Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_P06
         (674 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    23   6.7  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   8.8  
AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transpor...    23   8.8  

>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = -2

Query: 403 YSIHSEAVTQVAIHPSGSYILTAS---KDGKMKILDLLEG 293
           Y+  +  +T +     GS+ +  S    DG+M ++DL+ G
Sbjct: 266 YAARAAVMTMMGSFGGGSFSIIYSMINNDGRMDVVDLING 305


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 9/32 (28%), Positives = 20/32 (62%)
 Frame = -3

Query: 483 QDVMWLLLRHMEMLNYMTFVLIILYNITVYTV 388
           ++ M  L+    ++N + FV+++L  IT+Y +
Sbjct: 138 REFMLKLIAIRMLVNLVVFVILLLAAITIYVL 169


>AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transporter
           protein.
          Length = 570

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 517 KGHGLHLAWHP 485
           KGHGL + W P
Sbjct: 233 KGHGLRVVWFP 243


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,928
Number of Sequences: 2352
Number of extensions: 13498
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)