 441 NYMTFVLIILYNITVYTVKLSHKWQYIQVVVTY*QLVKMAK*RYLI 304
           N+ +  L+ILYNI +  + +S    ++ +V+    ++ + K  YLI
Sbjct: 53  NFRSSKLLILYNIILQVLFVSFVSYWLYLVLEADDMLPIYKNTYLI 98


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
 Frame = -3

Query: 504 YTWLGILQ---DVMWLLLRHMEMLNYMTFVLIILYNITVYTVKLSHKWQYIQVVVTY 343
           Y  LGI+Q      +  +     L + ++   + Y  T Y+ KLS  ++YI  +  Y
Sbjct: 59  YKLLGIIQFPISAHFSFMSRFLCLPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMAGY 115


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
 Frame = -3

Query: 504 YTWLGILQ---DVMWLLLRHMEMLNYMTFVLIILYNITVYTVKLSHKWQYIQVVVTY 343
           Y  LGI+Q      +  +     L + ++   + Y  T Y+ KLS  ++YI  +  Y
Sbjct: 15  YKLLGIIQFPISAHFSFMSRFLCLPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMAGY 71


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -2

Query: 247 VNFSPTGDTFSSAGDDKLVFIW 182
           VN  P G+ F   GD+  +  W
Sbjct: 365 VNMLPKGEIFHMGGDEVYIPCW 386


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -2

Query: 634 VRCARMSNDGSIIASCSDDKSTKL 563
           + CA +    +I++ CS   ST +
Sbjct: 333 LHCAAVGGSANIMSGCSTSTSTNI 356


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 6/17 (35%), Positives = 12/17 (70%), Gaps = 2/17 (11%)
 Frame = +2

Query: 359 WMY--CHLCDSFTVYTV 403
           W++  CH+C+  T++ V
Sbjct: 109 WLHQICHICELHTIFLV 125


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,174
Number of Sequences: 336
Number of extensions: 3358
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)